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The map label for this gene is panD

Identifier: 197106030

GI number: 197106030

Start: 2952317

End: 2952673

Strand: Reverse

Name: panD

Synonym: PHZ_c2569

Alternate gene names: 197106030

Gene position: 2952673-2952317 (Counterclockwise)

Preceding gene: 197106033

Following gene: 197106028

Centisome position: 73.89

GC content: 66.39

Gene sequence:

>357_bases
ATGCTGGTCACTCTGATGAAGGCGAAGCTGCACCGGGCCACGGTCACCCAGGCCGACCTGGACTACGAGGGCTCCATCGC
CATCGACCGCGACCTGCTGGACGCGTCCGGCATCCTGCCGCACGAGCAGGTCGACGTGCTGAACATCACCACCGGCGCCC
GCTTCACCACCTACGCCATCGAGGCGCCCCGCGGCTCCAAGGTCATCGGCGTGAACGGCGCCGCCGCCCGGCTCGTTCAG
AAGGGCGACAAGGTGATCGTCGTCACCTATGGCATGCTGCCGGCCGAAGAGGCCCGCAACTATGCTCCGACGGTGGTGCT
GCTGGACGATGGGAACGAGATCAAGAAGGCGGCCTAA

Upstream 100 bases:

>100_bases
GAAGGCTTCATGCGTATATGCGCATCGCCTCCAAGCGGGCCCTGGCCTTTTGTGCGTGTCGCCCCCCGCGCCTGAAGCGT
ATCACGAGGACGTCTCCGCC

Downstream 100 bases:

>100_bases
GCGCCTCATCGCCGCGGGCCTGGCCGCAGGCCTGGCGGGCGGCCTCGCCGGCTGCGCGCCGGACGCGCCTCCTGGCGTCG
CCAAGGACCGTCTCGACGCC

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLVTLMKAKLHRATVTQADLDYEGSIAIDRDLLDASGILPHEQVDVLNITTGARFTTYAIEAPRGSKVIGVNGAAARLVQ
KGDKVIVVTYGMLPAEEARNYAPTVVLLDDGNEIKKAA

Sequences:

>Translated_118_residues
MLVTLMKAKLHRATVTQADLDYEGSIAIDRDLLDASGILPHEQVDVLNITTGARFTTYAIEAPRGSKVIGVNGAAARLVQ
KGDKVIVVTYGMLPAEEARNYAPTVVLLDDGNEIKKAA
>Mature_118_residues
MLVTLMKAKLHRATVTQADLDYEGSIAIDRDLLDASGILPHEQVDVLNITTGARFTTYAIEAPRGSKVIGVNGAAARLVQ
KGDKVIVVTYGMLPAEEARNYAPTVVLLDDGNEIKKAA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=118, Percent_Identity=52.5423728813559, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_PHEZH (B4RH30)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002131407.1
- GeneID:   6792091
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c2569
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 12635; Mature: 12635

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTLMKAKLHRATVTQADLDYEGSIAIDRDLLDASGILPHEQVDVLNITTGARFTTYAI
CEEEEEEHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
EAPRGSKVIGVNGAAARLVQKGDKVIVVTYGMLPAEEARNYAPTVVLLDDGNEIKKAA
ECCCCCEEEEECHHHHHHHHCCCEEEEEEECCCCHHHCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MLVTLMKAKLHRATVTQADLDYEGSIAIDRDLLDASGILPHEQVDVLNITTGARFTTYAI
CEEEEEEHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEE
EAPRGSKVIGVNGAAARLVQKGDKVIVVTYGMLPAEEARNYAPTVVLLDDGNEIKKAA
ECCCCCEEEEECHHHHHHHHCCCEEEEEEECCCCHHHCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA