| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is eamA [H]
Identifier: 197105796
GI number: 197105796
Start: 2647532
End: 2648425
Strand: Reverse
Name: eamA [H]
Synonym: PHZ_c2334
Alternate gene names: 197105796
Gene position: 2648425-2647532 (Counterclockwise)
Preceding gene: 197105797
Following gene: 197105795
Centisome position: 66.27
GC content: 70.92
Gene sequence:
>894_bases ATGTCTTTCCGCGACTTCGGACTGTTGGCCCTCGTGTGCCTGCTCTGGGCCTCGAACAACATCGTCTCGAAGTACGTGAT CGCGACGCTGGGCGTCCCGCCGCTGTTCTACGCCGCCGTGCGGTTCGGCGTGGTCGCGCTAGCGGTGTTCCCCTGGCTGT TCCCCATGCCGCGCCCGGCCTGGCGGCTGATCGTCGTGGCGCTGCTGATGGGCGGCGGCAACTTCGCCCTGCTCTTCATG GGCCTGCAGACCGCGACCCCGTCCGCCGCCGCGGTGGTGGGGCAGGTGGGCGTGCCGATGACCACCCTGCTCTCGGTGCT GATGCTGGGCGAGCGCATCCGCTGGCGGCGCGGGATCGGCATCGCGCTGACCCTGGCCGGCGCCCTGACGGTGATGTGGG ATCCGGGCGGCTTCGCCCTCTCGGGCGGCCTGCTGTTCGTCGTCGCCTCCGCCTTCGCCGGCTCGCTGGGCGCGGTGATG ATGAAGCAGATGGAAGGCGTGAAGCCGCTGCAGTTCCAGGCCTGGGTGGGCCTGGCCTCGGTCGCGCCGCTGGCCCTGCT GTCGGCCCTCCTCGAGCCCGGCCAGGTGGAGGCGGGCCTGCGGGCCGGCTGGCCGTTCTGGGTGGGGGTGGTCTATTCGG CCGTGGTGATCTCGGTCGGCGCCCACACGCTCTACTACGCGCTCATCCAGCGCTACGAGGCCAACCTGATCTCGCCGTTG ACGCTGATGACCCCTCTGGCCACCATCGCGCTGGGCGTGGCGCTGCTGGGCGATCCCTTCGGCCCGCGCATGGCCATCGG CACGGCGGTGGCGCTCGCCGGGGTGCTGATCATCGCCCTGCGCCGCAACCAGGTGATGCCGCTGCTGCTCGCCGTCTGGA ACCGGTCCCAATGA
Upstream 100 bases:
>100_bases CGGGTGGAGGGGCCGTCCTCCACCCGTTCGTCCCGGTGACGCCCGGGATTCTCTGACCGCCATTGCCCGCCGCCCCGGGG CGGCCTAACCGGAAGCGGAC
Downstream 100 bases:
>100_bases CGCCCCCCATGACGCTCATCGAGGCGCCGTCGCCCAACTTCAACGCCCGCCTCGCCCCGCCGGACACGATCGTCCTGCAC TACACGGGGATGGAGACGGG
Product: permease of the drug/metabolite transporter (DMT) superfamily
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSFRDFGLLALVCLLWASNNIVSKYVIATLGVPPLFYAAVRFGVVALAVFPWLFPMPRPAWRLIVVALLMGGGNFALLFM GLQTATPSAAAVVGQVGVPMTTLLSVLMLGERIRWRRGIGIALTLAGALTVMWDPGGFALSGGLLFVVASAFAGSLGAVM MKQMEGVKPLQFQAWVGLASVAPLALLSALLEPGQVEAGLRAGWPFWVGVVYSAVVISVGAHTLYYALIQRYEANLISPL TLMTPLATIALGVALLGDPFGPRMAIGTAVALAGVLIIALRRNQVMPLLLAVWNRSQ
Sequences:
>Translated_297_residues MSFRDFGLLALVCLLWASNNIVSKYVIATLGVPPLFYAAVRFGVVALAVFPWLFPMPRPAWRLIVVALLMGGGNFALLFM GLQTATPSAAAVVGQVGVPMTTLLSVLMLGERIRWRRGIGIALTLAGALTVMWDPGGFALSGGLLFVVASAFAGSLGAVM MKQMEGVKPLQFQAWVGLASVAPLALLSALLEPGQVEAGLRAGWPFWVGVVYSAVVISVGAHTLYYALIQRYEANLISPL TLMTPLATIALGVALLGDPFGPRMAIGTAVALAGVLIIALRRNQVMPLLLAVWNRSQ >Mature_296_residues SFRDFGLLALVCLLWASNNIVSKYVIATLGVPPLFYAAVRFGVVALAVFPWLFPMPRPAWRLIVVALLMGGGNFALLFMG LQTATPSAAAVVGQVGVPMTTLLSVLMLGERIRWRRGIGIALTLAGALTVMWDPGGFALSGGLLFVVASAFAGSLGAVMM KQMEGVKPLQFQAWVGLASVAPLALLSALLEPGQVEAGLRAGWPFWVGVVYSAVVISVGAHTLYYALIQRYEANLISPLT LMTPLATIALGVALLGDPFGPRMAIGTAVALAGVLIIALRRNQVMPLLLAVWNRSQ
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=292, Percent_Identity=26.3698630136986, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31400; Mature: 31269
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRDFGLLALVCLLWASNNIVSKYVIATLGVPPLFYAAVRFGVVALAVFPWLFPMPRPA CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH WRLIVVALLMGGGNFALLFMGLQTATPSAAAVVGQVGVPMTTLLSVLMLGERIRWRRGIG HHHHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC IALTLAGALTVMWDPGGFALSGGLLFVVASAFAGSLGAVMMKQMEGVKPLQFQAWVGLAS CEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VAPLALLSALLEPGQVEAGLRAGWPFWVGVVYSAVVISVGAHTLYYALIQRYEANLISPL HHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TLMTPLATIALGVALLGDPFGPRMAIGTAVALAGVLIIALRRNQVMPLLLAVWNRSQ HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure SFRDFGLLALVCLLWASNNIVSKYVIATLGVPPLFYAAVRFGVVALAVFPWLFPMPRPA CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH WRLIVVALLMGGGNFALLFMGLQTATPSAAAVVGQVGVPMTTLLSVLMLGERIRWRRGIG HHHHHHHHHHCCCCEEEEEEEHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC IALTLAGALTVMWDPGGFALSGGLLFVVASAFAGSLGAVMMKQMEGVKPLQFQAWVGLAS CEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VAPLALLSALLEPGQVEAGLRAGWPFWVGVVYSAVVISVGAHTLYYALIQRYEANLISPL HHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH TLMTPLATIALGVALLGDPFGPRMAIGTAVALAGVLIIALRRNQVMPLLLAVWNRSQ HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]