| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106035
Identifier: 197106035
GI number: 197106035
Start: 2958316
End: 2959968
Strand: Reverse
Name: 197106035
Synonym: PHZ_c2574
Alternate gene names: NA
Gene position: 2959968-2958316 (Counterclockwise)
Preceding gene: 197106036
Following gene: 197106033
Centisome position: 74.07
GC content: 72.29
Gene sequence:
>1653_bases ATGAAGCCGCTCAAGATGTTGGCCGTCCCGGCCGTGGCCGTCGCGCTGGCCTCTGCGCTGGCCTCTGGCGTGAGCGCCCA GCCGGTCTCCGGCGCGGCTTCGGCCGAGCGCATCCGGGCGCACATGGGCTTCCTGGCCAGCGATCTCCTGGAGGGGCGCG AGGCGGGGACCCGCGGCTACGACATCGCCGCCGAGTACGCCGCCGCCCAGTTCGCGCTGCTGGGCCTGAAGCCGGCCGGC GACGCCGGCTCGTACTTCCAGACGGTGCCGATGGTCTCGGCCCGCGCGGTGGACGAGGGCCGGCTGGTCGTGAAGGGGCC CACGGGGACGACGGCCCTGGTCCACGGCGAGGACTACCTCGTCGCCCGCAACCCCGCCGCCGCCGAGACGAAGGTCGCCG CGCCCCTGGTGTTCGTCGGCTACGGCGTCGTGGCCCCCGAGAAGGGCCGCGACGACTACAAGGGCCTGGACGTGAAGGGG AAGATCGTCGTCGCTCTCGACGGCGCGCCCAAGGCGTTCCAGTCGGAGGAGCGCGCCTACTACCGCAGCGGCCGCACCAA GCGCCTCGAGGCGGCCAAGCGGGGCGCGGTGGGCTTCATCGAGGTCAACACGCCCACCAGCGAGAAGATGCGGCCGTTCG ACCAGTCGGCGCGCAACTGGAAGACCTGGGCCATGACCTGGCGTGCGCCCGGCGGCGGCCCGTTCGTGGTCGCACCCGAG ACGCCGCTGCTGGCGAGCGTGAGCGTGAAGGGCGCGGCCAAGCTGTTCGCCGGCGCCAAGGTCCCGCTGGAGACGATCTA CGCCGCCGCCGATGCGCCCAAGGGCGTGACGCCCCGCTTCGCCCTGCCGGCCTCGGCCGAGGCGGCGTTCCGCACCGAGC TGAAGGAGACCCAGAGCCGCAACGTGGCGGCCCTGCTGGAGGGTTCGGACACCGCCCTGAAGGCCGAGACGGTGGTGCTG TCCGCCCACCTCGACCACGTCGGCGTGCGCGAGACGAAGGACGGCGAGGACGGACTGCACAACGGCGCGCTCGACAACGC CGGCGGCGTCGCCACGACCTTCGAGGTCGCCCGGGCCTTCGTCGAGAGCGGCGAGAAGCCGAAACGTTCGGTCCTGTTCC TGCTGGTGACCGCCGAGGAGAAGGGGCTAGTCGGCGCCGAGTACTTCGCCCGCAATCCGACTCCCGGGGTCGGGACGATG GTGGCCAACGTCAACCTCGACATGCCCATCCTGACCTACGACTTCAGCGACCTGGTGGCGTTCGGCGCCGAGCGCTCGGC GATCGGACCGGCGGTCCAGCGGGCGGCCGCCCGCGTGGGCGTGGCCCTGTCGCCGGACCCGCTCCCGGACGAGGGCCTGT TCACCCGTTCGGACCACTACCGCTTCGTCGAGGCGGGGGTGCCCTCGGTGTTCCTGATGACCGGCTTCGCCGAGGGCGGC GAGGAGAAGTTCCGCGGCTTCCTGGCCGGCTGCTACCACAAGCCCTGCGATGACCTCTCGCAGCCGATCGACTACGCCGC GGGCGCCAAGTTCGCGAAGATCAACTACGAGATCGCCCGCGAGCTGGCAGACGCCGACCGGCGCCCGGCCTGGAACCGGG GCGACTTCTTCGCCGGCCGCTTCGCCACGGACCGGACGGTCGCCGACCGCTAG
Upstream 100 bases:
>100_bases GCCGCTCGCGGAAGCTGCGCAGCTTCCTCGACAGCTAGGACTGGCGCGCACGCCGCGATCCATTAGAACTCCCCGGGACA GGCGTTCCGGGGAGTTTTTC
Downstream 100 bases:
>100_bases CGCCAGCCGTAGTTGAAGCTGACCGAGACGCGCGGGGTCCTGGCCCGGTTCGCCGGGACCTCGTGCCGAAGCCAGCTTTC CCACATGTAGACCGTGCCGG
Product: aminopeptidase
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; M20/M25/M40 Family Peptidase; LB Protein; Aminopeptidase Y; Protein Containing Aminopeptidase Domain; WD40-Like Beta Propeller
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGYDIAAEYAAAQFALLGLKPAG DAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYLVARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKG KIVVALDGAPKAFQSEERAYYRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSRNVAALLEGSDTALKAETVVL SAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAFVESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTM VANVNLDMPILTYDFSDLVAFGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGRFATDRTVADR
Sequences:
>Translated_550_residues MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGYDIAAEYAAAQFALLGLKPAG DAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYLVARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKG KIVVALDGAPKAFQSEERAYYRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSRNVAALLEGSDTALKAETVVL SAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAFVESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTM VANVNLDMPILTYDFSDLVAFGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGRFATDRTVADR >Mature_550_residues MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGYDIAAEYAAAQFALLGLKPAG DAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYLVARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKG KIVVALDGAPKAFQSEERAYYRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSRNVAALLEGSDTALKAETVVL SAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAFVESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTM VANVNLDMPILTYDFSDLVAFGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGRFATDRTVADR
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58129; Mature: 58129
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DIAAEYAAAQFALLGLKPAGDAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYL HHHHHHHHHEEEEEECCCCCCCCCHHHHCCCHHEEECCCCEEEEECCCCCEEEEECCEEE VARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKGKIVVALDGAPKAFQSEERAY EECCCCCCCHHHHCCEEEEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH YRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE HHCCCCHHHHHHHCCCEEEEEECCCCHHHCCCCHHHCCCCEEEEEEEECCCCCCEEECCC TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSR CCCEEEEECCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCC NVAALLEGSDTALKAETVVLSAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAF CEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTMVANVNLDMPILTYDFSDLVA HHCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEECHHHHHH FGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG HCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCEECCCCCEEEECCCCEEEEEECCCCCC EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGR HHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEECC FATDRTVADR CCCCCCCCCC >Mature Secondary Structure MKPLKMLAVPAVAVALASALASGVSAQPVSGAASAERIRAHMGFLASDLLEGREAGTRGY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DIAAEYAAAQFALLGLKPAGDAGSYFQTVPMVSARAVDEGRLVVKGPTGTTALVHGEDYL HHHHHHHHHEEEEEECCCCCCCCCHHHHCCCHHEEECCCCEEEEECCCCCEEEEECCEEE VARNPAAAETKVAAPLVFVGYGVVAPEKGRDDYKGLDVKGKIVVALDGAPKAFQSEERAY EECCCCCCCHHHHCCEEEEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH YRSGRTKRLEAAKRGAVGFIEVNTPTSEKMRPFDQSARNWKTWAMTWRAPGGGPFVVAPE HHCCCCHHHHHHHCCCEEEEEECCCCHHHCCCCHHHCCCCEEEEEEEECCCCCCEEECCC TPLLASVSVKGAAKLFAGAKVPLETIYAAADAPKGVTPRFALPASAEAAFRTELKETQSR CCCEEEEECCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCC NVAALLEGSDTALKAETVVLSAHLDHVGVRETKDGEDGLHNGALDNAGGVATTFEVARAF CEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VESGEKPKRSVLFLLVTAEEKGLVGAEYFARNPTPGVGTMVANVNLDMPILTYDFSDLVA HHCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCEEEECHHHHHH FGAERSAIGPAVQRAAARVGVALSPDPLPDEGLFTRSDHYRFVEAGVPSVFLMTGFAEGG HCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCEECCCCCEEEECCCCEEEEEECCCCCC EEKFRGFLAGCYHKPCDDLSQPIDYAAGAKFAKINYEIARELADADRRPAWNRGDFFAGR HHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEECC FATDRTVADR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA