Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is hyuE [H]

Identifier: 197105900

GI number: 197105900

Start: 2787948

End: 2788694

Strand: Reverse

Name: hyuE [H]

Synonym: PHZ_c2439

Alternate gene names: 197105900

Gene position: 2788694-2787948 (Counterclockwise)

Preceding gene: 197105904

Following gene: 197105899

Centisome position: 69.78

GC content: 66.4

Gene sequence:

>747_bases
ATGGTCACCGTTCACCTCGTCGTGCCAACCACGACCAAGTTCGAGTTCGCGGCGCCCCTCAGCTACCTGGAGGGGCCCGA
CCTCAAGCTCATGGAGTCGCATCTCGAGCGAGGGCCGGCGTCCATCGAATGCGAGTACGACGAGCTCGTGGCGGGTCCGG
AAACCGTGGCCGCAGCGATCCGTGCGCAGAACGATGGCGCGGACGCGATCGTCGTGGTGTGCATGGGGGACCCGGCCCTG
CACGCAGTCCGCGAAGCTGTGTCAGTGCCGGTCCTCGGGATCGGCGAGACCGCGATGCACTACGCGGCGATGCTGGGTCA
CAAGTTCAGCATCCTCTGCACGCTCGATCGGCGTCGGTCCTACTACGTGGACAAGGCGCGGCAGTACGGGCTCGACAGCA
AGCTGGCCTCGGTTCGAACGGTGAACACGCCGGTTCTCGCGATCGAGGATGACCACGCCTCCACCCTGGATCGACTTGTC
GAAGCTGCAGCGGTGGCGATCATCCAGGATGGCGCCGACGTGATCGTCCTCGGCTGCGGCTGCTTCAAGGACATGGATCG
GATGATGGAGGAGCGCCTCGCCGCCCGTGGCCTGGCCGTACCCGTCATCGATTCCCCGCCGTTGACCGTGCTGACTGCAG
CGGCGCTGGCGCGGACCCGCCTGTCGCACAGCAAGCGCGCCTACCCGATTCCGCCGGCCAAGGAGCGGCCTGGTTACGAC
GTGCCGTCTCTCAAAGAGCGGCGCTAA

Upstream 100 bases:

>100_bases
GTCTTGTCGGATCGCAGAATTTTTGTAATAGCATAATTTATGCTTTTAGAGCCCTAAGGGCCGGGCGTCGTCACGGCGCG
AATGAGCTGGGAGGAAGTAG

Downstream 100 bases:

>100_bases
CCGGACGCCCCGTCGCGTTCAAAAAAAACACTCAACAGGGGGCTTCATCATGCACCACACCAGGGCCATTCTGGCCATCG
GCACCGCGCTCGGATCGAGC

Product: Asp/Glu racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MVTVHLVVPTTTKFEFAAPLSYLEGPDLKLMESHLERGPASIECEYDELVAGPETVAAAIRAQNDGADAIVVVCMGDPAL
HAVREAVSVPVLGIGETAMHYAAMLGHKFSILCTLDRRRSYYVDKARQYGLDSKLASVRTVNTPVLAIEDDHASTLDRLV
EAAAVAIIQDGADVIVLGCGCFKDMDRMMEERLAARGLAVPVIDSPPLTVLTAAALARTRLSHSKRAYPIPPAKERPGYD
VPSLKERR

Sequences:

>Translated_248_residues
MVTVHLVVPTTTKFEFAAPLSYLEGPDLKLMESHLERGPASIECEYDELVAGPETVAAAIRAQNDGADAIVVVCMGDPAL
HAVREAVSVPVLGIGETAMHYAAMLGHKFSILCTLDRRRSYYVDKARQYGLDSKLASVRTVNTPVLAIEDDHASTLDRLV
EAAAVAIIQDGADVIVLGCGCFKDMDRMMEERLAARGLAVPVIDSPPLTVLTAAALARTRLSHSKRAYPIPPAKERPGYD
VPSLKERR
>Mature_248_residues
MVTVHLVVPTTTKFEFAAPLSYLEGPDLKLMESHLERGPASIECEYDELVAGPETVAAAIRAQNDGADAIVVVCMGDPAL
HAVREAVSVPVLGIGETAMHYAAMLGHKFSILCTLDRRRSYYVDKARQYGLDSKLASVRTVNTPVLAIEDDHASTLDRLV
EAAAVAIIQDGADVIVLGCGCFKDMDRMMEERLAARGLAVPVIDSPPLTVLTAAALARTRLSHSKRAYPIPPAKERPGYD
VPSLKERR

Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]

COG id: COG4126

COG function: function code E; Hydantoin racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.99.5 [H]

Molecular weight: Translated: 26805; Mature: 26805

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVHLVVPTTTKFEFAAPLSYLEGPDLKLMESHLERGPASIECEYDELVAGPETVAAAI
CEEEEEEECCCCCEEHHCCHHHHCCCCHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHH
RAQNDGADAIVVVCMGDPALHAVREAVSVPVLGIGETAMHYAAMLGHKFSILCTLDRRRS
HCCCCCCCEEEEEEECCHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCEEEEEEECCCCH
YYVDKARQYGLDSKLASVRTVNTPVLAIEDDHASTLDRLVEAAAVAIIQDGADVIVLGCG
HHHHHHHHCCCCHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHEECCCCEEEECCC
CFKDMDRMMEERLAARGLAVPVIDSPPLTVLTAAALARTRLSHSKRAYPIPPAKERPGYD
CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VPSLKERR
CCCCCCCC
>Mature Secondary Structure
MVTVHLVVPTTTKFEFAAPLSYLEGPDLKLMESHLERGPASIECEYDELVAGPETVAAAI
CEEEEEEECCCCCEEHHCCHHHHCCCCHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHH
RAQNDGADAIVVVCMGDPALHAVREAVSVPVLGIGETAMHYAAMLGHKFSILCTLDRRRS
HCCCCCCCEEEEEEECCHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCEEEEEEECCCCH
YYVDKARQYGLDSKLASVRTVNTPVLAIEDDHASTLDRLVEAAAVAIIQDGADVIVLGCG
HHHHHHHHCCCCHHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHEECCCCEEEECCC
CFKDMDRMMEERLAARGLAVPVIDSPPLTVLTAAALARTRLSHSKRAYPIPPAKERPGYD
CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VPSLKERR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339422 [H]