| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197106033
Identifier: 197106033
GI number: 197106033
Start: 2956692
End: 2957564
Strand: Reverse
Name: 197106033
Synonym: PHZ_c2572
Alternate gene names: NA
Gene position: 2957564-2956692 (Counterclockwise)
Preceding gene: 197106035
Following gene: 197106030
Centisome position: 74.01
GC content: 69.19
Gene sequence:
>873_bases ATGATCAGGATTGTGGCGGCGCTGGCTGTGGCTGGCCTCATGGTGGGCGGCGGCCCGGCTCTCGCGCAGGGCAAGGGCAA GGCCAAGGCCTCCGCGACGGCCGCCTACAAGGCCCCCCGCCTCGCCGGGACCAAGCAACCCGACCTGAACGGCGTGTGGC AGGTGATGAACACCGCCGGCTGGGACGTCGAGCCCCACGCCGCGCGCGCGGCGCTGCAGCTGCGGCCCGGCCCCTACTGG CCGCTGCCGGCCAAGGAAGTCCTGGCCCTGGGCGCCGTGGGCGCGGTGCCGGGCGGCGCGGGCGTCGTGGAAGGCGGCGA GATCCCCTACACGGCCGAGGCCAAGCAGGTCCGCGACGAGAACCGCGCCAACTACCTGGACCGCGATCCCGAGGTGAAGT GCTACCTTCCGGGCGTGCCGCGGGCCAACTACATGCACCTGCCGTTCCAGATCTTCCAGTCCGACAAGTCGATGATGATC GCCTACGAGTACGCGGGCGCGGTGCGGAACCTGCTGTTCGACGATCCGGGCCCGCCGCCGGTGGACTCCTGGATGGGCCA GTCGGTGGCCAAGTGGGATGGCGACACCCTGGTGGTCACCGTGACCGGCCAGAACGACCGCACCTGGTTCGATCGCGCCG GCAACCACCACTCGGCCGACATGGTGGTCGAGGAGCGCTGGACGCCCACCGGTCCGATGACCATGCGCTACGAGGCGACG ATCACCGATCCGAACACCTTCACCCGCCCGTGGAAGATGAGCATGAACCTCTACAAGCGGGTCGGCGAGGATGCGCAGCT GCAGCAGTTCAAGTGCGTCGAGTTCGTCGAGGAGCTGATGTACGGCCACCTGCGCAAGGAGCCGCTGAAGTAG
Upstream 100 bases:
>100_bases AGCGGGCCGTGCGCTGGCGCTTTGGGTGAACGTTGATTAGGCTGTGCTGCAAAGAAAGTTCCGCCGCCTGGACGGACGGA ACGTTGGGGGAAACGAGAGC
Downstream 100 bases:
>100_bases CGGCGCCGGCCCACGGGAAGAGCAGAACAGACAAGAACATCCGGCGTTGGAGGCGCATGATGAATAGGAAGCACTGGATC ATTGGCGCAGCGGCGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIRIVAALAVAGLMVGGGPALAQGKGKAKASATAAYKAPRLAGTKQPDLNGVWQVMNTAGWDVEPHAARAALQLRPGPYW PLPAKEVLALGAVGAVPGGAGVVEGGEIPYTAEAKQVRDENRANYLDRDPEVKCYLPGVPRANYMHLPFQIFQSDKSMMI AYEYAGAVRNLLFDDPGPPPVDSWMGQSVAKWDGDTLVVTVTGQNDRTWFDRAGNHHSADMVVEERWTPTGPMTMRYEAT ITDPNTFTRPWKMSMNLYKRVGEDAQLQQFKCVEFVEELMYGHLRKEPLK
Sequences:
>Translated_290_residues MIRIVAALAVAGLMVGGGPALAQGKGKAKASATAAYKAPRLAGTKQPDLNGVWQVMNTAGWDVEPHAARAALQLRPGPYW PLPAKEVLALGAVGAVPGGAGVVEGGEIPYTAEAKQVRDENRANYLDRDPEVKCYLPGVPRANYMHLPFQIFQSDKSMMI AYEYAGAVRNLLFDDPGPPPVDSWMGQSVAKWDGDTLVVTVTGQNDRTWFDRAGNHHSADMVVEERWTPTGPMTMRYEAT ITDPNTFTRPWKMSMNLYKRVGEDAQLQQFKCVEFVEELMYGHLRKEPLK >Mature_290_residues MIRIVAALAVAGLMVGGGPALAQGKGKAKASATAAYKAPRLAGTKQPDLNGVWQVMNTAGWDVEPHAARAALQLRPGPYW PLPAKEVLALGAVGAVPGGAGVVEGGEIPYTAEAKQVRDENRANYLDRDPEVKCYLPGVPRANYMHLPFQIFQSDKSMMI AYEYAGAVRNLLFDDPGPPPVDSWMGQSVAKWDGDTLVVTVTGQNDRTWFDRAGNHHSADMVVEERWTPTGPMTMRYEAT ITDPNTFTRPWKMSMNLYKRVGEDAQLQQFKCVEFVEELMYGHLRKEPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31860; Mature: 31860
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIVAALAVAGLMVGGGPALAQGKGKAKASATAAYKAPRLAGTKQPDLNGVWQVMNTAG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC WDVEPHAARAALQLRPGPYWPLPAKEVLALGAVGAVPGGAGVVEGGEIPYTAEAKQVRDE CCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH NRANYLDRDPEVKCYLPGVPRANYMHLPFQIFQSDKSMMIAYEYAGAVRNLLFDDPGPPP HHCCCCCCCCCEEEEECCCCCCCEEECCHHEEECCCCEEEEEHHHHHHHHHHCCCCCCCC VDSWMGQSVAKWDGDTLVVTVTGQNDRTWFDRAGNHHSADMVVEERWTPTGPMTMRYEAT HHHHHCCHHHCCCCCEEEEEEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEE ITDPNTFTRPWKMSMNLYKRVGEDAQLQQFKCVEFVEELMYGHLRKEPLK ECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIRIVAALAVAGLMVGGGPALAQGKGKAKASATAAYKAPRLAGTKQPDLNGVWQVMNTAG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC WDVEPHAARAALQLRPGPYWPLPAKEVLALGAVGAVPGGAGVVEGGEIPYTAEAKQVRDE CCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH NRANYLDRDPEVKCYLPGVPRANYMHLPFQIFQSDKSMMIAYEYAGAVRNLLFDDPGPPP HHCCCCCCCCCEEEEECCCCCCCEEECCHHEEECCCCEEEEEHHHHHHHHHHCCCCCCCC VDSWMGQSVAKWDGDTLVVTVTGQNDRTWFDRAGNHHSADMVVEERWTPTGPMTMRYEAT HHHHHCCHHHCCCCCEEEEEEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCEEEEEEEE ITDPNTFTRPWKMSMNLYKRVGEDAQLQQFKCVEFVEELMYGHLRKEPLK ECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA