| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105757
Identifier: 197105757
GI number: 197105757
Start: 2601072
End: 2601833
Strand: Reverse
Name: 197105757
Synonym: PHZ_c2295
Alternate gene names: NA
Gene position: 2601833-2601072 (Counterclockwise)
Preceding gene: 197105762
Following gene: 197105756
Centisome position: 65.11
GC content: 71.92
Gene sequence:
>762_bases ATGGCCATGGCCGCCGACACCGCCGACTTCCGCCCCGCTGGGCGGGCGAGCTCCACCAAGATGGACTGGGGCCACGCGCT GCGCTCGCTGCGCCGCCTGCTGCGCGACAAGGAAGACACCCGCCAGGTGTTCGAGATCATGCGCGCCCTGAACGGCGCCT CGACCGCCAAGGGCTACCAGCGGCTGCTCGCGACCCCGGAGGGCGGACGGATCGCCTACGAGCGCGAGGAGTTCGCCCAG CGGCTGATGGACGACGCCTGGCTGGACAGCCTGCCCGAGGGCAGCGTCGGCGCCGCCTATCGCGACTTCATCCGCGCGGA GAACCTCTCGGCCGAAGGCCTGGCCATGGTGAGCCGCGAAGGCGCCGAGGCGATCGACGAGCCGCACCCCTACGCCTGGT TCGGCCGGCGCACCCGCGACGTCCACGACATATGGCACATCCTGTCGGGCTACGGCCGCGACGGCCTGGGCGAGGCGTGC CTGGTGGCCTTCTCCTACGCCCAGACCAAGGGGCTCGGCTGGGCGCTGATCGCCTTCGGGGCGGCGAGCCGGGCGCGGGA GAACAGGCAGTATCCCTACGTGAAGGCCATCTGGCAGGGCTACCAGCGGGGCAAGGCCGCCAAATGGCTGCTGGGCGAGG ACTACGGCCGGCTGCTGGCCGAGCCGCTGGACGCGGCCCGCCGGCGGCTGAACATCACCCCGCCCACGATCTACGATTCC ATCCCGCCGGAATTCCGCGACGAGGCCGTGCCCCAGCGCTAG
Upstream 100 bases:
>100_bases GTCGCAAGTCTACAAACCTTGGCGCCTCATGTCCCCTTGCATAAAGATGACGGGGGCGTCATTTTCTGTTTCGTAACGAA GCTGGAATATCGACCCTACG
Downstream 100 bases:
>100_bases TCCTCGCGCTTCTTCCCCTCGATATCGCGGCGGGCGCGCTCGGCTTCCAGCCTGGAGACCGCCCTCTCTCCCTTGGTGCG CCCGAACCGGACCCGGTTCT
Product: uncharacterized protein involved in ubiquinone biosynthesis
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAMAADTADFRPAGRASSTKMDWGHALRSLRRLLRDKEDTRQVFEIMRALNGASTAKGYQRLLATPEGGRIAYEREEFAQ RLMDDAWLDSLPEGSVGAAYRDFIRAENLSAEGLAMVSREGAEAIDEPHPYAWFGRRTRDVHDIWHILSGYGRDGLGEAC LVAFSYAQTKGLGWALIAFGAASRARENRQYPYVKAIWQGYQRGKAAKWLLGEDYGRLLAEPLDAARRRLNITPPTIYDS IPPEFRDEAVPQR
Sequences:
>Translated_253_residues MAMAADTADFRPAGRASSTKMDWGHALRSLRRLLRDKEDTRQVFEIMRALNGASTAKGYQRLLATPEGGRIAYEREEFAQ RLMDDAWLDSLPEGSVGAAYRDFIRAENLSAEGLAMVSREGAEAIDEPHPYAWFGRRTRDVHDIWHILSGYGRDGLGEAC LVAFSYAQTKGLGWALIAFGAASRARENRQYPYVKAIWQGYQRGKAAKWLLGEDYGRLLAEPLDAARRRLNITPPTIYDS IPPEFRDEAVPQR >Mature_252_residues AMAADTADFRPAGRASSTKMDWGHALRSLRRLLRDKEDTRQVFEIMRALNGASTAKGYQRLLATPEGGRIAYEREEFAQR LMDDAWLDSLPEGSVGAAYRDFIRAENLSAEGLAMVSREGAEAIDEPHPYAWFGRRTRDVHDIWHILSGYGRDGLGEACL VAFSYAQTKGLGWALIAFGAASRARENRQYPYVKAIWQGYQRGKAAKWLLGEDYGRLLAEPLDAARRRLNITPPTIYDSI PPEFRDEAVPQR
Specific function: Unknown
COG id: COG5031
COG function: function code H; Uncharacterized protein involved in ubiquinone biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI166795285, Length=175, Percent_Identity=30.8571428571429, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28468; Mature: 28337
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00334 MYB_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMAADTADFRPAGRASSTKMDWGHALRSLRRLLRDKEDTRQVFEIMRALNGASTAKGYQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH RLLATPEGGRIAYEREEFAQRLMDDAWLDSLPEGSVGAAYRDFIRAENLSAEGLAMVSRE HHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHC GAEAIDEPHPYAWFGRRTRDVHDIWHILSGYGRDGLGEACLVAFSYAQTKGLGWALIAFG CHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AASRARENRQYPYVKAIWQGYQRGKAAKWLLGEDYGRLLAEPLDAARRRLNITPPTIYDS HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC IPPEFRDEAVPQR CCCHHHHCCCCCC >Mature Secondary Structure AMAADTADFRPAGRASSTKMDWGHALRSLRRLLRDKEDTRQVFEIMRALNGASTAKGYQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH RLLATPEGGRIAYEREEFAQRLMDDAWLDSLPEGSVGAAYRDFIRAENLSAEGLAMVSRE HHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHC GAEAIDEPHPYAWFGRRTRDVHDIWHILSGYGRDGLGEACLVAFSYAQTKGLGWALIAFG CHHHHCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AASRARENRQYPYVKAIWQGYQRGKAAKWLLGEDYGRLLAEPLDAARRRLNITPPTIYDS HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC IPPEFRDEAVPQR CCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA