| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105831
Identifier: 197105831
GI number: 197105831
Start: 2684456
End: 2686192
Strand: Reverse
Name: 197105831
Synonym: PHZ_c2370
Alternate gene names: NA
Gene position: 2686192-2684456 (Counterclockwise)
Preceding gene: 197105832
Following gene: 197105828
Centisome position: 67.22
GC content: 64.54
Gene sequence:
>1737_bases ATGGCAGAGAGAACGCAAACCCAGGACGCCGCGCCGCAACGCCAGTTCGATGCGATCGCGATGGAAGTCTTCAGCAATCG CATGCTCTCGATCACCGAGAACATGGCGATCCACATGATGCGGTCGTCCTATTCGGCGCAGATCAAGGAGCGCCGCGACT TCTCAGTCGGCATCTTCGACGCCCAAGGCCGCCTGATCGCCCAGGGCACCCACATTCCGATCCACCTTGGGTCACTGCTG GGATCGGTCGAAGCTCTGCTGGCTCGCTATCGGATCACCGACATGGTGGAGGGTGACGCCTTCATCTGCAACGATCCTTA TCTCGCCGGGGGGACGCACATGCCGGACGTCTCCATCGTCACCCCCGTGTTTATCGATGGCCAGGTGGCGGCCTTCGCCG CCAACATTGGGCACCATTCCGACCTCGGTGGTGCGGTTCCGGGCTCGATCTCACCCGACGCTCGCTCGATCTTCGAAGAA GGCCTTCGCCTTCCGATCATCCGGATCGCGCGAGGTGGCGAAATTGATGAGGACCTGCTCAACCTGATCGCGGCGAACTC GCGCATGCCAGAAGAGCGGCGCCTCGATCTCAGGGTTCAGGTCGCCGTCAACGTACGCGGCGGCGACGAGACGCGAGCCC TCTTCAAGCGCATGGGGCTGGCCAATGCGCAGGCCGCCGTGGAGGACGTGTTCGCCTACACAGCCGAGCGGCTGCGGCGG CGGATCTCTGCGCTCCCGGCAGGCGAGCACACCTTCCGGACCTGGCTCGACGACGACGGCGCCGGCAGCGGCCCGGTTCC TATCGTTGTCACTGCCAAGACTGGCGGCAATGCGCTCCATCTCGATCTTGAGGGCACTGGGCCCCAGGCCGGAGGCGCCT TCAACGTTCCGGCGAGCGCGCTCAGGGCGACGGTGTACTATTGCGTCAAAGCCCTGCTGGACCCGGAGCTGATGCCCAAC AGCGGCATGTTCGAAGCGGTGACGATCTCAGCGCCTAAGGGCTCGATCGCAAACCCCAACTATCCGGCGGCGACCGGCGT CCGAAGCAACACCTGTCAGAAGATCGCTGGCGCTGTATTCGGCGCTTTCCGGGGGCTCGTGCCGACCGATCGGCAGATCG CATCGAGTCACGATCTGCTTCCGTCCTTCTTTTTCTCTGGGGTGAATCCCGAAACCGGCCGCTTCTATGTATGCGCTGAG ACCGTCGGCGGGGGCAGCGGCGCTCGCGAAAACGACGACGGCGCGGACGCCATCCACGTGCATATCACGAACAGCCTGAA CTTGCCGACCGAGGCGATGGAGAACGAGTACCCGTTGCTCTGCGAGGGCTACTCGCTTGCCGTGGACTCAGGCGGCGCGG GCCGACAGCGCGGCGGTCTTGGTATCGTAAGGCATGTCCGAGCGCTGCAGGACAACACGGTCTTCTCCGCCAGATCCGAC GCCTACATCCATGGCGCCGAAGGAATTTATGGCGGTCGCACCGGGGGCCTGAGTTCCGTTATTCGCAATGCGGGCCGCGC CGATGAGCAGGTTCTGCCCACCAAGGTGCCGAACCTGGTGCTCGCCGCTGGGGAAAGCATTCGCGTGCAAACGCCGGGCG GCGGCGGCTTCGGCCCGTGTGACGAGCGGCCGCTCGGGGAGATCGCCCGGGATCTGAGGGACGGGATCATCACCCAGTCT GCGGCTGAACGAGACTATGGCGCGGCTCGAGTTCGCGAGGCCCTCAACCTGCTCTAG
Upstream 100 bases:
>100_bases GTCATCGAGGAAATGAGCTCCACGACCGTGGTGCTCCGCGGTCAGACCGCCACGATCGACGCCTACGGCAACATCATCAT CACGAGCTGAGCATCAGGCT
Downstream 100 bases:
>100_bases GACTGGAGGGGGCCCGGCCCGGCTCTGGGCGCCATCGGACCAGCCGTGTCCCGCCCAGAGCCGGGTCATCTTCCGGCTGG CGGGAGATGGCCGTCGAGCC
Product: N-methylhydantoinase B/acetone carboxylase, alpha subunit
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MAERTQTQDAAPQRQFDAIAMEVFSNRMLSITENMAIHMMRSSYSAQIKERRDFSVGIFDAQGRLIAQGTHIPIHLGSLL GSVEALLARYRITDMVEGDAFICNDPYLAGGTHMPDVSIVTPVFIDGQVAAFAANIGHHSDLGGAVPGSISPDARSIFEE GLRLPIIRIARGGEIDEDLLNLIAANSRMPEERRLDLRVQVAVNVRGGDETRALFKRMGLANAQAAVEDVFAYTAERLRR RISALPAGEHTFRTWLDDDGAGSGPVPIVVTAKTGGNALHLDLEGTGPQAGGAFNVPASALRATVYYCVKALLDPELMPN SGMFEAVTISAPKGSIANPNYPAATGVRSNTCQKIAGAVFGAFRGLVPTDRQIASSHDLLPSFFFSGVNPETGRFYVCAE TVGGGSGARENDDGADAIHVHITNSLNLPTEAMENEYPLLCEGYSLAVDSGGAGRQRGGLGIVRHVRALQDNTVFSARSD AYIHGAEGIYGGRTGGLSSVIRNAGRADEQVLPTKVPNLVLAAGESIRVQTPGGGGFGPCDERPLGEIARDLRDGIITQS AAERDYGAARVREALNLL
Sequences:
>Translated_578_residues MAERTQTQDAAPQRQFDAIAMEVFSNRMLSITENMAIHMMRSSYSAQIKERRDFSVGIFDAQGRLIAQGTHIPIHLGSLL GSVEALLARYRITDMVEGDAFICNDPYLAGGTHMPDVSIVTPVFIDGQVAAFAANIGHHSDLGGAVPGSISPDARSIFEE GLRLPIIRIARGGEIDEDLLNLIAANSRMPEERRLDLRVQVAVNVRGGDETRALFKRMGLANAQAAVEDVFAYTAERLRR RISALPAGEHTFRTWLDDDGAGSGPVPIVVTAKTGGNALHLDLEGTGPQAGGAFNVPASALRATVYYCVKALLDPELMPN SGMFEAVTISAPKGSIANPNYPAATGVRSNTCQKIAGAVFGAFRGLVPTDRQIASSHDLLPSFFFSGVNPETGRFYVCAE TVGGGSGARENDDGADAIHVHITNSLNLPTEAMENEYPLLCEGYSLAVDSGGAGRQRGGLGIVRHVRALQDNTVFSARSD AYIHGAEGIYGGRTGGLSSVIRNAGRADEQVLPTKVPNLVLAAGESIRVQTPGGGGFGPCDERPLGEIARDLRDGIITQS AAERDYGAARVREALNLL >Mature_577_residues AERTQTQDAAPQRQFDAIAMEVFSNRMLSITENMAIHMMRSSYSAQIKERRDFSVGIFDAQGRLIAQGTHIPIHLGSLLG SVEALLARYRITDMVEGDAFICNDPYLAGGTHMPDVSIVTPVFIDGQVAAFAANIGHHSDLGGAVPGSISPDARSIFEEG LRLPIIRIARGGEIDEDLLNLIAANSRMPEERRLDLRVQVAVNVRGGDETRALFKRMGLANAQAAVEDVFAYTAERLRRR ISALPAGEHTFRTWLDDDGAGSGPVPIVVTAKTGGNALHLDLEGTGPQAGGAFNVPASALRATVYYCVKALLDPELMPNS GMFEAVTISAPKGSIANPNYPAATGVRSNTCQKIAGAVFGAFRGLVPTDRQIASSHDLLPSFFFSGVNPETGRFYVCAET VGGGSGARENDDGADAIHVHITNSLNLPTEAMENEYPLLCEGYSLAVDSGGAGRQRGGLGIVRHVRALQDNTVFSARSDA YIHGAEGIYGGRTGGLSSVIRNAGRADEQVLPTKVPNLVLAAGESIRVQTPGGGGFGPCDERPLGEIARDLRDGIITQSA AERDYGAARVREALNLL
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=551, Percent_Identity=31.2159709618875, Blast_Score=212, Evalue=1e-54, Organism=Caenorhabditis elegans, GI133901900, Length=547, Percent_Identity=30.3473491773309, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI133901902, Length=514, Percent_Identity=29.5719844357977, Blast_Score=196, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6322634, Length=555, Percent_Identity=29.3693693693694, Blast_Score=226, Evalue=6e-60, Organism=Drosophila melanogaster, GI45550492, Length=549, Percent_Identity=30.7832422586521, Blast_Score=201, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 61419; Mature: 61288
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERTQTQDAAPQRQFDAIAMEVFSNRMLSITENMAIHMMRSSYSAQIKERRDFSVGIFD CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE AQGRLIAQGTHIPIHLGSLLGSVEALLARYRITDMVEGDAFICNDPYLAGGTHMPDVSIV CCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCEEEECCCEECCCCCCCCCEEE TPVFIDGQVAAFAANIGHHSDLGGAVPGSISPDARSIFEEGLRLPIIRIARGGEIDEDLL CEEEECCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHH NLIAANSRMPEERRLDLRVQVAVNVRGGDETRALFKRMGLANAQAAVEDVFAYTAERLRR HHHHHCCCCCHHHCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RISALPAGEHTFRTWLDDDGAGSGPVPIVVTAKTGGNALHLDLEGTGPQAGGAFNVPASA HHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHH LRATVYYCVKALLDPELMPNSGMFEAVTISAPKGSIANPNYPAATGVRSNTCQKIAGAVF HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GAFRGLVPTDRQIASSHDLLPSFFFSGVNPETGRFYVCAETVGGGSGARENDDGADAIHV HHHHCCCCCCHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEE HITNSLNLPTEAMENEYPLLCEGYSLAVDSGGAGRQRGGLGIVRHVRALQDNTVFSARSD EEECCCCCCHHHHCCCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCC AYIHGAEGIYGGRTGGLSSVIRNAGRADEQVLPTKVPNLVLAAGESIRVQTPGGGGFGPC CEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCC DERPLGEIARDLRDGIITQSAAERDYGAARVREALNLL CCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure AERTQTQDAAPQRQFDAIAMEVFSNRMLSITENMAIHMMRSSYSAQIKERRDFSVGIFD CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE AQGRLIAQGTHIPIHLGSLLGSVEALLARYRITDMVEGDAFICNDPYLAGGTHMPDVSIV CCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCEEEECCCEECCCCCCCCCEEE TPVFIDGQVAAFAANIGHHSDLGGAVPGSISPDARSIFEEGLRLPIIRIARGGEIDEDLL CEEEECCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHH NLIAANSRMPEERRLDLRVQVAVNVRGGDETRALFKRMGLANAQAAVEDVFAYTAERLRR HHHHHCCCCCHHHCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RISALPAGEHTFRTWLDDDGAGSGPVPIVVTAKTGGNALHLDLEGTGPQAGGAFNVPASA HHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHH LRATVYYCVKALLDPELMPNSGMFEAVTISAPKGSIANPNYPAATGVRSNTCQKIAGAVF HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GAFRGLVPTDRQIASSHDLLPSFFFSGVNPETGRFYVCAETVGGGSGARENDDGADAIHV HHHHCCCCCCHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEE HITNSLNLPTEAMENEYPLLCEGYSLAVDSGGAGRQRGGLGIVRHVRALQDNTVFSARSD EEECCCCCCHHHHCCCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCC AYIHGAEGIYGGRTGGLSSVIRNAGRADEQVLPTKVPNLVLAAGESIRVQTPGGGGFGPC CEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCC DERPLGEIARDLRDGIITQSAAERDYGAARVREALNLL CCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]