| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is exuT [H]
Identifier: 197105915
GI number: 197105915
Start: 2806068
End: 2807354
Strand: Direct
Name: exuT [H]
Synonym: PHZ_c2454
Alternate gene names: 197105915
Gene position: 2806068-2807354 (Clockwise)
Preceding gene: 197105914
Following gene: 197105916
Centisome position: 70.22
GC content: 69.62
Gene sequence:
>1287_bases ATGGCCACAGCCGCCGAACGGACTGACGCCGCAGCCCCGCCCGCCGTCGTGGGCCGCTACCGCTGGGTGGTGGTGGGGCT CCTCTTTGCGGCGATGGTGATCAACTACGTCGATCGCCAGACCATCGGGCTGCTGAAGGCCGACCTCACCGCCGAGTTCG GCTGGAGCGAGACGGACTACGCCGACCTCGTCTTCTGGTTCCAGGCCGCCTACGCCATCGCCTACCTGGCCTGGGGCCGG GTCATCGACCGGATCGGCGCCCGCTGGGGCTTCGGCCTCGCCTTCCTGCTCTGGCACGTCGGCCACATCGCCACGGCCGG CGCCCGCTCGCTGAGCGGCTTCATCTTCGCCCGCGTCGTCCTGGGCCTGGGCGAAGGCGGCGCGTTCCCGGCCGGCATCA AGTCGGTGGCCGAGTGGTTCCCCAAGAAGGAGCGCGCGCTCGCCACCGGCATCTTCAACGCCGGCACCAACATCGGCGCC ATCGTCACGCCCCTGGTGATCCCGGCGATCACCCTGGCCTGGGGCTGGCAGGCGGCGTTCATCGTCACCGGCGTGGCGGG CCTCGTGTGGCTGCCCATCTGGCTGCTGGTCTACCGCCGGCCGCGCGAGCATCCGAAGGTCACCGCCGCCGAGCTGGCGC ACATCGAGCAGGATCCGCCGGACACGGTGGAGAAGGTCGCCTGGACCAAGCTGCTGCGCTACCGCGAGACCTGGGCCTAC GCGATCGGCAAGTTCCTGATCGACCCCGTCTGGTGGATGTTCCTGTTCTGGCTGCCGGACTTCCTCGGCAAGCGCCACGG CCTCGATCTGATGAGCTTCGGCCCGCCCCTGGTGGCCATCTACCTGCTCTCGGACGTCGGCAGCGTGGCCGGCGGCTGGA TGTCCTCGCGCTTCATGCACCTGGGCTGGTCGGTGAACCGCGCGCGCAAGATGACCATGCTGATCTGCGCCCTGCTGGCC CTGCCGGTGGCTTTCGCCGCCTTCGCCTCGAACCTGTGGGTCGCCGTGCTGATCATCGGCGTGGCCACCGCCGCCCACCA GGGCTTCTCGGCCAACCTCTACACCCTGCCCGGCGACGTCTTCCCGCGGGCGGCGGTGGGCTCGGTCGTCGGCATCGGCG GCATGCTGGGCGCCATCGGCGGCATGGTGATGTCGAAGTACGCCGGCTACGTGCTGGAGCAGATCGGCACCTACACCCCG ATCTTCGTGGTGGCCGCATCGGCCTACCTGCTGGCCCTGCTGGTCGTGCACATCCTCACGCCGAAGATGGAGCCGGTGAA GCTGTGA
Upstream 100 bases:
>100_bases ATCGAGGCCGGCCAATCGGCCCGAATCGTCTTCGGCGACCTGCAGGAGATCCGCTGCCAGGCGGTCACCGCGGCGCCGGA GGACCAGGGAGGAAACAACG
Downstream 100 bases:
>100_bases GGGCCGCCCCCGCGCTCCTGGGGGTCCTCGCACTCGGCGGGGCGGCGGGACTGGCGCTCGCCGCCCCGCCCGCCGTGTTC GTGAACGAGGCTGACGTCGT
Product: major facilitator family transporter
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MATAAERTDAAAPPAVVGRYRWVVVGLLFAAMVINYVDRQTIGLLKADLTAEFGWSETDYADLVFWFQAAYAIAYLAWGR VIDRIGARWGFGLAFLLWHVGHIATAGARSLSGFIFARVVLGLGEGGAFPAGIKSVAEWFPKKERALATGIFNAGTNIGA IVTPLVIPAITLAWGWQAAFIVTGVAGLVWLPIWLLVYRRPREHPKVTAAELAHIEQDPPDTVEKVAWTKLLRYRETWAY AIGKFLIDPVWWMFLFWLPDFLGKRHGLDLMSFGPPLVAIYLLSDVGSVAGGWMSSRFMHLGWSVNRARKMTMLICALLA LPVAFAAFASNLWVAVLIIGVATAAHQGFSANLYTLPGDVFPRAAVGSVVGIGGMLGAIGGMVMSKYAGYVLEQIGTYTP IFVVAASAYLLALLVVHILTPKMEPVKL
Sequences:
>Translated_428_residues MATAAERTDAAAPPAVVGRYRWVVVGLLFAAMVINYVDRQTIGLLKADLTAEFGWSETDYADLVFWFQAAYAIAYLAWGR VIDRIGARWGFGLAFLLWHVGHIATAGARSLSGFIFARVVLGLGEGGAFPAGIKSVAEWFPKKERALATGIFNAGTNIGA IVTPLVIPAITLAWGWQAAFIVTGVAGLVWLPIWLLVYRRPREHPKVTAAELAHIEQDPPDTVEKVAWTKLLRYRETWAY AIGKFLIDPVWWMFLFWLPDFLGKRHGLDLMSFGPPLVAIYLLSDVGSVAGGWMSSRFMHLGWSVNRARKMTMLICALLA LPVAFAAFASNLWVAVLIIGVATAAHQGFSANLYTLPGDVFPRAAVGSVVGIGGMLGAIGGMVMSKYAGYVLEQIGTYTP IFVVAASAYLLALLVVHILTPKMEPVKL >Mature_427_residues ATAAERTDAAAPPAVVGRYRWVVVGLLFAAMVINYVDRQTIGLLKADLTAEFGWSETDYADLVFWFQAAYAIAYLAWGRV IDRIGARWGFGLAFLLWHVGHIATAGARSLSGFIFARVVLGLGEGGAFPAGIKSVAEWFPKKERALATGIFNAGTNIGAI VTPLVIPAITLAWGWQAAFIVTGVAGLVWLPIWLLVYRRPREHPKVTAAELAHIEQDPPDTVEKVAWTKLLRYRETWAYA IGKFLIDPVWWMFLFWLPDFLGKRHGLDLMSFGPPLVAIYLLSDVGSVAGGWMSSRFMHLGWSVNRARKMTMLICALLAL PVAFAAFASNLWVAVLIIGVATAAHQGFSANLYTLPGDVFPRAAVGSVVGIGGMLGAIGGMVMSKYAGYVLEQIGTYTPI FVVAASAYLLALLVVHILTPKMEPVKL
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI154350196, Length=387, Percent_Identity=25.0645994832041, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI9966811, Length=377, Percent_Identity=25.9946949602122, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI9945322, Length=355, Percent_Identity=25.9154929577465, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI21322234, Length=351, Percent_Identity=24.5014245014245, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI6912666, Length=356, Percent_Identity=24.1573033707865, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI2367193, Length=403, Percent_Identity=32.5062034739454, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI2367379, Length=357, Percent_Identity=31.3725490196078, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI87082320, Length=432, Percent_Identity=28.7037037037037, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1789515, Length=436, Percent_Identity=25.2293577981651, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1789152, Length=449, Percent_Identity=26.2806236080178, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI87082071, Length=381, Percent_Identity=23.0971128608924, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17535049, Length=422, Percent_Identity=25.3554502369668, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17552542, Length=372, Percent_Identity=25.8064516129032, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI86561091, Length=204, Percent_Identity=30.3921568627451, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI25141316, Length=204, Percent_Identity=30.3921568627451, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533554, Length=313, Percent_Identity=27.1565495207668, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533556, Length=313, Percent_Identity=27.1565495207668, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25141318, Length=186, Percent_Identity=30.1075268817204, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17566884, Length=273, Percent_Identity=27.4725274725275, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25141341, Length=149, Percent_Identity=31.5436241610738, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560030, Length=221, Percent_Identity=23.9819004524887, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI24580790, Length=381, Percent_Identity=23.8845144356955, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24584153, Length=350, Percent_Identity=25.1428571428571, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641682, Length=389, Percent_Identity=24.1645244215938, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24583789, Length=378, Percent_Identity=23.8095238095238, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI19920686, Length=408, Percent_Identity=23.2843137254902, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24648416, Length=384, Percent_Identity=24.21875, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI21356189, Length=384, Percent_Identity=24.21875, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24654215, Length=391, Percent_Identity=24.5524296675192, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922400, Length=391, Percent_Identity=24.5524296675192, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI20130167, Length=387, Percent_Identity=25.3229974160207, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639764, Length=447, Percent_Identity=21.0290827740492, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI62484226, Length=381, Percent_Identity=23.0971128608924, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI20129235, Length=401, Percent_Identity=25.6857855361596, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI45550460, Length=255, Percent_Identity=24.7058823529412, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24655255, Length=255, Percent_Identity=24.7058823529412, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI221474708, Length=181, Percent_Identity=24.8618784530387, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46525; Mature: 46394
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAAERTDAAAPPAVVGRYRWVVVGLLFAAMVINYVDRQTIGLLKADLTAEFGWSETDY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ADLVFWFQAAYAIAYLAWGRVIDRIGARWGFGLAFLLWHVGHIATAGARSLSGFIFARVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGEGGAFPAGIKSVAEWFPKKERALATGIFNAGTNIGAIVTPLVIPAITLAWGWQAAF HHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH IVTGVAGLVWLPIWLLVYRRPREHPKVTAAELAHIEQDPPDTVEKVAWTKLLRYRETWAY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AIGKFLIDPVWWMFLFWLPDFLGKRHGLDLMSFGPPLVAIYLLSDVGSVAGGWMSSRFMH HHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGWSVNRARKMTMLICALLALPVAFAAFASNLWVAVLIIGVATAAHQGFSANLYTLPGDV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC FPRAAVGSVVGIGGMLGAIGGMVMSKYAGYVLEQIGTYTPIFVVAASAYLLALLVVHILT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC PKMEPVKL CCCCCCCC >Mature Secondary Structure ATAAERTDAAAPPAVVGRYRWVVVGLLFAAMVINYVDRQTIGLLKADLTAEFGWSETDY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ADLVFWFQAAYAIAYLAWGRVIDRIGARWGFGLAFLLWHVGHIATAGARSLSGFIFARVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGEGGAFPAGIKSVAEWFPKKERALATGIFNAGTNIGAIVTPLVIPAITLAWGWQAAF HHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH IVTGVAGLVWLPIWLLVYRRPREHPKVTAAELAHIEQDPPDTVEKVAWTKLLRYRETWAY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AIGKFLIDPVWWMFLFWLPDFLGKRHGLDLMSFGPPLVAIYLLSDVGSVAGGWMSSRFMH HHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGWSVNRARKMTMLICALLALPVAFAAFASNLWVAVLIIGVATAAHQGFSANLYTLPGDV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC FPRAAVGSVVGIGGMLGAIGGMVMSKYAGYVLEQIGTYTPIFVVAASAYLLALLVVHILT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC PKMEPVKL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]