Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105782

Identifier: 197105782

GI number: 197105782

Start: 2630978

End: 2632357

Strand: Reverse

Name: 197105782

Synonym: PHZ_c2320

Alternate gene names: NA

Gene position: 2632357-2630978 (Counterclockwise)

Preceding gene: 197105783

Following gene: 197105780

Centisome position: 65.87

GC content: 73.19

Gene sequence:

>1380_bases
ATGCGCAATCTTGCTCTGCTGGCCGTCGGCGCCAGCCTCGTCCTCGCCGCCGCGCCCGCGGCCGCCCAGACGGTCAACCA
GGACATCTCCGCCTCGACCGCCGCCGTCCGCGACGCGGCGCTGAAGGATCCCACCGCCTGGGACATCGCCGAGTCCCTCA
CGACCGAGATCGGTCCGCGCCTGGTGGGCTCGCCCGCCATGGACCGCGCCCGCGACTGGGGCGTCGAAACGCTCAAGCGG
CTCGGCTTCCAGAACGTCAAGGTCGAGACCTTCACCGCCTCGGGCTGGTTCCGCGGCGAGGAGAGCGCCGAGGTGGTCGG
GCCCTATCCGCACAAGCTGCACATCCTGGGCCTCGGCGGCTCCTCGTCGACGCCGAAGGGCGGGCTGACGGCGGAGGTGG
CGCTGTTCCGCACCTATGAGGAGATGCTGGCCCAGCCGGAGGGCGCGCTGAAGGGCAAGATCGCGGTCGTCACCGGCGTG
ATGACCCGCGCCCAGGACGGATCGGGCTACGGCGCCATCAACGCCCAGCGCAGCCAGGGGCCGGTCGAGGCCGCCAAGCG
CGGCGCCGTCGCCTATCTGATCCGCTCGCTCTCCACCGACGACACCCGCCTGCCGCACGCGGGCGGCGCCCGGCCGGGCG
GCATCCCCGCCGCGGCGCTGTCCACGCCCGACGCCGACCTGCTGGAGCGCATGGTCGCCCGCGGCAAGCCGGTGACCCTC
AAGCTCGCCATGACCTCGCGCTACGAGGCGAAGGTCCCCGCCTACAACATCTCGGGCGAACTGCCCGGGACCGACCCCGA
CGCCGGCGTGCTGATCGTCGGCGGCCACCTGGACTCCTGGGACGCCGGCACCGGCGCCGTGGACGACGCCGCCGGCATCG
CCATCACGACGGCCGCCGCCAAGCTGGCCGCCGGCCAGGGGCCGCTGCGCCGCACGATCCGCGTGGTCATGTGGGGCTCT
GAGGAGCAGGGCGGCTCCAGCGAGGCCTACCTCGCCGCCCACAAGGACGAGGTCGGCAGGATGGTCGTGGTCGGCGAGAG
CGATTCCGGCGCCGGCCGCATCTGGACCATCCGCCTGCCGCAGGCGGGCCGCGACCATGTGGCGATGAAGGCCTTCCGGG
CCGCCGTCGCGCCGCTGAACGCCATCGTCAGCCGCGAGGCCCCCCGCTTCGGCGGGGCCGACGTCTCGGGCCTGATCCAG
GCGGGCGCGCCGTTCGTCGAGTTCGAGCAGGACGCCAGCCGCTATTTCGATCTGCACCACTCGGCCGACGACACGCTGGA
CAAGATCGACCCGGCGGAACTGTCGCAGAACGTCGCCGTCTGGGCCGCCTTCCTCCACGCGGCCGCTGCAAGCGACGTGG
ACTTCCGGGCGAAGCCCTAG

Upstream 100 bases:

>100_bases
GCGGATCGGGCGTCCCTGAGGCGCCCGGCGCGTTCCGCTACTGCCACGCTTGTCAGCAGGCGGCCTTGACGGAATCTCGC
CGCCCGCGCACGCCGGGGCC

Downstream 100 bases:

>100_bases
CCCAGCGCCTTCTCGGCGGGGACCAGGCGGGCGCTCGCGGTTCCGCGGGCGACGAGCACGCCGTCGGCGTCGCTCAGGCG
GCCTTCGAGGAAGGCGATGC

Product: aminopeptidase

Products: NA

Alternate protein names: Peptidase; Aminopeptidase; M28 Family Peptidase; M28D Family Peptidase; Peptidase Family; Endoribonuclease L-PSP

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MRNLALLAVGASLVLAAAPAAAQTVNQDISASTAAVRDAALKDPTAWDIAESLTTEIGPRLVGSPAMDRARDWGVETLKR
LGFQNVKVETFTASGWFRGEESAEVVGPYPHKLHILGLGGSSSTPKGGLTAEVALFRTYEEMLAQPEGALKGKIAVVTGV
MTRAQDGSGYGAINAQRSQGPVEAAKRGAVAYLIRSLSTDDTRLPHAGGARPGGIPAAALSTPDADLLERMVARGKPVTL
KLAMTSRYEAKVPAYNISGELPGTDPDAGVLIVGGHLDSWDAGTGAVDDAAGIAITTAAAKLAAGQGPLRRTIRVVMWGS
EEQGGSSEAYLAAHKDEVGRMVVVGESDSGAGRIWTIRLPQAGRDHVAMKAFRAAVAPLNAIVSREAPRFGGADVSGLIQ
AGAPFVEFEQDASRYFDLHHSADDTLDKIDPAELSQNVAVWAAFLHAAAASDVDFRAKP

Sequences:

>Translated_459_residues
MRNLALLAVGASLVLAAAPAAAQTVNQDISASTAAVRDAALKDPTAWDIAESLTTEIGPRLVGSPAMDRARDWGVETLKR
LGFQNVKVETFTASGWFRGEESAEVVGPYPHKLHILGLGGSSSTPKGGLTAEVALFRTYEEMLAQPEGALKGKIAVVTGV
MTRAQDGSGYGAINAQRSQGPVEAAKRGAVAYLIRSLSTDDTRLPHAGGARPGGIPAAALSTPDADLLERMVARGKPVTL
KLAMTSRYEAKVPAYNISGELPGTDPDAGVLIVGGHLDSWDAGTGAVDDAAGIAITTAAAKLAAGQGPLRRTIRVVMWGS
EEQGGSSEAYLAAHKDEVGRMVVVGESDSGAGRIWTIRLPQAGRDHVAMKAFRAAVAPLNAIVSREAPRFGGADVSGLIQ
AGAPFVEFEQDASRYFDLHHSADDTLDKIDPAELSQNVAVWAAFLHAAAASDVDFRAKP
>Mature_459_residues
MRNLALLAVGASLVLAAAPAAAQTVNQDISASTAAVRDAALKDPTAWDIAESLTTEIGPRLVGSPAMDRARDWGVETLKR
LGFQNVKVETFTASGWFRGEESAEVVGPYPHKLHILGLGGSSSTPKGGLTAEVALFRTYEEMLAQPEGALKGKIAVVTGV
MTRAQDGSGYGAINAQRSQGPVEAAKRGAVAYLIRSLSTDDTRLPHAGGARPGGIPAAALSTPDADLLERMVARGKPVTL
KLAMTSRYEAKVPAYNISGELPGTDPDAGVLIVGGHLDSWDAGTGAVDDAAGIAITTAAAKLAAGQGPLRRTIRVVMWGS
EEQGGSSEAYLAAHKDEVGRMVVVGESDSGAGRIWTIRLPQAGRDHVAMKAFRAAVAPLNAIVSREAPRFGGADVSGLIQ
AGAPFVEFEQDASRYFDLHHSADDTLDKIDPAELSQNVAVWAAFLHAAAASDVDFRAKP

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7706387, Length=390, Percent_Identity=34.3589743589744, Blast_Score=211, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47785; Mature: 47785

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLALLAVGASLVLAAAPAAAQTVNQDISASTAAVRDAALKDPTAWDIAESLTTEIGPR
CCCEEEEEEHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH
LVGSPAMDRARDWGVETLKRLGFQNVKVETFTASGWFRGEESAEVVGPYPHKLHILGLGG
HCCCCCHHHHHHCCHHHHHHCCCCCEEEEEEEECCEECCCCCCCEECCCCCEEEEEEECC
SSSTPKGGLTAEVALFRTYEEMLAQPEGALKGKIAVVTGVMTRAQDGSGYGAINAQRSQG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCEECCCCCCC
PVEAAKRGAVAYLIRSLSTDDTRLPHAGGARPGGIPAAALSTPDADLLERMVARGKPVTL
CHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCEEE
KLAMTSRYEAKVPAYNISGELPGTDPDAGVLIVGGHLDSWDAGTGAVDDAAGIAITTAAA
EEEECCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEHHHH
KLAAGQGPLRRTIRVVMWGSEEQGGSSEAYLAAHKDEVGRMVVVGESDSGAGRIWTIRLP
HHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECC
QAGRDHVAMKAFRAAVAPLNAIVSREAPRFGGADVSGLIQAGAPFVEFEQDASRYFDLHH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHEECCC
SADDTLDKIDPAELSQNVAVWAAFLHAAAASDVDFRAKP
CCCCHHHCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRNLALLAVGASLVLAAAPAAAQTVNQDISASTAAVRDAALKDPTAWDIAESLTTEIGPR
CCCEEEEEEHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH
LVGSPAMDRARDWGVETLKRLGFQNVKVETFTASGWFRGEESAEVVGPYPHKLHILGLGG
HCCCCCHHHHHHCCHHHHHHCCCCCEEEEEEEECCEECCCCCCCEECCCCCEEEEEEECC
SSSTPKGGLTAEVALFRTYEEMLAQPEGALKGKIAVVTGVMTRAQDGSGYGAINAQRSQG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCEECCCCCCC
PVEAAKRGAVAYLIRSLSTDDTRLPHAGGARPGGIPAAALSTPDADLLERMVARGKPVTL
CHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCEEE
KLAMTSRYEAKVPAYNISGELPGTDPDAGVLIVGGHLDSWDAGTGAVDDAAGIAITTAAA
EEEECCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEHHHH
KLAAGQGPLRRTIRVVMWGSEEQGGSSEAYLAAHKDEVGRMVVVGESDSGAGRIWTIRLP
HHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEECC
QAGRDHVAMKAFRAAVAPLNAIVSREAPRFGGADVSGLIQAGAPFVEFEQDASRYFDLHH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHEECCC
SADDTLDKIDPAELSQNVAVWAAFLHAAAASDVDFRAKP
CCCCHHHCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA