| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105756
Identifier: 197105756
GI number: 197105756
Start: 2599157
End: 2600818
Strand: Reverse
Name: 197105756
Synonym: PHZ_c2294
Alternate gene names: NA
Gene position: 2600818-2599157 (Counterclockwise)
Preceding gene: 197105757
Following gene: 197105755
Centisome position: 65.08
GC content: 74.37
Gene sequence:
>1662_bases GTGGAGAATAGCCGTCTTGCGGCATGGCTGGGTCTTCCCCGCAGCCTTCCGGTCCTGGTGTTGGTCATCGGCCTCATCGC CAGCCTGGCGGCCGGCCTGCAGGTCCAGCGGGTCGCCGAGGCCAAGGACCGCGAGCGCTTCAACAACGCCGTCGCACAGG CGCACGCGGCGGTGGCGGCCCGGCTGCAGACCTATACGGCCGCCCTTCGCGGCGGGACCGGGCTGTTCGCCGCCCGCCCC GGCGGGGCGGTGACGCGCGAGGAGTTCCGCGCCTACGCCGAGCGGCTGGACCTGCCGCAGGTCTATCCGGGCATCCAGGG GCTGGGGTTCAGCGCCAAGCTGCCGGGCCTGGCGGGCCCCGAAACCGCGGCGATGCTGGCGCGCCACGGCGTGCCCGGCC TGGAGATCCATCCCTCCCACCCGCGGCCGGAAGTCCACGCCATCCTGTTCCTGGAGCCCTTGGACCGGCGCAACCGCGCG GCCCTGGGCTACGACATGTATTCCAACGCGGTGCGCCGGGCCGCCATGGCCGCCGCCCGGGACACCGGCCGCGGGGCGAT GTCGGGCAAGGTGGAGCTGGTCCAGGAGATCGATCGGGACAAGCAGGCCGGCTTCCTGATCTACCACCCGGTCTATCGCG ACGGGGGCGTGCCCGAGACGGTCGCGCAGCGGCGGGCCCAGCTGATCGGCTTCGTCTACGCCCCGTTCCGGGCGGACGAC CTGCTGCGCGGCATCTTCGGCGACCAGCCCAATCCCCGCGTCCGGATGTTCGTCTACGACGAGACGGTCGCGCCCGAGAA CCTGCTGCACGCCTCGACCGGCCGGGCGCCCGATCCCGCGCGGTTCACGGCGAGCCGCGACCTCGAGATCGGCGGGCGGC GCTGGCGGATCGTCTACGCCGCAGCGCCGGGCCTGGAGGAGGGCTCCACCCGCGGCCTGGCGTTCGTCTTCTTCGTCGGC GGCATGCTGGCGACGGGCCTGGTGGCCTTCGCGACCTGGCGGCAGGTGCGGGCGCGCCTGACGGCCGAGGACGAGATCGC GGCCCGGCGGGAGGCCGAGCACGAGCGAGAGCTGCTGGTGGCCGAGCTGAACCACCGGGTGAAGAACACCCTGGCGACCG TCCAGTCGATCGCCGCCCAGAGCCTGCGCGAGGGTCGCTCGGCCGCGGAGACGCGCGAGACCTTCGAGGCCCGGCTGCTG GCGCTCAGCCACACCCACAACCTCCTGACCCGCGCCCACTGGCGGGGCGCGGACCTGCGGGAGATCGTCCGGCAGGAGCT GTCCCCCCACGGCGAGGGGCGGGTGCGGATCGACGGCGGGCCGGTCTCGCTGCCGCCAGCCGCCTCGCTGGCCGTGGGCA TGGCCCTGCACGAGCTGGCCACCAACGCGGCCAAGTACGGCGCGCTGAGCCGGCCGGAGGGGCAGGTGGCCGTCGCCTGG CAGGTGATCGGGCGGGCCGAGGCGCGGCGCGTCCGGCTTACCTGGCGGGAGATCGGCGGGCCGCCGGTCGCCGAGGCGCC GCGGCGGCGCGGCTTTGGCACCCGCCTGATCACCCAGGGGCTGAAGCAGCAGCTGGAGGGCGAGGTCGAGATGGACTTCC GCTCCTCGGGGCTCGTCTGCGTGCTGGAGTTTCCGCTCAGGGCCCCCGCCGAGGCGGCCTGA
Upstream 100 bases:
>100_bases AGGTTGATGAGATCGGCCATGGCTCCATCCTCCGCCATCGGCGTTGAAGCTATGCGAGCAGGGTTCGGGAAGCCAGACGG GAGCGGCGTTGCCTGAGGGC
Downstream 100 bases:
>100_bases AACCGCCTTCGCTCACGCCCGTTGCAGCCCTGCCGACAGGGCGGCGCAAGGGAAATGGAGCGAGCGCATGGTTCAACCTT CCGAGATCGTCCAGCACATG
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MENSRLAAWLGLPRSLPVLVLVIGLIASLAAGLQVQRVAEAKDRERFNNAVAQAHAAVAARLQTYTAALRGGTGLFAARP GGAVTREEFRAYAERLDLPQVYPGIQGLGFSAKLPGLAGPETAAMLARHGVPGLEIHPSHPRPEVHAILFLEPLDRRNRA ALGYDMYSNAVRRAAMAAARDTGRGAMSGKVELVQEIDRDKQAGFLIYHPVYRDGGVPETVAQRRAQLIGFVYAPFRADD LLRGIFGDQPNPRVRMFVYDETVAPENLLHASTGRAPDPARFTASRDLEIGGRRWRIVYAAAPGLEEGSTRGLAFVFFVG GMLATGLVAFATWRQVRARLTAEDEIAARREAEHERELLVAELNHRVKNTLATVQSIAAQSLREGRSAAETRETFEARLL ALSHTHNLLTRAHWRGADLREIVRQELSPHGEGRVRIDGGPVSLPPAASLAVGMALHELATNAAKYGALSRPEGQVAVAW QVIGRAEARRVRLTWREIGGPPVAEAPRRRGFGTRLITQGLKQQLEGEVEMDFRSSGLVCVLEFPLRAPAEAA
Sequences:
>Translated_553_residues MENSRLAAWLGLPRSLPVLVLVIGLIASLAAGLQVQRVAEAKDRERFNNAVAQAHAAVAARLQTYTAALRGGTGLFAARP GGAVTREEFRAYAERLDLPQVYPGIQGLGFSAKLPGLAGPETAAMLARHGVPGLEIHPSHPRPEVHAILFLEPLDRRNRA ALGYDMYSNAVRRAAMAAARDTGRGAMSGKVELVQEIDRDKQAGFLIYHPVYRDGGVPETVAQRRAQLIGFVYAPFRADD LLRGIFGDQPNPRVRMFVYDETVAPENLLHASTGRAPDPARFTASRDLEIGGRRWRIVYAAAPGLEEGSTRGLAFVFFVG GMLATGLVAFATWRQVRARLTAEDEIAARREAEHERELLVAELNHRVKNTLATVQSIAAQSLREGRSAAETRETFEARLL ALSHTHNLLTRAHWRGADLREIVRQELSPHGEGRVRIDGGPVSLPPAASLAVGMALHELATNAAKYGALSRPEGQVAVAW QVIGRAEARRVRLTWREIGGPPVAEAPRRRGFGTRLITQGLKQQLEGEVEMDFRSSGLVCVLEFPLRAPAEAA >Mature_553_residues MENSRLAAWLGLPRSLPVLVLVIGLIASLAAGLQVQRVAEAKDRERFNNAVAQAHAAVAARLQTYTAALRGGTGLFAARP GGAVTREEFRAYAERLDLPQVYPGIQGLGFSAKLPGLAGPETAAMLARHGVPGLEIHPSHPRPEVHAILFLEPLDRRNRA ALGYDMYSNAVRRAAMAAARDTGRGAMSGKVELVQEIDRDKQAGFLIYHPVYRDGGVPETVAQRRAQLIGFVYAPFRADD LLRGIFGDQPNPRVRMFVYDETVAPENLLHASTGRAPDPARFTASRDLEIGGRRWRIVYAAAPGLEEGSTRGLAFVFFVG GMLATGLVAFATWRQVRARLTAEDEIAARREAEHERELLVAELNHRVKNTLATVQSIAAQSLREGRSAAETRETFEARLL ALSHTHNLLTRAHWRGADLREIVRQELSPHGEGRVRIDGGPVSLPPAASLAVGMALHELATNAAKYGALSRPEGQVAVAW QVIGRAEARRVRLTWREIGGPPVAEAPRRRGFGTRLITQGLKQQLEGEVEMDFRSSGLVCVLEFPLRAPAEAA
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 60229; Mature: 60229
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: PS50839 CHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSRLAAWLGLPRSLPVLVLVIGLIASLAAGLQVQRVAEAKDRERFNNAVAQAHAAVAA CCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLQTYTAALRGGTGLFAARPGGAVTREEFRAYAERLDLPQVYPGIQGLGFSAKLPGLAGP HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC ETAAMLARHGVPGLEIHPSHPRPEVHAILFLEPLDRRNRAALGYDMYSNAVRRAAMAAAR HHHHHHHHCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHH DTGRGAMSGKVELVQEIDRDKQAGFLIYHPVYRDGGVPETVAQRRAQLIGFVYAPFRADD CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHEECCCCHHH LLRGIFGDQPNPRVRMFVYDETVAPENLLHASTGRAPDPARFTASRDLEIGGRRWRIVYA HHHHHHCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCEEEEEEE AAPGLEEGSTRGLAFVFFVGGMLATGLVAFATWRQVRARLTAEDEIAARREAEHERELLV ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AELNHRVKNTLATVQSIAAQSLREGRSAAETRETFEARLLALSHTHNLLTRAHWRGADLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH EIVRQELSPHGEGRVRIDGGPVSLPPAASLAVGMALHELATNAAKYGALSRPEGQVAVAW HHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEH QVIGRAEARRVRLTWREIGGPPVAEAPRRRGFGTRLITQGLKQQLEGEVEMDFRSSGLVC HHHCCHHHHEEEEEHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEE VLEFPLRAPAEAA EEECCCCCCCCCC >Mature Secondary Structure MENSRLAAWLGLPRSLPVLVLVIGLIASLAAGLQVQRVAEAKDRERFNNAVAQAHAAVAA CCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLQTYTAALRGGTGLFAARPGGAVTREEFRAYAERLDLPQVYPGIQGLGFSAKLPGLAGP HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC ETAAMLARHGVPGLEIHPSHPRPEVHAILFLEPLDRRNRAALGYDMYSNAVRRAAMAAAR HHHHHHHHCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHH DTGRGAMSGKVELVQEIDRDKQAGFLIYHPVYRDGGVPETVAQRRAQLIGFVYAPFRADD CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHEECCCCHHH LLRGIFGDQPNPRVRMFVYDETVAPENLLHASTGRAPDPARFTASRDLEIGGRRWRIVYA HHHHHHCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCEEEEEEE AAPGLEEGSTRGLAFVFFVGGMLATGLVAFATWRQVRARLTAEDEIAARREAEHERELLV ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AELNHRVKNTLATVQSIAAQSLREGRSAAETRETFEARLLALSHTHNLLTRAHWRGADLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH EIVRQELSPHGEGRVRIDGGPVSLPPAASLAVGMALHELATNAAKYGALSRPEGQVAVAW HHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEH QVIGRAEARRVRLTWREIGGPPVAEAPRRRGFGTRLITQGLKQQLEGEVEMDFRSSGLVC HHHCCHHHHEEEEEHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEE VLEFPLRAPAEAA EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA