| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105916
Identifier: 197105916
GI number: 197105916
Start: 2807285
End: 2807773
Strand: Direct
Name: 197105916
Synonym: PHZ_c2455
Alternate gene names: NA
Gene position: 2807285-2807773 (Clockwise)
Preceding gene: 197105915
Following gene: 197105918
Centisome position: 70.25
GC content: 73.01
Gene sequence:
>489_bases ATCGGCCTACCTGCTGGCCCTGCTGGTCGTGCACATCCTCACGCCGAAGATGGAGCCGGTGAAGCTGTGAGGGCCGCCCC CGCGCTCCTGGGGGTCCTCGCACTCGGCGGGGCGGCGGGACTGGCGCTCGCCGCCCCGCCCGCCGTGTTCGTGAACGAGG CTGACGTCGTCCGCCGCGAGCCGCCGCCGCACGGCGCCCACGGCATGAGCACCGCCTACCGGATCTCCGACGTCGTCCCC GGCCGGACGATGGAGTTCCGCAAGCGGGTCCTGCACCCCGGCGCCGCCGTCGGGCTGCACGTGATCGACCACGACGAGGT CTACTATGTGCTGTCCGGAGAGGGCGAGGTGACCTCGGACGGCGTCACCCGCCGGCTGGGCCCGGGCGGGGCGGCCTACC TCTATCGCGGCGCCGAGGTGGGGATCGCCCAGGTCGGCGACCAGGATCTCGTCCTGATCGTCTCCTATCCGCTGCCCGCG AAGCCCTAG
Upstream 100 bases:
>100_bases GCGGCATGCTGGGCGCCATCGGCGGCATGGTGATGTCGAAGTACGCCGGCTACGTGCTGGAGCAGATCGGCACCTACACC CCGATCTTCGTGGTGGCCGC
Downstream 100 bases:
>100_bases CCTTTCAGCGGGGCGGTGGAGTCCCGCACCACCAGGGACGGCAGCCGGTTCTTCGGGTCGCGGACGTCGTCGTCGCGGCC CAGCAGCCGCTCGACCGCCA
Product: cupin 2, conserved barrel
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel; Cupin 2 Domain-Containing Protein; Cupin 2 Barrel; Exported Rhamnogalacturonan Acetylesterase-Like; Secreted Protein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGLPAGPAGRAHPHAEDGAGEAVRAAPALLGVLALGGAAGLALAAPPAVFVNEADVVRREPPPHGAHGMSTAYRISDVVP GRTMEFRKRVLHPGAAVGLHVIDHDEVYYVLSGEGEVTSDGVTRRLGPGGAAYLYRGAEVGIAQVGDQDLVLIVSYPLPA KP
Sequences:
>Translated_162_residues MGLPAGPAGRAHPHAEDGAGEAVRAAPALLGVLALGGAAGLALAAPPAVFVNEADVVRREPPPHGAHGMSTAYRISDVVP GRTMEFRKRVLHPGAAVGLHVIDHDEVYYVLSGEGEVTSDGVTRRLGPGGAAYLYRGAEVGIAQVGDQDLVLIVSYPLPA KP >Mature_161_residues GLPAGPAGRAHPHAEDGAGEAVRAAPALLGVLALGGAAGLALAAPPAVFVNEADVVRREPPPHGAHGMSTAYRISDVVPG RTMEFRKRVLHPGAAVGLHVIDHDEVYYVLSGEGEVTSDGVTRRLGPGGAAYLYRGAEVGIAQVGDQDLVLIVSYPLPAK P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16563; Mature: 16432
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPAGPAGRAHPHAEDGAGEAVRAAPALLGVLALGGAAGLALAAPPAVFVNEADVVRRE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCHHHCCC PPPHGAHGMSTAYRISDVVPGRTMEFRKRVLHPGAAVGLHVIDHDEVYYVLSGEGEVTSD CCCCCCCCCCHHEEHHCCCCCCCHHHHHHHCCCCCEEEEEEEECCCEEEEECCCCCCCCC GVTRRLGPGGAAYLYRGAEVGIAQVGDQDLVLIVSYPLPAKP CCEEECCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCC >Mature Secondary Structure GLPAGPAGRAHPHAEDGAGEAVRAAPALLGVLALGGAAGLALAAPPAVFVNEADVVRRE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCHHHCCC PPPHGAHGMSTAYRISDVVPGRTMEFRKRVLHPGAAVGLHVIDHDEVYYVLSGEGEVTSD CCCCCCCCCCHHEEHHCCCCCCCHHHHHHHCCCCCEEEEEEEECCCEEEEECCCCCCCCC GVTRRLGPGGAAYLYRGAEVGIAQVGDQDLVLIVSYPLPAKP CCEEECCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA