| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106080
Identifier: 197106080
GI number: 197106080
Start: 3008254
End: 3008889
Strand: Reverse
Name: 197106080
Synonym: PHZ_c2619
Alternate gene names: NA
Gene position: 3008889-3008254 (Counterclockwise)
Preceding gene: 197106082
Following gene: 197106077
Centisome position: 75.29
GC content: 74.53
Gene sequence:
>636_bases ATGACGAGGACGATGTGGCTCGCCGCGGGAGTGGCCGCGGCTCTGGCGTGTGCGGGAGCGGCGCAGGCCCAGCCTGGCCC GATGCCGTCGGTCCGGGGCGGCTCGGCCACCCTCTACGAACTGCCGAACTACCAGGGCCGGTCGGTGACCATCACCAACT CGGTCTCCGACCTGGGAGACTGGCGCTTCAACGACCGGGCCCGGAGCGCGCGCTTCCAGGGGACCTGGCGCGTCTGCGAG CACGACGATTTCGAAGGGCGCTGCCAGGACATCCGGGGGGACGTCCCCGACCTGACCCAGTACGGCCTCTCGGGCCAGGT CTCGTCGCTGGAGCCCGCCGGCTTCGGCCGCCCGCGTCCCGGGCCCGAGGACGGCTGGGGCCCGCGTCCGCCGGGCGGCG GGCGCGACGCGCGCGGCTACGACGGCGAGCGGACGGTCTTCTTCCCGCGCCCCACCGTCCGCGGCGTGGATGTCGCCGCC GGCCGGCACGGAGCGAACGTCTTCTGCCGCCGGCAGGGGCTGGGCGATGCGGTCTGGTTCGACGACAGCCAGCGGGCGTC CCGCGCGATCGGACCCGAGGGCCAGATCACCGGGCGTTCGCCGGTGCTCCGCGACCTGCTCTGCCGCAAGTACTGA
Upstream 100 bases:
>100_bases CAGTCCGGAGATGATCTGTCCTGACGGCCGGCTGAGCCGAGCCTTCAGCGGCGGTTCATCACGGCGAAGCTTGATTGGAC GCCTGGCTAAGGAGGCTGAG
Downstream 100 bases:
>100_bases GGGTCGGAAGTCCCAGGGCGGGGCGCGGGGTCAGGCCCCGCGCGCCGACCACAGCATCCGCCGCAGCGTGCCGTCGCGGT CGATGAGGGTGTGCTTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTRTMWLAAGVAAALACAGAAQAQPGPMPSVRGGSATLYELPNYQGRSVTITNSVSDLGDWRFNDRARSARFQGTWRVCE HDDFEGRCQDIRGDVPDLTQYGLSGQVSSLEPAGFGRPRPGPEDGWGPRPPGGGRDARGYDGERTVFFPRPTVRGVDVAA GRHGANVFCRRQGLGDAVWFDDSQRASRAIGPEGQITGRSPVLRDLLCRKY
Sequences:
>Translated_211_residues MTRTMWLAAGVAAALACAGAAQAQPGPMPSVRGGSATLYELPNYQGRSVTITNSVSDLGDWRFNDRARSARFQGTWRVCE HDDFEGRCQDIRGDVPDLTQYGLSGQVSSLEPAGFGRPRPGPEDGWGPRPPGGGRDARGYDGERTVFFPRPTVRGVDVAA GRHGANVFCRRQGLGDAVWFDDSQRASRAIGPEGQITGRSPVLRDLLCRKY >Mature_210_residues TRTMWLAAGVAAALACAGAAQAQPGPMPSVRGGSATLYELPNYQGRSVTITNSVSDLGDWRFNDRARSARFQGTWRVCEH DDFEGRCQDIRGDVPDLTQYGLSGQVSSLEPAGFGRPRPGPEDGWGPRPPGGGRDARGYDGERTVFFPRPTVRGVDVAAG RHGANVFCRRQGLGDAVWFDDSQRASRAIGPEGQITGRSPVLRDLLCRKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22811; Mature: 22679
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50915 CRYSTALLIN_BETA_GAMMA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTMWLAAGVAAALACAGAAQAQPGPMPSVRGGSATLYELPNYQGRSVTITNSVSDLGD CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCHHHHHC WRFNDRARSARFQGTWRVCEHDDFEGRCQDIRGDVPDLTQYGLSGQVSSLEPAGFGRPRP CCCCCHHHCCCCCCEEEECCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCC GPEDGWGPRPPGGGRDARGYDGERTVFFPRPTVRGVDVAAGRHGANVFCRRQGLGDAVWF CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEEEE DDSQRASRAIGPEGQITGRSPVLRDLLCRKY CCCHHHHHCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TRTMWLAAGVAAALACAGAAQAQPGPMPSVRGGSATLYELPNYQGRSVTITNSVSDLGD CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCHHHHHC WRFNDRARSARFQGTWRVCEHDDFEGRCQDIRGDVPDLTQYGLSGQVSSLEPAGFGRPRP CCCCCHHHCCCCCCEEEECCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCC GPEDGWGPRPPGGGRDARGYDGERTVFFPRPTVRGVDVAAGRHGANVFCRRQGLGDAVWF CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCEEEE DDSQRASRAIGPEGQITGRSPVLRDLLCRKY CCCHHHHHCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA