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The map label for this gene is racX [H]

Identifier: 197106374

GI number: 197106374

Start: 3328401

End: 3329114

Strand: Direct

Name: racX [H]

Synonym: PHZ_c2913

Alternate gene names: 197106374

Gene position: 3328401-3329114 (Clockwise)

Preceding gene: 197106373

Following gene: 197106378

Centisome position: 83.29

GC content: 72.83

Gene sequence:

>714_bases
ATGAGCGAGGACGACGACGGCTCCCTCACCCTGGGCGTGCTGGGCGGCATGGGCCCGGCGGCGACGCTGGACTTCCTGGC
CAAGCTGCAGGCCTACACCCCGGCCAAGCGCGACCAGGACCACATCCGGGTGATCGCCGACATCAACCCCAAGGCGCCGG
ACCGCAACGTGCCCGGCTCGGGCGCGGGCAACGTCCTGGCCGAGATGGCCGGGGCCCTGCGCGGGGCGGGCGCCGACGTG
CTGGCCATGCCCTGCAACACCGCCCACGCCCATTCCGACCTGATCCAGCGGGCCTCGGGCCTGCCGCTGATCGACATGAT
CGATCTGGCCGCCGAGGCGGCGGCGGAGTCGGGCGCCGTGCGGGCGGGCGTCCTGGGCACCAAGGGCGCCCTGAAGCTCT
ACCGGGAATACCTGGCCGCCCGCGGCCTCGGCATGGTCAGCCTGCCGCCCGAGCGGCAGGAGGCGTTCATGGAGACGCTC
TACCGGATCAAGGGCGGCGATCTCAGCCCCGAGGTTTCGCGCCAGATGAAGGCCTTCGCCGACGAGCTGGTGAAGGGCGG
CGCCGAGGTGCTGGTGGCCGGCTGCACCGAGCTGCCCCTGGTGCTGGACCCGCAGGACGTGAAGGTCGAGCTGGTGGACC
CCGCCGACCTGCTCGCCCGCCGCTGCGTGGCGGTGTGCCTGGGCTACGAGGCCGTGCCGCAGGTGGGAGCTTAA

Upstream 100 bases:

>100_bases
CCCGCTCGGGCGCGTTCGACGGCGAGACGGTGGTGTTCCTGCACACCGGCGGCGCGCAGGGCCTGTTCGGCTACCAGTCC
GAACTGGAAGGCAAGCTCGG

Downstream 100 bases:

>100_bases
GGGGCGGCGTCCTTCGGCGGGCAAGAAGGGTCCACGAACCACACGAACCACACGAACGGGGGTCGCCCCCTTTCGTCATC
GCCCGGCTCGTCCGGGCGAC

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSEDDDGSLTLGVLGGMGPAATLDFLAKLQAYTPAKRDQDHIRVIADINPKAPDRNVPGSGAGNVLAEMAGALRGAGADV
LAMPCNTAHAHSDLIQRASGLPLIDMIDLAAEAAAESGAVRAGVLGTKGALKLYREYLAARGLGMVSLPPERQEAFMETL
YRIKGGDLSPEVSRQMKAFADELVKGGAEVLVAGCTELPLVLDPQDVKVELVDPADLLARRCVAVCLGYEAVPQVGA

Sequences:

>Translated_237_residues
MSEDDDGSLTLGVLGGMGPAATLDFLAKLQAYTPAKRDQDHIRVIADINPKAPDRNVPGSGAGNVLAEMAGALRGAGADV
LAMPCNTAHAHSDLIQRASGLPLIDMIDLAAEAAAESGAVRAGVLGTKGALKLYREYLAARGLGMVSLPPERQEAFMETL
YRIKGGDLSPEVSRQMKAFADELVKGGAEVLVAGCTELPLVLDPQDVKVELVDPADLLARRCVAVCLGYEAVPQVGA
>Mature_236_residues
SEDDDGSLTLGVLGGMGPAATLDFLAKLQAYTPAKRDQDHIRVIADINPKAPDRNVPGSGAGNVLAEMAGALRGAGADVL
AMPCNTAHAHSDLIQRASGLPLIDMIDLAAEAAAESGAVRAGVLGTKGALKLYREYLAARGLGMVSLPPERQEAFMETLY
RIKGGDLSPEVSRQMKAFADELVKGGAEVLVAGCTELPLVLDPQDVKVELVDPADLLARRCVAVCLGYEAVPQVGA

Specific function: Probable aspartate or glutamate racemase involved in peptidoglycan modification during cortex synthesis [H]

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 24643; Mature: 24511

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDDDGSLTLGVLGGMGPAATLDFLAKLQAYTPAKRDQDHIRVIADINPKAPDRNVPGS
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC
GAGNVLAEMAGALRGAGADVLAMPCNTAHAHSDLIQRASGLPLIDMIDLAAEAAAESGAV
CCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCE
RAGVLGTKGALKLYREYLAARGLGMVSLPPERQEAFMETLYRIKGGDLSPEVSRQMKAFA
EECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DELVKGGAEVLVAGCTELPLVLDPQDVKVELVDPADLLARRCVAVCLGYEAVPQVGA
HHHHHCCHHEEEECCCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHCHHHHCCCCC
>Mature Secondary Structure 
SEDDDGSLTLGVLGGMGPAATLDFLAKLQAYTPAKRDQDHIRVIADINPKAPDRNVPGS
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC
GAGNVLAEMAGALRGAGADVLAMPCNTAHAHSDLIQRASGLPLIDMIDLAAEAAAESGAV
CCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCE
RAGVLGTKGALKLYREYLAARGLGMVSLPPERQEAFMETLYRIKGGDLSPEVSRQMKAFA
EECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DELVKGGAEVLVAGCTELPLVLDPQDVKVELVDPADLLARRCVAVCLGYEAVPQVGA
HHHHHCCHHEEEECCCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491712; 9384377 [H]