| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105904
Identifier: 197105904
GI number: 197105904
Start: 2791970
End: 2792776
Strand: Reverse
Name: 197105904
Synonym: PHZ_c2443
Alternate gene names: NA
Gene position: 2792776-2791970 (Counterclockwise)
Preceding gene: 197105905
Following gene: 197105900
Centisome position: 69.88
GC content: 74.35
Gene sequence:
>807_bases ATGCGTAGGGCGGCCCTGGTTCTCGCGGCGCTGCTCGCCGCCGCTCCGCCGCTGGCGCTGGCCGCCCCGGCCGCCGAACT CGTCCGCCGCCTCCCTGCAGAGGAGGCGCGGCAGGGCGTGGCGGTGGACGCCCGCCACCTCTACGCCGTCGATAATTCGA CCATCGCCAAGTACGACCGCCGCACGGGCCGCAAGGCAGCGGTCTGGACCGGCGACCCCGAGCGCTTCGCGCACCTGAAC TCCTGCGCCGTGATCCGGCGCGAGCTGGTCTGCGCGGCCTCCAACTACCCGGCGGTCCCGATGCGTAGCTCGGTGGAGGT GTTCGATCCCCGCCGCATGGTCCACCTGCGCTCGATCCCCCTTGGCCCCCAGCCCGGATCGCTGACCTGGGCCGACTGGA AGGACGGCGCCTGGTGGGCGGCCTTCGCCAACTACGACGGCCGCGGCGGCGAGCCCGGCCGCGACCATCGCCACACGACG CTGGTGAAGTTCGACCCGCGCTGGCGGCCCCTTGCGTCCTGGACCTTTCCGCCCAGCGTGCTGGAGCGCCTCAAGCCGCG CAGCGCCTCGGGCGGCGGCTGGGGGCCGGACGGGCGGCTCTACGTCACCGGCCACGACGCGGGAGAGATCTACGTGCTGC GCGCGCCCGAGGGCGGGGGCGTCCTCGAGCACCTGGCGACCCTGCCCGCGCCCATCCACGGCCAGGCCATCGCCTTCGAT CCGGCCGACCGGCGCACCGTCTTCGGCGTCAGCCGGCCCGATCGCCAGATCGTCGAGATGCGCCTCCCGCACGGCCTGCC GGAATAG
Upstream 100 bases:
>100_bases ACGGTGCGCTTCCGGGGGATCGAGAGCGCGCTCGTCCCGTCCTCCCCGGTGCGGGACCTCGCCCGGTTCGCGGTCGAGGC GGGGCGTGCGGGCCTCCAGC
Downstream 100 bases:
>100_bases GGTCGCTTTGCGCTTCGGCCCCGTCTCGCCTACCTAGGCGCGGTGAGCCGCCGCCCGCCCCATACCTTCTCCGTCGCGCC GATGATGGACTGGACGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MRRAALVLAALLAAAPPLALAAPAAELVRRLPAEEARQGVAVDARHLYAVDNSTIAKYDRRTGRKAAVWTGDPERFAHLN SCAVIRRELVCAASNYPAVPMRSSVEVFDPRRMVHLRSIPLGPQPGSLTWADWKDGAWWAAFANYDGRGGEPGRDHRHTT LVKFDPRWRPLASWTFPPSVLERLKPRSASGGGWGPDGRLYVTGHDAGEIYVLRAPEGGGVLEHLATLPAPIHGQAIAFD PADRRTVFGVSRPDRQIVEMRLPHGLPE
Sequences:
>Translated_268_residues MRRAALVLAALLAAAPPLALAAPAAELVRRLPAEEARQGVAVDARHLYAVDNSTIAKYDRRTGRKAAVWTGDPERFAHLN SCAVIRRELVCAASNYPAVPMRSSVEVFDPRRMVHLRSIPLGPQPGSLTWADWKDGAWWAAFANYDGRGGEPGRDHRHTT LVKFDPRWRPLASWTFPPSVLERLKPRSASGGGWGPDGRLYVTGHDAGEIYVLRAPEGGGVLEHLATLPAPIHGQAIAFD PADRRTVFGVSRPDRQIVEMRLPHGLPE >Mature_268_residues MRRAALVLAALLAAAPPLALAAPAAELVRRLPAEEARQGVAVDARHLYAVDNSTIAKYDRRTGRKAAVWTGDPERFAHLN SCAVIRRELVCAASNYPAVPMRSSVEVFDPRRMVHLRSIPLGPQPGSLTWADWKDGAWWAAFANYDGRGGEPGRDHRHTT LVKFDPRWRPLASWTFPPSVLERLKPRSASGGGWGPDGRLYVTGHDAGEIYVLRAPEGGGVLEHLATLPAPIHGQAIAFD PADRRTVFGVSRPDRQIVEMRLPHGLPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29355; Mature: 29355
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAALVLAALLAAAPPLALAAPAAELVRRLPAEEARQGVAVDARHLYAVDNSTIAKYDR CCHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCHHHHHCCCEECCEEEEEECCCHHHHHHH RTGRKAAVWTGDPERFAHLNSCAVIRRELVCAASNYPAVPMRSSVEVFDPRRMVHLRSIP HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEECCC LGPQPGSLTWADWKDGAWWAAFANYDGRGGEPGRDHRHTTLVKFDPRWRPLASWTFPPSV CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH LERLKPRSASGGGWGPDGRLYVTGHDAGEIYVLRAPEGGGVLEHLATLPAPIHGQAIAFD HHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEC PADRRTVFGVSRPDRQIVEMRLPHGLPE CCCCEEEEECCCCCHHHHHEECCCCCCC >Mature Secondary Structure MRRAALVLAALLAAAPPLALAAPAAELVRRLPAEEARQGVAVDARHLYAVDNSTIAKYDR CCHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCHHHHHCCCEECCEEEEEECCCHHHHHHH RTGRKAAVWTGDPERFAHLNSCAVIRRELVCAASNYPAVPMRSSVEVFDPRRMVHLRSIP HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEECCC LGPQPGSLTWADWKDGAWWAAFANYDGRGGEPGRDHRHTTLVKFDPRWRPLASWTFPPSV CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH LERLKPRSASGGGWGPDGRLYVTGHDAGEIYVLRAPEGGGVLEHLATLPAPIHGQAIAFD HHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEC PADRRTVFGVSRPDRQIVEMRLPHGLPE CCCCEEEEECCCCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA