| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197105700
Identifier: 197105700
GI number: 197105700
Start: 2532983
End: 2534137
Strand: Direct
Name: 197105700
Synonym: PHZ_c2238
Alternate gene names: NA
Gene position: 2532983-2534137 (Clockwise)
Preceding gene: 197105699
Following gene: 197105712
Centisome position: 63.38
GC content: 77.58
Gene sequence:
>1155_bases GTGCCCGCGGCCGCCGGCATCCGCACGTTCACCGTGGCCGCCCTCGCCGGCGGGCTGGGCCAGCTGGTCGGCGGCCCCGT TCTTACGGCGGTCATCGTCGCCGCCGTGGGCGCGTTCGTGGCCCTGGGCTACTGGCGCACGCGGCGGGAGGACGACCCCG GCCTGACCACCGAGATCGCCCTGGTCGTCACCGCGCTGCTGGGCGCCCTCGCCATCGCCGACCCCGCCCTGGCCGCGGGC GGCGGGGTGGCGGTGGCCGTCGTGCTCGCCGGCCGGACCCAGCTGCACCACTTCGTGGGCGAGGTGCTGACCGAGCGCGA GGTGCGCGGCGCCCTGGTCCTCGCCGCCGCGACGCTGATCGTCCTGCCGCTGCTGCCGGACCGGCCGATGGGGCCGTTCG ACGCGGTGAACCCCCGCTCGGTCTGGCTGCTGGTGATCCTCGTCCTGGCGATCGGCGCCGCGGGCCACGTCGCCGTCCGG GCGCTGGGTGTCCGCTTCGGCCTGCCGATGGCGGGCCTGGCGTCGGGGTTCGTATCCAGCGCGGCCACCATCGGGGCCAT GGGGGCCCGGGCGCGCACGACGCCCGAGCTGATGCCCGCCGCCGTCGCCGGCGCGGTGCTGTCCACCGTCGCGACCGTGA TGCAGATGACCCTGGTGGTGGCCGCCGTCAGCCTGCCGACGCTGCAGGCGCTCGCCCTGCCCCTCGCGCTCGCCGGCCTG ACCGCCGTGGCTTACGGGATCGTCTTCACCCTTGCCGGCCTGCGCCGCACGCCGGACGGGGAGCTCGATGCGGGCGAAGC GTTCAGCCTCGCCACGGCGCTGGTCTTCGGGGCCACGCTCACGGCGATCATGCTGGCGGCGGCGGCCCTGCAGGCCTGGT TCGGCGACCTCGGCGCCGCCGCGGCGGCGGCGCTGGCCGGTCTCGTCGACGCCCACGCCGCGGCGATCTCGGTGGCCGCC CTGGCGCGGAGCGGCCAGCTCGCCCCGGCAGACGCCGTGCTGCCGATCCTGGCCGGCTTCTCGACCAACGCGGCGACCAA GATCGTCCTGGCCGCCACGGCGGGCGGCCGCGCCTACGCCCTGCGGGTCGCGCCCGGGGTCGTGCTGGTGACGGGGGCGG CGTGGGCGGGCGCCCTCCTCTCCCGCGCCGCGTAA
Upstream 100 bases:
>100_bases AACGGGCATCTTCGGCGCCGGCGCACTGAACCTGCTGGTCGCGCTTGGCCTCGGCCTGCTGATCGGCGCCGAGCGCGAGC GCCGCAAGATCGAGAAGGCC
Downstream 100 bases:
>100_bases CGGCTCAGACCGGCCGGTCGATGGAGGCCGGGGGCTGGGAGAACCACTTCGGCCCCTGATCGGTCATGTAGAGGCAGTCC TCGATCCGGACGCCGAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MPAAAGIRTFTVAALAGGLGQLVGGPVLTAVIVAAVGAFVALGYWRTRREDDPGLTTEIALVVTALLGALAIADPALAAG GGVAVAVVLAGRTQLHHFVGEVLTEREVRGALVLAAATLIVLPLLPDRPMGPFDAVNPRSVWLLVILVLAIGAAGHVAVR ALGVRFGLPMAGLASGFVSSAATIGAMGARARTTPELMPAAVAGAVLSTVATVMQMTLVVAAVSLPTLQALALPLALAGL TAVAYGIVFTLAGLRRTPDGELDAGEAFSLATALVFGATLTAIMLAAAALQAWFGDLGAAAAAALAGLVDAHAAAISVAA LARSGQLAPADAVLPILAGFSTNAATKIVLAATAGGRAYALRVAPGVVLVTGAAWAGALLSRAA
Sequences:
>Translated_384_residues MPAAAGIRTFTVAALAGGLGQLVGGPVLTAVIVAAVGAFVALGYWRTRREDDPGLTTEIALVVTALLGALAIADPALAAG GGVAVAVVLAGRTQLHHFVGEVLTEREVRGALVLAAATLIVLPLLPDRPMGPFDAVNPRSVWLLVILVLAIGAAGHVAVR ALGVRFGLPMAGLASGFVSSAATIGAMGARARTTPELMPAAVAGAVLSTVATVMQMTLVVAAVSLPTLQALALPLALAGL TAVAYGIVFTLAGLRRTPDGELDAGEAFSLATALVFGATLTAIMLAAAALQAWFGDLGAAAAAALAGLVDAHAAAISVAA LARSGQLAPADAVLPILAGFSTNAATKIVLAATAGGRAYALRVAPGVVLVTGAAWAGALLSRAA >Mature_383_residues PAAAGIRTFTVAALAGGLGQLVGGPVLTAVIVAAVGAFVALGYWRTRREDDPGLTTEIALVVTALLGALAIADPALAAGG GVAVAVVLAGRTQLHHFVGEVLTEREVRGALVLAAATLIVLPLLPDRPMGPFDAVNPRSVWLLVILVLAIGAAGHVAVRA LGVRFGLPMAGLASGFVSSAATIGAMGARARTTPELMPAAVAGAVLSTVATVMQMTLVVAAVSLPTLQALALPLALAGLT AVAYGIVFTLAGLRRTPDGELDAGEAFSLATALVFGATLTAIMLAAAALQAWFGDLGAAAAAALAGLVDAHAAAISVAAL ARSGQLAPADAVLPILAGFSTNAATKIVLAATAGGRAYALRVAPGVVLVTGAAWAGALLSRAA
Specific function: Unknown
COG id: COG3174
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37685; Mature: 37554
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAAGIRTFTVAALAGGLGQLVGGPVLTAVIVAAVGAFVALGYWRTRREDDPGLTTEIA CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LVVTALLGALAIADPALAAGGGVAVAVVLAGRTQLHHFVGEVLTEREVRGALVLAAATLI HHHHHHHHHHHHCCCHHCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPLLPDRPMGPFDAVNPRSVWLLVILVLAIGAAGHVAVRALGVRFGLPMAGLASGFVSS HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH AATIGAMGARARTTPELMPAAVAGAVLSTVATVMQMTLVVAAVSLPTLQALALPLALAGL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVAYGIVFTLAGLRRTPDGELDAGEAFSLATALVFGATLTAIMLAAAALQAWFGDLGAA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAALAGLVDAHAAAISVAALARSGQLAPADAVLPILAGFSTNAATKIVLAATAGGRAYA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEE LRVAPGVVLVTGAAWAGALLSRAA EEECCCEEEEECHHHHHHHHHCCC >Mature Secondary Structure PAAAGIRTFTVAALAGGLGQLVGGPVLTAVIVAAVGAFVALGYWRTRREDDPGLTTEIA CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LVVTALLGALAIADPALAAGGGVAVAVVLAGRTQLHHFVGEVLTEREVRGALVLAAATLI HHHHHHHHHHHHCCCHHCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPLLPDRPMGPFDAVNPRSVWLLVILVLAIGAAGHVAVRALGVRFGLPMAGLASGFVSS HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH AATIGAMGARARTTPELMPAAVAGAVLSTVATVMQMTLVVAAVSLPTLQALALPLALAGL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVAYGIVFTLAGLRRTPDGELDAGEAFSLATALVFGATLTAIMLAAAALQAWFGDLGAA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAALAGLVDAHAAAISVAALARSGQLAPADAVLPILAGFSTNAATKIVLAATAGGRAYA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEE LRVAPGVVLVTGAAWAGALLSRAA EEECCCEEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA