Click here to switch to the map view.

The map label for this gene is 197106379

Identifier: 197106379

GI number: 197106379

Start: 3334035

End: 3336173

Strand: Direct

Name: 197106379

Synonym: PHZ_c2918

Alternate gene names: NA

Gene position: 3334035-3336173 (Clockwise)

Preceding gene: 197106378

Following gene: 197106380

Centisome position: 83.43

GC content: 70.97

Gene sequence:

>2139_bases
ATGCTGTTCAGGATCGATCGACTGCTGGCGGGCGCCGGATGCGCCCTCGCCGCCTTGGGCTCCGCAGGGCCGGCCCTGGC
CCAGGCCGGCCCGAGCGAGACCCGCATCCTCAGCTATCCCACCCCGGGCGTGGACCTGGGCGCCGGCTGGGACAGCCAGG
GCGTGCAGCCCAAGACCTCCAAGTGCGTGAGCTTCGTCGCCTCGCAGCAGCCCGGCTCGCCGCAGGACGTGCGCCATGAG
CGCACCCTGGTGTCCGACAAGTACGGCTATTCGAACGCCCTGAACGTCTCGGCGGACGTGCAGGTGAAGTCGATGACCGG
CGCGGCGGTCGACGTGAAGGCGACCTACGCCAACAAGAAGACCTTCAACTCCACCTATCTGAACGTCGTCGACCTGGTCT
ACGTCGACAACGGCTGGACCTACACCGATGCGCCGAAGCCCGGCGCCGCCCTGAACTCCCCCCTGGGCGCCCCCCTGGGC
GCCCCCTTGGGCGCGACCGCGCCGACGGCCCTGGGACGACCGCCGGTGGACGCCTCCGACGCGGTCTATTTCCAGGCCGC
CGTCACGGCCAAGTCCATGCGCCAGCGGGACGCCGCCATCGTGTCCGGCCTGGAGCGGATGATCGGCCAGGGGGCCGGCG
GGCCCGCCGCCGCCTCGCCCGCGGCGCTGATGCCGCTGCGCGGACCGGCCGCGCCGCCGCCGGGCGCCGTGCTGCGGGAC
GCCCCCTCGATCACCGCCAGCGTGCTGCTGACGCCCGAGGCGCTGAAGCTGGCCCAGACCAACCCGGACCAGTTCCGCGC
CCAGTGCGGCGACGGCTTCGTGGCGGCGATCAACTCCGGCGGCGAGATGGCCGTCACCTACACCTTCATGACCACCTCGC
AGGAGGAGCAGCAGCAGATCGGCGCCTCGCTGAACGTCAGCTACGGCACGCCGTTCACCAATGTGGCCGCCAGCGCCTCG
GTCGCCCAGGCGATCGGCTCGTGGGGCAAGACGATCAGCACCAGCATCGACTTCTACCGCAGCGGCGGCAGCGGCGAGGT
GATCCCGACGACGCTCGAGCAGATCGACGCGCAGGTGCAGAGCTTCGCCGCAGCCGTCCAGCGCGCGCCGCAGCCGTACA
AGATCATGGTCATGGACTACCGCCGGCTGGCCAACTACCCGCAGGGCGGCATCGGCATGCCTTCGCTCAGCCCGTTCGAG
AAGCTGGCGTGGGAGTACGGCAAAGCCAACACCCTCTACACGACGGTCAGCCAGATCATCAGCGACCTGGGCGACCCGCA
GGCCAAGGCCAGGTACCTGACGGCGCGGTGGGGTTCGCAGGCCGGGGCGCTCAACAACACCCAGCAGGCGGCCGGCCAGC
GGATGACGGCCCTGCAGAACGTGGCCAAGGCCTGCATGGCGGCCAGCCCCAGCCAGGCGGCAAGCGTCTGCCAGACCACC
CAGTTCGACGACCTGTCGCCGCGCACGGACTTCCCGCTGCCGATCGGGCCGGGCAACGTCAGCGACGTGGTCAACGGCCT
CTGGAGCGACGCCGACGCCTACCGCACGGTGGTCTTCAACCGCTGGATCAACCAGGTGAACCAGAACCGCTGCTGGTCGC
ACCCGGCCGACCCGACCTACTGCCGCTACAGCAGCGAGCTGGCGCCGCTCCGGCAGCGGATCAACGTCGCCGCGCCGGGC
TACGCCGCGCTGGAGCTGGTGGACCAGCCGGGCCGCTGCCTGAACGTGGGCACGATCACCAGCTACGTCTCGGCCCAGCC
GTGCCCGTCCAGGCCGACGGACGCCGGCTTCTTCGTGAAGTGGGACCCGGTCCAGCAGACGCTGGTCTCGGAGGAGCCGA
ACCGGTGCGTCTACGCCATGCGCACGGCGACCACGACGCCGGGCTTCGCGATCGTCGGCCTCGCCGTCTGCGGCGCGACC
AACAACCAGGAGGACATCAGCCGGACCTGGACGTTCCGCGACTCGACCGACGCGGGCGGCCGCTGGGACAACACCGGCGC
CTACCTCGTCGTCGCCGACCGCAGCACGCCCTCGCAGCTGAACTCGTGCCTGGACAGCTACAGCCCCACCAGCACGTGGG
TGGCGCCCTGCACCCAGCCCAAGCGGGTGCGGATCTGGATGGCCAAGCCGGGGACCTGA

Upstream 100 bases:

>100_bases
TGCGCGGCTGGCGCGAGCGGGACCGCGTCGAGCAGGCGCTGAACGACTTCACCCGGCTTCTCGCCTTCTGAGTCCGACCC
AACACCGAAAAGGGGACCTC

Downstream 100 bases:

>100_bases
GGGTCGCCCGAACGGCCGAAGGGGGATCGGGGGCCCGCGGGCCCCCGATCTTCTTGGGAGGGATCGCATGGAAGCCTTGA
TCCGATACGCGTTGTCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 712; Mature: 712

Protein sequence:

>712_residues
MLFRIDRLLAGAGCALAALGSAGPALAQAGPSETRILSYPTPGVDLGAGWDSQGVQPKTSKCVSFVASQQPGSPQDVRHE
RTLVSDKYGYSNALNVSADVQVKSMTGAAVDVKATYANKKTFNSTYLNVVDLVYVDNGWTYTDAPKPGAALNSPLGAPLG
APLGATAPTALGRPPVDASDAVYFQAAVTAKSMRQRDAAIVSGLERMIGQGAGGPAAASPAALMPLRGPAAPPPGAVLRD
APSITASVLLTPEALKLAQTNPDQFRAQCGDGFVAAINSGGEMAVTYTFMTTSQEEQQQIGASLNVSYGTPFTNVAASAS
VAQAIGSWGKTISTSIDFYRSGGSGEVIPTTLEQIDAQVQSFAAAVQRAPQPYKIMVMDYRRLANYPQGGIGMPSLSPFE
KLAWEYGKANTLYTTVSQIISDLGDPQAKARYLTARWGSQAGALNNTQQAAGQRMTALQNVAKACMAASPSQAASVCQTT
QFDDLSPRTDFPLPIGPGNVSDVVNGLWSDADAYRTVVFNRWINQVNQNRCWSHPADPTYCRYSSELAPLRQRINVAAPG
YAALELVDQPGRCLNVGTITSYVSAQPCPSRPTDAGFFVKWDPVQQTLVSEEPNRCVYAMRTATTTPGFAIVGLAVCGAT
NNQEDISRTWTFRDSTDAGGRWDNTGAYLVVADRSTPSQLNSCLDSYSPTSTWVAPCTQPKRVRIWMAKPGT

Sequences:

>Translated_712_residues
MLFRIDRLLAGAGCALAALGSAGPALAQAGPSETRILSYPTPGVDLGAGWDSQGVQPKTSKCVSFVASQQPGSPQDVRHE
RTLVSDKYGYSNALNVSADVQVKSMTGAAVDVKATYANKKTFNSTYLNVVDLVYVDNGWTYTDAPKPGAALNSPLGAPLG
APLGATAPTALGRPPVDASDAVYFQAAVTAKSMRQRDAAIVSGLERMIGQGAGGPAAASPAALMPLRGPAAPPPGAVLRD
APSITASVLLTPEALKLAQTNPDQFRAQCGDGFVAAINSGGEMAVTYTFMTTSQEEQQQIGASLNVSYGTPFTNVAASAS
VAQAIGSWGKTISTSIDFYRSGGSGEVIPTTLEQIDAQVQSFAAAVQRAPQPYKIMVMDYRRLANYPQGGIGMPSLSPFE
KLAWEYGKANTLYTTVSQIISDLGDPQAKARYLTARWGSQAGALNNTQQAAGQRMTALQNVAKACMAASPSQAASVCQTT
QFDDLSPRTDFPLPIGPGNVSDVVNGLWSDADAYRTVVFNRWINQVNQNRCWSHPADPTYCRYSSELAPLRQRINVAAPG
YAALELVDQPGRCLNVGTITSYVSAQPCPSRPTDAGFFVKWDPVQQTLVSEEPNRCVYAMRTATTTPGFAIVGLAVCGAT
NNQEDISRTWTFRDSTDAGGRWDNTGAYLVVADRSTPSQLNSCLDSYSPTSTWVAPCTQPKRVRIWMAKPGT
>Mature_712_residues
MLFRIDRLLAGAGCALAALGSAGPALAQAGPSETRILSYPTPGVDLGAGWDSQGVQPKTSKCVSFVASQQPGSPQDVRHE
RTLVSDKYGYSNALNVSADVQVKSMTGAAVDVKATYANKKTFNSTYLNVVDLVYVDNGWTYTDAPKPGAALNSPLGAPLG
APLGATAPTALGRPPVDASDAVYFQAAVTAKSMRQRDAAIVSGLERMIGQGAGGPAAASPAALMPLRGPAAPPPGAVLRD
APSITASVLLTPEALKLAQTNPDQFRAQCGDGFVAAINSGGEMAVTYTFMTTSQEEQQQIGASLNVSYGTPFTNVAASAS
VAQAIGSWGKTISTSIDFYRSGGSGEVIPTTLEQIDAQVQSFAAAVQRAPQPYKIMVMDYRRLANYPQGGIGMPSLSPFE
KLAWEYGKANTLYTTVSQIISDLGDPQAKARYLTARWGSQAGALNNTQQAAGQRMTALQNVAKACMAASPSQAASVCQTT
QFDDLSPRTDFPLPIGPGNVSDVVNGLWSDADAYRTVVFNRWINQVNQNRCWSHPADPTYCRYSSELAPLRQRINVAAPG
YAALELVDQPGRCLNVGTITSYVSAQPCPSRPTDAGFFVKWDPVQQTLVSEEPNRCVYAMRTATTTPGFAIVGLAVCGAT
NNQEDISRTWTFRDSTDAGGRWDNTGAYLVVADRSTPSQLNSCLDSYSPTSTWVAPCTQPKRVRIWMAKPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75296; Mature: 75296

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFRIDRLLAGAGCALAALGSAGPALAQAGPSETRILSYPTPGVDLGAGWDSQGVQPKTS
CEEEHHHHHHCCCHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHH
KCVSFVASQQPGSPQDVRHERTLVSDKYGYSNALNVSADVQVKSMTGAAVDVKATYANKK
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEECCEECEEEEECCCCEEEEEEEECCCC
TFNSTYLNVVDLVYVDNGWTYTDAPKPGAALNSPLGAPLGAPLGATAPTALGRPPVDASD
CCCCHHEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVYFQAAVTAKSMRQRDAAIVSGLERMIGQGAGGPAAASPAALMPLRGPAAPPPGAVLRD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCC
APSITASVLLTPEALKLAQTNPDQFRAQCGDGFVAAINSGGEMAVTYTFMTTSQEEQQQI
CCCCEEEEEECHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCHHHHHHC
GASLNVSYGTPFTNVAASASVAQAIGSWGKTISTSIDFYRSGGSGEVIPTTLEQIDAQVQ
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHH
SFAAAVQRAPQPYKIMVMDYRRLANYPQGGIGMPSLSPFEKLAWEYGKANTLYTTVSQII
HHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
SDLGDPQAKARYLTARWGSQAGALNNTQQAAGQRMTALQNVAKACMAASPSQAASVCQTT
HHCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
QFDDLSPRTDFPLPIGPGNVSDVVNGLWSDADAYRTVVFNRWINQVNQNRCWSHPADPTY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
CRYSSELAPLRQRINVAAPGYAALELVDQPGRCLNVGTITSYVSAQPCPSRPTDAGFFVK
CCCCHHHHHHHHHCCCCCCCHHEEHEECCCCCEEECHHHHHHHCCCCCCCCCCCCCEEEE
WDPVQQTLVSEEPNRCVYAMRTATTTPGFAIVGLAVCGATNNQEDISRTWTFRDSTDAGG
ECHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCC
RWDNTGAYLVVADRSTPSQLNSCLDSYSPTSTWVAPCTQPKRVRIWMAKPGT
CCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure
MLFRIDRLLAGAGCALAALGSAGPALAQAGPSETRILSYPTPGVDLGAGWDSQGVQPKTS
CEEEHHHHHHCCCHHHHHHCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHH
KCVSFVASQQPGSPQDVRHERTLVSDKYGYSNALNVSADVQVKSMTGAAVDVKATYANKK
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEECCEECEEEEECCCCEEEEEEEECCCC
TFNSTYLNVVDLVYVDNGWTYTDAPKPGAALNSPLGAPLGAPLGATAPTALGRPPVDASD
CCCCHHEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVYFQAAVTAKSMRQRDAAIVSGLERMIGQGAGGPAAASPAALMPLRGPAAPPPGAVLRD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCC
APSITASVLLTPEALKLAQTNPDQFRAQCGDGFVAAINSGGEMAVTYTFMTTSQEEQQQI
CCCCEEEEEECHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCHHHHHHC
GASLNVSYGTPFTNVAASASVAQAIGSWGKTISTSIDFYRSGGSGEVIPTTLEQIDAQVQ
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHH
SFAAAVQRAPQPYKIMVMDYRRLANYPQGGIGMPSLSPFEKLAWEYGKANTLYTTVSQII
HHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
SDLGDPQAKARYLTARWGSQAGALNNTQQAAGQRMTALQNVAKACMAASPSQAASVCQTT
HHCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
QFDDLSPRTDFPLPIGPGNVSDVVNGLWSDADAYRTVVFNRWINQVNQNRCWSHPADPTY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
CRYSSELAPLRQRINVAAPGYAALELVDQPGRCLNVGTITSYVSAQPCPSRPTDAGFFVK
CCCCHHHHHHHHHCCCCCCCHHEEHEECCCCCEEECHHHHHHHCCCCCCCCCCCCCEEEE
WDPVQQTLVSEEPNRCVYAMRTATTTPGFAIVGLAVCGATNNQEDISRTWTFRDSTDAGG
ECHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCC
RWDNTGAYLVVADRSTPSQLNSCLDSYSPTSTWVAPCTQPKRVRIWMAKPGT
CCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA