| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is murB
Identifier: 197105783
GI number: 197105783
Start: 2632439
End: 2633341
Strand: Reverse
Name: murB
Synonym: PHZ_c2321
Alternate gene names: 197105783
Gene position: 2633341-2632439 (Counterclockwise)
Preceding gene: 197105784
Following gene: 197105782
Centisome position: 65.9
GC content: 72.31
Gene sequence:
>903_bases ATGACCTGGAAGGACAGGCTCCCCGCCGTCCGCGGCAAGCTCCTGCGGGACGAGCCGCTGGCGCCGTTCACCTGGTTCCG CGTCGGCGGGCCGGCGGACGTGATCTTCCTGCCCGAGGACGAGGACGATCTGGCCGCCTTCCTGAAGGCCCTGCCGGCCG AGGTTCCCGTGACGGTGCTGGGCGTCGGCTCCAACACCCTGGTCCGCGACGGCGGAGTGGACGGGGTGGTGATCCGCCTG GGCAAGGCCTTCGCCAAGGTCGAGCCGCGTGGCGAGGGACGCCTCTACGCCGGCGCCGCGGCCTTGGACGCCGTCGTCGC GCGCGAGGCTGGCAAGGCCGGCATCGCGGGCCTGGAGTTCTACCGCGGCGTGCCCGGCACGATCGGCGGGGCCCTGGTGA TGAACGCCGGCTGCTACGGCGCCGAGACCAAGGACGTGCTCGTCGAGGCCTATGCGCTGACCCGCGCGGGGGAGCGGCTG ACGCTCTCCAACGCCGACCTGGGCTACAGCTACCGCAAGTCGGCCCGCGCCGCCGCCGAGCCGCTGATCTTCCTGGGCGC CCTGTTCGAGGGCCGGCCCGACGACCCGGCCGCCATCGAGGCGCGCATGGCCGAGATCACCGAGCGGCGCGAGAAGACCC AGCCGATCCGCGAGAAGACTGGCGGCTCGACGTTCAAGAACCCGCCCGGCCACTCCTCCTGGAAGCTGGTGGACGAGGCC GGCTGGCGCGGCAAGCTGTTCGGCGGGGCGATGTTCTCGCCGCTGCACTCCAACTTCCTGATCAACACCGGCGAGGCGAC CGCCGCCGACCTCGAGGGCCTGGGCGAGGCGGTCCGCGCCGACGTGAAGGCCAAGTTCGGCGTCGACCTCGACTGGGAGA TCAAGCGGATCGGGCGTCCCTGA
Upstream 100 bases:
>100_bases CTGGGCGCCGGCGACATCACCAGCTGGGCCTACGCCCTGCCGGGCGAGCTCGAGGCCCTGAGCGCCTCGGGGGGCGCGGC CGCGGAATGAGCTGGCCCAA
Downstream 100 bases:
>100_bases GGCGCCCGGCGCGTTCCGCTACTGCCACGCTTGTCAGCAGGCGGCCTTGACGGAATCTCGCCGCCCGCGCACGCCGGGGC CATGCGCAATCTTGCTCTGC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTWKDRLPAVRGKLLRDEPLAPFTWFRVGGPADVIFLPEDEDDLAAFLKALPAEVPVTVLGVGSNTLVRDGGVDGVVIRL GKAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEFYRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERL TLSNADLGYSYRKSARAAAEPLIFLGALFEGRPDDPAAIEARMAEITERREKTQPIREKTGGSTFKNPPGHSSWKLVDEA GWRGKLFGGAMFSPLHSNFLINTGEATAADLEGLGEAVRADVKAKFGVDLDWEIKRIGRP
Sequences:
>Translated_300_residues MTWKDRLPAVRGKLLRDEPLAPFTWFRVGGPADVIFLPEDEDDLAAFLKALPAEVPVTVLGVGSNTLVRDGGVDGVVIRL GKAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEFYRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERL TLSNADLGYSYRKSARAAAEPLIFLGALFEGRPDDPAAIEARMAEITERREKTQPIREKTGGSTFKNPPGHSSWKLVDEA GWRGKLFGGAMFSPLHSNFLINTGEATAADLEGLGEAVRADVKAKFGVDLDWEIKRIGRP >Mature_299_residues TWKDRLPAVRGKLLRDEPLAPFTWFRVGGPADVIFLPEDEDDLAAFLKALPAEVPVTVLGVGSNTLVRDGGVDGVVIRLG KAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEFYRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERLT LSNADLGYSYRKSARAAAEPLIFLGALFEGRPDDPAAIEARMAEITERREKTQPIREKTGGSTFKNPPGHSSWKLVDEAG WRGKLFGGAMFSPLHSNFLINTGEATAADLEGLGEAVRADVKAKFGVDLDWEIKRIGRP
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_PHEZH (B4RFG1)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002131160.1 - GeneID: 6791842 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c2321 - HOGENOM: HBG686573 - OMA: SKKHAGF - ProtClustDB: PRK13905 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 32008; Mature: 31877
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 172-172 ACT_SITE 223-223 ACT_SITE 293-293
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWKDRLPAVRGKLLRDEPLAPFTWFRVGGPADVIFLPEDEDDLAAFLKALPAEVPVTVL CCCHHHCCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCEEEE GVGSNTLVRDGGVDGVVIRLGKAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEF ECCCCCEEECCCCCEEEEEHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHH YRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERLTLSNADLGYSYRKSARAAAE HCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHC PLIFLGALFEGRPDDPAAIEARMAEITERREKTQPIREKTGGSTFKNPPGHSSWKLVDEA HHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEECC GWRGKLFGGAMFSPLHSNFLINTGEATAADLEGLGEAVRADVKAKFGVDLDWEIKRIGRP CCCCEECCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC >Mature Secondary Structure TWKDRLPAVRGKLLRDEPLAPFTWFRVGGPADVIFLPEDEDDLAAFLKALPAEVPVTVL CCHHHCCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCEEEE GVGSNTLVRDGGVDGVVIRLGKAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEF ECCCCCEEECCCCCEEEEEHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHH YRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERLTLSNADLGYSYRKSARAAAE HCCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHC PLIFLGALFEGRPDDPAAIEARMAEITERREKTQPIREKTGGSTFKNPPGHSSWKLVDEA HHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEECC GWRGKLFGGAMFSPLHSNFLINTGEATAADLEGLGEAVRADVKAKFGVDLDWEIKRIGRP CCCCEECCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA