Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197106077

Identifier: 197106077

GI number: 197106077

Start: 3004992

End: 3006071

Strand: Reverse

Name: 197106077

Synonym: PHZ_c2616

Alternate gene names: NA

Gene position: 3006071-3004992 (Counterclockwise)

Preceding gene: 197106080

Following gene: 197106075

Centisome position: 75.22

GC content: 73.24

Gene sequence:

>1080_bases
GTGGCGACAATTGTCGGGGGGCGTCCTGTCGCCCTCGCGGTCAGGGAACCGAGTATCTTGAAATTTGGAACGCAGGCACG
CGCCGACTGGCGCATGCTGATGAGCGCCGCTTTGATTGGTTCAGGCGTTGGCCTGAGCCTGGGCGCTGCATACCTGGCGG
GGGGCATGGCCCAGCACGCCGCCGACCACAGCCGCGTGGAGCGCATCGCCCAGGCGACGGCCGGCGGCTATTCGAACGCC
CTTCTGCAGGACGAAGGCGTGCTGCGCCTGACGCAGGCCGACGCCGCCGCGGCGCAGGCCCGCCAACTCGCCGCGCTCAC
CGAGCGGCTGGAGCGCAGCACCGCCCGCGAGGAGTCCAACGCACAACGCGAGCTCGAGTGCCTCACCCAGGCGGTCTATT
ACGAGGCCCGCGGCGAAAGCCCGCGCGGACAGCTCGCGGTCGCCCAGGTGGTGATGAACCGTGTGAAGCACCCGGCCTTC
CCGAAGACCGTGTGCGGGGTGGTGTTCCAGGGCTCGGCCCGCCGGACCGGCTGCCAGTTCAGCTTCACCTGCGACGGCTC
CATGCGCCGCGGCCAGGAGACCAGCGCCTGGAAGCGCGCCCGCAAGGTCGCGGCCCGCGTCCTGGCCGGCGCCGCCGTCG
CCGAGGTCGGCTCGGCCACGCACTTCCACACGACCGCGGTCTCGCCGGCCTGGGGCCCGCAGATGCGGCGCGTGGCCCAG
GTGGGCATGCACGTCTTCTACAAGTTCAACCCGCGCGGGATGATGCAGGCGGCCGCGCCGGCGGCGGTGCAGCCTGCGGT
GCTGACCTCGGCCGTCGCCGAGCCGATGGAGCTGCGGCTGACCAACGCCGTCATGGAGGCCCCTGCGGAGGCTGCGGCCG
GCGAGGCCAAGGACGCCGTGGCGGCCAATCCGGCCGCGGCTGCGGACAAGCCGGTCCAAGGCGCCAAGTCCGCCGCGGCC
CAGGGTCAGGCTTCGGCCCAGCCCAAGCCGGCCGCGACCAAGCCGGCGCCCGCCGCGCTCAAGCCGGCCGAAGCGGCGGC
GCTGAAGGCCCCGCAGGCCTCGGACGCCGCGATCTCCTGA

Upstream 100 bases:

>100_bases
GTTCATTCATATCTCCTTCACCATTTGCCGTCGCCTGCCCCATTAACGGATCCGGGGCCAGGCCTGCCGGCGGGCGCTTC
CAGCACGAGCAGGGGCGACC

Downstream 100 bases:

>100_bases
CGCGATCCCTGCTCCGCAGCCGGGTCTGTGGAGGCGGGCTCAAGCCCGCGCCGCCCGCCGCAGCGCCTGCGGCGGCTGGC
CGAAGGCGCGCAGGAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Hydrolase; Cell Wall Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MATIVGGRPVALAVREPSILKFGTQARADWRMLMSAALIGSGVGLSLGAAYLAGGMAQHAADHSRVERIAQATAGGYSNA
LLQDEGVLRLTQADAAAAQARQLAALTERLERSTAREESNAQRELECLTQAVYYEARGESPRGQLAVAQVVMNRVKHPAF
PKTVCGVVFQGSARRTGCQFSFTCDGSMRRGQETSAWKRARKVAARVLAGAAVAEVGSATHFHTTAVSPAWGPQMRRVAQ
VGMHVFYKFNPRGMMQAAAPAAVQPAVLTSAVAEPMELRLTNAVMEAPAEAAAGEAKDAVAANPAAAADKPVQGAKSAAA
QGQASAQPKPAATKPAPAALKPAEAAALKAPQASDAAIS

Sequences:

>Translated_359_residues
MATIVGGRPVALAVREPSILKFGTQARADWRMLMSAALIGSGVGLSLGAAYLAGGMAQHAADHSRVERIAQATAGGYSNA
LLQDEGVLRLTQADAAAAQARQLAALTERLERSTAREESNAQRELECLTQAVYYEARGESPRGQLAVAQVVMNRVKHPAF
PKTVCGVVFQGSARRTGCQFSFTCDGSMRRGQETSAWKRARKVAARVLAGAAVAEVGSATHFHTTAVSPAWGPQMRRVAQ
VGMHVFYKFNPRGMMQAAAPAAVQPAVLTSAVAEPMELRLTNAVMEAPAEAAAGEAKDAVAANPAAAADKPVQGAKSAAA
QGQASAQPKPAATKPAPAALKPAEAAALKAPQASDAAIS
>Mature_358_residues
ATIVGGRPVALAVREPSILKFGTQARADWRMLMSAALIGSGVGLSLGAAYLAGGMAQHAADHSRVERIAQATAGGYSNAL
LQDEGVLRLTQADAAAAQARQLAALTERLERSTAREESNAQRELECLTQAVYYEARGESPRGQLAVAQVVMNRVKHPAFP
KTVCGVVFQGSARRTGCQFSFTCDGSMRRGQETSAWKRARKVAARVLAGAAVAEVGSATHFHTTAVSPAWGPQMRRVAQV
GMHVFYKFNPRGMMQAAAPAAVQPAVLTSAVAEPMELRLTNAVMEAPAEAAAGEAKDAVAANPAAAADKPVQGAKSAAAQ
GQASAQPKPAATKPAPAALKPAEAAALKAPQASDAAIS

Specific function: Unknown

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37113; Mature: 36981

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIVGGRPVALAVREPSILKFGTQARADWRMLMSAALIGSGVGLSLGAAYLAGGMAQHA
CCEEECCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ADHSRVERIAQATAGGYSNALLQDEGVLRLTQADAAAAQARQLAALTERLERSTAREESN
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRELECLTQAVYYEARGESPRGQLAVAQVVMNRVKHPAFPKTVCGVVFQGSARRTGCQF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEE
SFTCDGSMRRGQETSAWKRARKVAARVLAGAAVAEVGSATHFHTTAVSPAWGPQMRRVAQ
EEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
VGMHVFYKFNPRGMMQAAAPAAVQPAVLTSAVAEPMELRLTNAVMEAPAEAAAGEAKDAV
HHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHCCCCHHHH
AANPAAAADKPVQGAKSAAAQGQASAQPKPAATKPAPAALKPAEAAALKAPQASDAAIS
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATIVGGRPVALAVREPSILKFGTQARADWRMLMSAALIGSGVGLSLGAAYLAGGMAQHA
CEEECCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ADHSRVERIAQATAGGYSNALLQDEGVLRLTQADAAAAQARQLAALTERLERSTAREESN
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRELECLTQAVYYEARGESPRGQLAVAQVVMNRVKHPAFPKTVCGVVFQGSARRTGCQF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEE
SFTCDGSMRRGQETSAWKRARKVAARVLAGAAVAEVGSATHFHTTAVSPAWGPQMRRVAQ
EEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
VGMHVFYKFNPRGMMQAAAPAAVQPAVLTSAVAEPMELRLTNAVMEAPAEAAAGEAKDAV
HHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHCCCCHHHH
AANPAAAADKPVQGAKSAAAQGQASAQPKPAATKPAPAALKPAEAAALKAPQASDAAIS
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA