| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is yfhA [C]
Identifier: 197106266
GI number: 197106266
Start: 3217314
End: 3217766
Strand: Direct
Name: yfhA [C]
Synonym: PHZ_c2805
Alternate gene names: 197106266
Gene position: 3217314-3217766 (Clockwise)
Preceding gene: 197106265
Following gene: 197106277
Centisome position: 80.51
GC content: 73.07
Gene sequence:
>453_bases TTGAGTTGCGTCAAAGCAGCCTTGCGCGGCGCCGGGCATTCTGCCTGCATGCCGCCGAGCCGCCCACCCCTGCCCCCGCT CATCGTCATCGTCGACGACGACCCTGGCCTGGCCGGAGGGTTGAAGTTCTCCCTCGAGGCCGAGGGCTATCGCGTGGAAA CGCTGGAGACCGGCGAGGCGCTGCTGCTGCGCGACCTGCCCGAGGCCGACTGCTGCCTGGTGGTGGACGAGCGCCTGCCC GGGATCAGCGGCCTGAACGCGCTGGCCCAACTCCGCCGGCGGGGCGTGGACCTGCCGGCGCTGCTGATCACCAGCAATCC CAGCCCGGTGCTGCGGGACGCGGCCGCCGCGGCCGGGACGCCGATCATCGAAAAGCCCCTGCTGGGCGATGCGCTGCTGC AGCCCATCGCCGACGCCCTGGCCCGGGGGCGCGAAGGCGGCCGGGGGCGTTAG
Upstream 100 bases:
>100_bases GTCTACCGGGCCAACGTGATGACCAAGACGGGGGCGTCCAGCCTCTCCGAACTGGTCCGGATGGCGCTGCTCGCGGGGTT CTAGCGGCGCCCGCCCGCCG
Downstream 100 bases:
>100_bases CCGTCAGTCCTTCGGCGAGCCGCGCAGCCAGACGAAGGCCAGCGGCAGCATGAACACCGCATAGCCGGCGATCACGAGCA TCAGATAAGGCGTCAGCATG
Product: response regulator
Products: NA
Alternate protein names: Response Regulator Receiver; Response Regulator Receiver Domain Protein; Response Regulator
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEALLLRDLPEADCCLVVDERLP GISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGTPIIEKPLLGDALLQPIADALARGREGGRGR
Sequences:
>Translated_150_residues MSCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEALLLRDLPEADCCLVVDERLP GISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGTPIIEKPLLGDALLQPIADALARGREGGRGR >Mature_149_residues SCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEALLLRDLPEADCCLVVDERLPG ISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGTPIIEKPLLGDALLQPIADALARGREGGRGR
Specific function: Probable Member Of A Two-Component Regulatory System Yfha/Yfhk. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15572; Mature: 15441
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEA CHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCE LLLRDLPEADCCLVVDERLPGISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGT EEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC PIIEKPLLGDALLQPIADALARGREGGRGR CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEA HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCE LLLRDLPEADCCLVVDERLPGISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGT EEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC PIIEKPLLGDALLQPIADALARGREGGRGR CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA