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The map label for this gene is exeD [H]

Identifier: 197106378

GI number: 197106378

Start: 3332167

End: 3334005

Strand: Direct

Name: exeD [H]

Synonym: PHZ_c2917

Alternate gene names: 197106378

Gene position: 3332167-3334005 (Clockwise)

Preceding gene: 197106374

Following gene: 197106379

Centisome position: 83.38

GC content: 73.95

Gene sequence:

>1839_bases
ATGCAGGAGGCCGCAGTCGCGGCCCTGCGCCGCAACGATCCCGCGTCCGCGAACCGGCTGCTGACCCGGGCGCTGCAGCG
CGATCCCGAGAATCCGACGCTGCATGCGCTCAACGGCCTGGCCCACCACCAGCGGGTCCGCGACGGCCAGCGCGAGCACT
TCCAGCTCGCCGAAACGGCCTATCTGGTGTCGCTTCAGAGCCAGCGGGACTCCTTTCCCGTGGCCCTGGAACTGGCCCGG
CTCTACGTCGAGAACGGCCGCTACGGCGCCGGAAAACGCGCCGCCGCCTACGCCCTGGACCTGGAGCCGGGCTCGGCGGA
CGCCCTGCAGGCGCTCGCGGCGGCGGCCTACTACGACGGGGACCTCGAACTGGCGGCCTGGGCCGCGGCGGAGGCGAGAC
CGGACGACGCCGCGATGGCCCCCATCCGCCCGCTCGTGTTCGCCGCCGCGGGACTGCCCGCCGAGGCGGACCAGGCCCTC
GCCCAGGGGCTGGCCGCGGGCGCCATTCCCGACCAGCGCCGCGAGGCCCTGGCGCGGCGGCTCGGCCAATGGCGCGATCT
GCATGTGCAGGCCGCCTTCCAGCGCCCGGCCGGCACGCTTCCTGACGCGCCGCCCGGCGCCATCGGAGGGGCCGCCCCCG
CGCAGGCGCCCGCATCCCTGCCCGGACTCCCGCTTGCGGACCCGCCGGACGCGCCGGCGCCGGAGCCCGCGTCGGGCGCG
GCGAGCTACGCCTGGTGGGACTGCCAGCAGCAGCTGAACCCCGGCGGATTCGCCGCCCCGCCGCCTTCGTTCAGCTACGG
CTACGGCGCCTCGACGTCGGCGGACGAGACCTCGGCCCTGCCCGCTCTGCCGGCGCCGTGCCGCGGCCAGCCCCTGCCGC
GGATGGCGATGGTCGACGCCGTGATCCTGCGCACCGACGACACCCGCTCGGCCACGAACGGGGTGAACCTGCTGAAGAAC
CTGTCGGCCTACGTCGGCAACGGGATCACCGTCACGCGGAGCTGGAGCACCGGCCAGCCGGCCACCAAGACCAGCGTCGT
CACCCAGAACCTGGGGCTCGGCTCGTCGGTCGGCGGGGTGCTCTCGTACTCGCTGAACATCGCCAACGCGACCGAGCAGC
GGGCCGAGATCCTGGCGCAGCCGACCCTGCTCGCGCTGGACCGCCAGCCGGCGCAGTTCTTCTCGGGCTCGAACGTCACC
ATCGCGCTGAACGGCGGCCCGGGCAGCTACGGCAGCGTGCAGAACCAGCCGGTGGGCGTGAGCCTGTCGGTGACGCCGAC
CTTCGTCGACGACGACAGCATGCTGGTCAGCGTCAAGGCCGTCCGCTCGTTCTTCGAGGAAACCGCCGACAGCGCCACCT
TCGTCCAGTCGGTCCAGACCTCGCGCAACATGGTGACGGCCAACGTCCTGCTGCGCTTCGACCAGACGCTGGTCCTGTCG
GGCCTGAGCGAACGCGAGGTGACCAGCATCGACAGCCGCACGCCGCTGCTGGGCGACATCCCCGGCGTCCAGCACCTGTT
CGCCACCAAGGAGGACCGCGACTACACGCGCTCGGTGGTGATCATGCTGACCCCGCGCCGGGTTCCCGGGCTGGCGGCGC
AGCTCGCGGAGGCGGCCGCGGCGGCGACGCCCGAGCCCGCCGCCCTGCGCGACGCCCGGGCCCGGGCCCGGACCGGCCTG
GCCGAACAGTGGCCGAACCTCACCGCGGCGCTGGCGCACATGGACCGCAACCGCCTGTTCCGCGCCCTGCGCGCCGGCGA
CATCGACGTGCGCGGCTGGCGCGAGCGGGACCGCGTCGAGCAGGCGCTGAACGACTTCACCCGGCTTCTCGCCTTCTGA

Upstream 100 bases:

>100_bases
GGCGATCGCACTGGCCGCCGGCGTGGCGACGGGCTGCGCCACCACCGGCTTCGCGGCGCCGCGACGGGGCCCGCCGGCGC
AGGCCGGAGCCGCCGAGCAG

Downstream 100 bases:

>100_bases
GTCCGACCCAACACCGAAAAGGGGACCTCATGCTGTTCAGGATCGATCGACTGCTGGCGGGCGCCGGATGCGCCCTCGCC
GCCTTGGGCTCCGCAGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 612

Protein sequence:

>612_residues
MQEAAVAALRRNDPASANRLLTRALQRDPENPTLHALNGLAHHQRVRDGQREHFQLAETAYLVSLQSQRDSFPVALELAR
LYVENGRYGAGKRAAAYALDLEPGSADALQALAAAAYYDGDLELAAWAAAEARPDDAAMAPIRPLVFAAAGLPAEADQAL
AQGLAAGAIPDQRREALARRLGQWRDLHVQAAFQRPAGTLPDAPPGAIGGAAPAQAPASLPGLPLADPPDAPAPEPASGA
ASYAWWDCQQQLNPGGFAAPPPSFSYGYGASTSADETSALPALPAPCRGQPLPRMAMVDAVILRTDDTRSATNGVNLLKN
LSAYVGNGITVTRSWSTGQPATKTSVVTQNLGLGSSVGGVLSYSLNIANATEQRAEILAQPTLLALDRQPAQFFSGSNVT
IALNGGPGSYGSVQNQPVGVSLSVTPTFVDDDSMLVSVKAVRSFFEETADSATFVQSVQTSRNMVTANVLLRFDQTLVLS
GLSEREVTSIDSRTPLLGDIPGVQHLFATKEDRDYTRSVVIMLTPRRVPGLAAQLAEAAAAATPEPAALRDARARARTGL
AEQWPNLTAALAHMDRNRLFRALRAGDIDVRGWRERDRVEQALNDFTRLLAF

Sequences:

>Translated_612_residues
MQEAAVAALRRNDPASANRLLTRALQRDPENPTLHALNGLAHHQRVRDGQREHFQLAETAYLVSLQSQRDSFPVALELAR
LYVENGRYGAGKRAAAYALDLEPGSADALQALAAAAYYDGDLELAAWAAAEARPDDAAMAPIRPLVFAAAGLPAEADQAL
AQGLAAGAIPDQRREALARRLGQWRDLHVQAAFQRPAGTLPDAPPGAIGGAAPAQAPASLPGLPLADPPDAPAPEPASGA
ASYAWWDCQQQLNPGGFAAPPPSFSYGYGASTSADETSALPALPAPCRGQPLPRMAMVDAVILRTDDTRSATNGVNLLKN
LSAYVGNGITVTRSWSTGQPATKTSVVTQNLGLGSSVGGVLSYSLNIANATEQRAEILAQPTLLALDRQPAQFFSGSNVT
IALNGGPGSYGSVQNQPVGVSLSVTPTFVDDDSMLVSVKAVRSFFEETADSATFVQSVQTSRNMVTANVLLRFDQTLVLS
GLSEREVTSIDSRTPLLGDIPGVQHLFATKEDRDYTRSVVIMLTPRRVPGLAAQLAEAAAAATPEPAALRDARARARTGL
AEQWPNLTAALAHMDRNRLFRALRAGDIDVRGWRERDRVEQALNDFTRLLAF
>Mature_612_residues
MQEAAVAALRRNDPASANRLLTRALQRDPENPTLHALNGLAHHQRVRDGQREHFQLAETAYLVSLQSQRDSFPVALELAR
LYVENGRYGAGKRAAAYALDLEPGSADALQALAAAAYYDGDLELAAWAAAEARPDDAAMAPIRPLVFAAAGLPAEADQAL
AQGLAAGAIPDQRREALARRLGQWRDLHVQAAFQRPAGTLPDAPPGAIGGAAPAQAPASLPGLPLADPPDAPAPEPASGA
ASYAWWDCQQQLNPGGFAAPPPSFSYGYGASTSADETSALPALPAPCRGQPLPRMAMVDAVILRTDDTRSATNGVNLLKN
LSAYVGNGITVTRSWSTGQPATKTSVVTQNLGLGSSVGGVLSYSLNIANATEQRAEILAQPTLLALDRQPAQFFSGSNVT
IALNGGPGSYGSVQNQPVGVSLSVTPTFVDDDSMLVSVKAVRSFFEETADSATFVQSVQTSRNMVTANVLLRFDQTLVLS
GLSEREVTSIDSRTPLLGDIPGVQHLFATKEDRDYTRSVVIMLTPRRVPGLAAQLAEAAAAATPEPAALRDARARARTGL
AEQWPNLTAALAHMDRNRLFRALRAGDIDVRGWRERDRVEQALNDFTRLLAF

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=190, Percent_Identity=26.8421052631579, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 64861; Mature: 64861

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEAAVAALRRNDPASANRLLTRALQRDPENPTLHALNGLAHHQRVRDGQREHFQLAETA
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLVSLQSQRDSFPVALELARLYVENGRYGAGKRAAAYALDLEPGSADALQALAAAAYYDG
HEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
DLELAAWAAAEARPDDAAMAPIRPLVFAAAGLPAEADQALAQGLAAGAIPDQRREALARR
CCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGQWRDLHVQAAFQRPAGTLPDAPPGAIGGAAPAQAPASLPGLPLADPPDAPAPEPASGA
HCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASYAWWDCQQQLNPGGFAAPPPSFSYGYGASTSADETSALPALPAPCRGQPLPRMAMVDA
CCHHEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCE
VILRTDDTRSATNGVNLLKNLSAYVGNGITVTRSWSTGQPATKTSVVTQNLGLGSSVGGV
EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCC
LSYSLNIANATEQRAEILAQPTLLALDRQPAQFFSGSNVTIALNGGPGSYGSVQNQPVGV
EEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCEE
SLSVTPTFVDDDSMLVSVKAVRSFFEETADSATFVQSVQTSRNMVTANVLLRFDQTLVLS
EEEECCEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHHHHCHHHHHC
GLSEREVTSIDSRTPLLGDIPGVQHLFATKEDRDYTRSVVIMLTPRRVPGLAAQLAEAAA
CCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH
AATPEPAALRDARARARTGLAEQWPNLTAALAHMDRNRLFRALRAGDIDVRGWRERDRVE
HCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
QALNDFTRLLAF
HHHHHHHHHHCC
>Mature Secondary Structure
MQEAAVAALRRNDPASANRLLTRALQRDPENPTLHALNGLAHHQRVRDGQREHFQLAETA
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLVSLQSQRDSFPVALELARLYVENGRYGAGKRAAAYALDLEPGSADALQALAAAAYYDG
HEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
DLELAAWAAAEARPDDAAMAPIRPLVFAAAGLPAEADQALAQGLAAGAIPDQRREALARR
CCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGQWRDLHVQAAFQRPAGTLPDAPPGAIGGAAPAQAPASLPGLPLADPPDAPAPEPASGA
HCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASYAWWDCQQQLNPGGFAAPPPSFSYGYGASTSADETSALPALPAPCRGQPLPRMAMVDA
CCHHEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCE
VILRTDDTRSATNGVNLLKNLSAYVGNGITVTRSWSTGQPATKTSVVTQNLGLGSSVGGV
EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCC
LSYSLNIANATEQRAEILAQPTLLALDRQPAQFFSGSNVTIALNGGPGSYGSVQNQPVGV
EEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCEE
SLSVTPTFVDDDSMLVSVKAVRSFFEETADSATFVQSVQTSRNMVTANVLLRFDQTLVLS
EEEECCEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEHHHHHHCHHHHHC
GLSEREVTSIDSRTPLLGDIPGVQHLFATKEDRDYTRSVVIMLTPRRVPGLAAQLAEAAA
CCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH
AATPEPAALRDARARARTGLAEQWPNLTAALAHMDRNRLFRALRAGDIDVRGWRERDRVE
HCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
QALNDFTRLLAF
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]