| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is hyuA [H]
Identifier: 197105832
GI number: 197105832
Start: 2686203
End: 2688254
Strand: Reverse
Name: hyuA [H]
Synonym: PHZ_c2371
Alternate gene names: 197105832
Gene position: 2688254-2686203 (Counterclockwise)
Preceding gene: 197105833
Following gene: 197105831
Centisome position: 67.27
GC content: 66.91
Gene sequence:
>2052_bases ATGGCTAAGGGTATGTATCGTATTGGCGTCGATGTAGGTGGAACGTTCACCGACTTCACGATCGAGAACGTGAGCAGCGG CGACTTTCTCTACTTCAAGCTTTCGTCCACGCCGGACGACCCGTCCGACGCCATCGTCAACGGCATCTCCCAGATCCTGG AGCTGTTCCAGATCGGGGCGGCCGAGATTTCCTACATCGGCCACGGCACGACCGTCGCGACCAACATGATCATCGAGCGG CGTGGGGTGCCGACCGGCCTCATCACCACCCAGGGCTTCCGGGATGTCCTGGCGATCGGGCGCCAGACGCGACCCGCCCT CTACGACGTCACCGTTAAACGCCCGCCGCCTCTGGTGGAGCGCTACCGCCGGCTGGAAGTCGCTGAGCGACTGAATGCAA AGGGCGAGGAGCTCTCCCCACTCGACGAGGCGGAACTCGAGCGGGTGCTCGACCAGCTTGCGGCCACGGGTGTCGAGGCG ATCGCGATATCGTTCCTCCACGCGTACAAGAACGCCGAACATGAGGTGGCCGCGGCCCGGATCGCCGCCCGCAAGCTTCC AGGCGTGTATGTAAGCACCTCGTCGAGCGTGCTCCCTGAATTCCGCGAGTTCGAGCGGACGTCGACGACCGTCCTCAACG CCTATGTCGGCCCGAGGATGGCGGCCTATTTCGACAGGCTGAAGGCCAAGATCGCCGAGCGGGGCATCTCCGTGGCTCCG ATGATCATTCACTCGAACGGCGGGCTGCTCTCCATCGACAGCGCAAAGCGCCTGCCGGTCACGACCTGCCTCTCCGGCCC GGCAGCCGGCGTGATCGGCGCTGCCGTCGTGGGGGCTGCCGCTGGAGTGCGGGATCTGGTCACGTTCGACGTGGGAGGCA CGAGCACCGATGTCTCGCTGGTCGTCGACGGCAAGCCCAAACTCGCCTCCAGTCGCGAGGTCGCCGGCTACCCCGTCCGT CTGCCGATGATCGACATTCATGTGATCGGGGCCGGGGGCGGAAGCATCGCGCAGGTCGACGACGCCCAGGCTCTCAAGGT TGGTCCGCGCAGCGCCGGCGCGCATCCCGGTCCCGTGGCCTACGGGCGCGGCGGCGACCTGCCAACGCTGACTGACGCCA ACATCTGCCTGAACAGGCTCAACCCCGTCGCGCTTCTTGACGGCCGCATGCCGGTGGATCGAGAGGCCGCCTGGACGAGC ATCGAGGAGAAGATCGCGCGGCCGCTCGGCATCTCGGTTGAGAAGGCCGCCTACGGCGTCATCCAGGTCGCCGCCGCCAA CATGAGCCGCGCCATTCGAGCGGTCACGACGGAGCAGGGACACGATGTCGGGGACATCGCTCTCTTCGCGTTCGGCGGCG CCGGTCCTCTGCATGCCTCCGAGGTGGCTCGCGAGTCGGGGATCCGCCGCATTCTCGTGCCGCAGGAACCCGGTACGATG TGCGCTCGGGGCGTGTTGTTGTCGGACGTGAGCCTCGACTTTGTGCGGATGCAGCTGACGGCCGCGACGCAGTCCTCCTG GGAGCGCGCCTGCGCGGCCTTGCGCGAGATGGCGGATGAGGGCGACCGGTGGCTGGCCGGCGAGAATGTCGAGCCCGAGC TGCGCCGCGCGGAGCTCGCGATCGACGCTCACTACGCTGGCCAGAGCCACGAACTGCGCGTGCCGCTTGAGGCGGCAGAC CCGTCGGGCCTCGACGATTTCCTCGCCCGGTTCGGCAACGCGCACGAGGCCGCCTTCGGATACCAGAACGCCGGCCAGCC GGTGTTTCTGGTGAGCTGCCGTCTGCGCGCGGTCGGCGTTGTTCCCAAGCAGCTTGAGCCCAGTCACAAGGGCGGCTCGA GCCTCGCGGCGGCAGAGACGGACGTGCGTTCCGTCTACTACGGGCCCGAGGAAGGCTGGCTTCAGACGCCGATTTTCCGT CGGTCCGCCCTGCCGGTCGGTACGAACGTCGTGGGACCCTGCGTCATCGAGGAAATGAGCTCCACGACCGTGGTGCTCCG CGGTCAGACCGCCACGATCGACGCCTACGGCAACATCATCATCACGAGCTGA
Upstream 100 bases:
>100_bases TGGACCTCAATGTCGCGCGCGTTACGGCGCGCGTAGCTCCCAGGCGGCAGGTGTTTCTGAGCTGAGCCGATGAAGGCTGG CGACGTCACCGGGAAGAAAG
Downstream 100 bases:
>100_bases GCATCAGGCTATGGCAGAGAGAACGCAAACCCAGGACGCCGCGCCGCAACGCCAGTTCGATGCGATCGCGATGGAAGTCT TCAGCAATCGCATGCTCTCG
Product: N-methylhydantoinase A/acetone carboxylase, beta subunit
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 683; Mature: 682
Protein sequence:
>683_residues MAKGMYRIGVDVGGTFTDFTIENVSSGDFLYFKLSSTPDDPSDAIVNGISQILELFQIGAAEISYIGHGTTVATNMIIER RGVPTGLITTQGFRDVLAIGRQTRPALYDVTVKRPPPLVERYRRLEVAERLNAKGEELSPLDEAELERVLDQLAATGVEA IAISFLHAYKNAEHEVAAARIAARKLPGVYVSTSSSVLPEFREFERTSTTVLNAYVGPRMAAYFDRLKAKIAERGISVAP MIIHSNGGLLSIDSAKRLPVTTCLSGPAAGVIGAAVVGAAAGVRDLVTFDVGGTSTDVSLVVDGKPKLASSREVAGYPVR LPMIDIHVIGAGGGSIAQVDDAQALKVGPRSAGAHPGPVAYGRGGDLPTLTDANICLNRLNPVALLDGRMPVDREAAWTS IEEKIARPLGISVEKAAYGVIQVAAANMSRAIRAVTTEQGHDVGDIALFAFGGAGPLHASEVARESGIRRILVPQEPGTM CARGVLLSDVSLDFVRMQLTAATQSSWERACAALREMADEGDRWLAGENVEPELRRAELAIDAHYAGQSHELRVPLEAAD PSGLDDFLARFGNAHEAAFGYQNAGQPVFLVSCRLRAVGVVPKQLEPSHKGGSSLAAAETDVRSVYYGPEEGWLQTPIFR RSALPVGTNVVGPCVIEEMSSTTVVLRGQTATIDAYGNIIITS
Sequences:
>Translated_683_residues MAKGMYRIGVDVGGTFTDFTIENVSSGDFLYFKLSSTPDDPSDAIVNGISQILELFQIGAAEISYIGHGTTVATNMIIER RGVPTGLITTQGFRDVLAIGRQTRPALYDVTVKRPPPLVERYRRLEVAERLNAKGEELSPLDEAELERVLDQLAATGVEA IAISFLHAYKNAEHEVAAARIAARKLPGVYVSTSSSVLPEFREFERTSTTVLNAYVGPRMAAYFDRLKAKIAERGISVAP MIIHSNGGLLSIDSAKRLPVTTCLSGPAAGVIGAAVVGAAAGVRDLVTFDVGGTSTDVSLVVDGKPKLASSREVAGYPVR LPMIDIHVIGAGGGSIAQVDDAQALKVGPRSAGAHPGPVAYGRGGDLPTLTDANICLNRLNPVALLDGRMPVDREAAWTS IEEKIARPLGISVEKAAYGVIQVAAANMSRAIRAVTTEQGHDVGDIALFAFGGAGPLHASEVARESGIRRILVPQEPGTM CARGVLLSDVSLDFVRMQLTAATQSSWERACAALREMADEGDRWLAGENVEPELRRAELAIDAHYAGQSHELRVPLEAAD PSGLDDFLARFGNAHEAAFGYQNAGQPVFLVSCRLRAVGVVPKQLEPSHKGGSSLAAAETDVRSVYYGPEEGWLQTPIFR RSALPVGTNVVGPCVIEEMSSTTVVLRGQTATIDAYGNIIITS >Mature_682_residues AKGMYRIGVDVGGTFTDFTIENVSSGDFLYFKLSSTPDDPSDAIVNGISQILELFQIGAAEISYIGHGTTVATNMIIERR GVPTGLITTQGFRDVLAIGRQTRPALYDVTVKRPPPLVERYRRLEVAERLNAKGEELSPLDEAELERVLDQLAATGVEAI AISFLHAYKNAEHEVAAARIAARKLPGVYVSTSSSVLPEFREFERTSTTVLNAYVGPRMAAYFDRLKAKIAERGISVAPM IIHSNGGLLSIDSAKRLPVTTCLSGPAAGVIGAAVVGAAAGVRDLVTFDVGGTSTDVSLVVDGKPKLASSREVAGYPVRL PMIDIHVIGAGGGSIAQVDDAQALKVGPRSAGAHPGPVAYGRGGDLPTLTDANICLNRLNPVALLDGRMPVDREAAWTSI EEKIARPLGISVEKAAYGVIQVAAANMSRAIRAVTTEQGHDVGDIALFAFGGAGPLHASEVARESGIRRILVPQEPGTMC ARGVLLSDVSLDFVRMQLTAATQSSWERACAALREMADEGDRWLAGENVEPELRRAELAIDAHYAGQSHELRVPLEAADP SGLDDFLARFGNAHEAAFGYQNAGQPVFLVSCRLRAVGVVPKQLEPSHKGGSSLAAAETDVRSVYYGPEEGWLQTPIFRR SALPVGTNVVGPCVIEEMSSTTVVLRGQTATIDAYGNIIITS
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=731, Percent_Identity=30.9165526675787, Blast_Score=235, Evalue=9e-62, Organism=Caenorhabditis elegans, GI133901900, Length=703, Percent_Identity=27.7382645803698, Blast_Score=216, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6322634, Length=734, Percent_Identity=30.1089918256131, Blast_Score=279, Evalue=8e-76, Organism=Drosophila melanogaster, GI45550492, Length=735, Percent_Identity=30.4761904761905, Blast_Score=267, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 72469; Mature: 72338
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGMYRIGVDVGGTFTDFTIENVSSGDFLYFKLSSTPDDPSDAIVNGISQILELFQIGA CCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC AEISYIGHGTTVATNMIIERRGVPTGLITTQGFRDVLAIGRQTRPALYDVTVKRPPPLVE HHEEEECCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCHHHH RYRRLEVAERLNAKGEELSPLDEAELERVLDQLAATGVEAIAISFLHAYKNAEHEVAAAR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH IAARKLPGVYVSTSSSVLPEFREFERTSTTVLNAYVGPRMAAYFDRLKAKIAERGISVAP HHHHHCCCEEEECCCHHHHHHHHHHHHHHHEEEHHHCHHHHHHHHHHHHHHHHCCCCEEE MIIHSNGGLLSIDSAKRLPVTTCLSGPAAGVIGAAVVGAAAGVRDLVTFDVGGTSTDVSL EEEECCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCEEEE VVDGKPKLASSREVAGYPVRLPMIDIHVIGAGGGSIAQVDDAQALKVGPRSAGAHPGPVA EECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEECCCCCCCCCCCCC YGRGGDLPTLTDANICLNRLNPVALLDGRMPVDREAAWTSIEEKIARPLGISVEKAAYGV CCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH IQVAAANMSRAIRAVTTEQGHDVGDIALFAFGGAGPLHASEVARESGIRRILVPQEPGTM HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCHH CARGVLLSDVSLDFVRMQLTAATQSSWERACAALREMADEGDRWLAGENVEPELRRAELA HHCCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHEEE IDAHYAGQSHELRVPLEAADPSGLDDFLARFGNAHEAAFGYQNAGQPVFLVSCRLRAVGV EEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEEEEEHEECC VPKQLEPSHKGGSSLAAAETDVRSVYYGPEEGWLQTPIFRRSALPVGTNVVGPCVIEEMS CCHHCCCCCCCCCCCCHHHCCCHHEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCC STTVVLRGQTATIDAYGNIIITS CCEEEEECCEEEEEECCCEEEEC >Mature Secondary Structure AKGMYRIGVDVGGTFTDFTIENVSSGDFLYFKLSSTPDDPSDAIVNGISQILELFQIGA CCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC AEISYIGHGTTVATNMIIERRGVPTGLITTQGFRDVLAIGRQTRPALYDVTVKRPPPLVE HHEEEECCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCHHHH RYRRLEVAERLNAKGEELSPLDEAELERVLDQLAATGVEAIAISFLHAYKNAEHEVAAAR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH IAARKLPGVYVSTSSSVLPEFREFERTSTTVLNAYVGPRMAAYFDRLKAKIAERGISVAP HHHHHCCCEEEECCCHHHHHHHHHHHHHHHEEEHHHCHHHHHHHHHHHHHHHHCCCCEEE MIIHSNGGLLSIDSAKRLPVTTCLSGPAAGVIGAAVVGAAAGVRDLVTFDVGGTSTDVSL EEEECCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCEEEE VVDGKPKLASSREVAGYPVRLPMIDIHVIGAGGGSIAQVDDAQALKVGPRSAGAHPGPVA EECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEECCCCCCCCCCCCC YGRGGDLPTLTDANICLNRLNPVALLDGRMPVDREAAWTSIEEKIARPLGISVEKAAYGV CCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH IQVAAANMSRAIRAVTTEQGHDVGDIALFAFGGAGPLHASEVARESGIRRILVPQEPGTM HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCHH CARGVLLSDVSLDFVRMQLTAATQSSWERACAALREMADEGDRWLAGENVEPELRRAELA HHCCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHEEE IDAHYAGQSHELRVPLEAADPSGLDDFLARFGNAHEAAFGYQNAGQPVFLVSCRLRAVGV EEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEEEEEHEECC VPKQLEPSHKGGSSLAAAETDVRSVYYGPEEGWLQTPIFRRSALPVGTNVVGPCVIEEMS CCHHCCCCCCCCCCCCHHHCCCHHEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCC STTVVLRGQTATIDAYGNIIITS CCEEEEECCEEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]