| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105481
Identifier: 197105481
GI number: 197105481
Start: 2259757
End: 2260578
Strand: Reverse
Name: 197105481
Synonym: PHZ_c2018
Alternate gene names: NA
Gene position: 2260578-2259757 (Counterclockwise)
Preceding gene: 197105482
Following gene: 197105480
Centisome position: 56.57
GC content: 75.55
Gene sequence:
>822_bases TTGCCCGCCGGCCGCGTGAACTACCGCGAGCCGGCCGGCGATCCGGGCTTCTTCGGCCCGGACTCCATGGCCTGGAAGGT CCACGCCAATCCCGTCGCCCTGGCGGTGGGCGGCGTGGCCGCGGTCATCCTGGAGCTCGCCGAGCCGCGCGTGCGCACCG GGGTCTGGGAGCACTCGACCTTCCGCACCGATCCGCTGGCCCGCATGCAGCGGACCGGCGAGGCCACCATGATCACCACC TACGGCCCCACGCGCGCGGCCGAGGCGCGTGTGGCGATGGTGACCCGCATGCACGAGCGGGTGGGGGGCGTCACCCCCGA GGGCCAGGCCTATGTCGCCCTCGAGCCCGAGCTGATGACCTGGGTCCACCTGACCGCCGGCTGGGGCTTCCTGAACGCCT ACCGCCGCTACGTCGAGCCGCGCATGAGCCTCGCCGACCAGGACCGCTACTACGCCGAGGGCGGGCGCCTGGGCCGGGCG TTCGGCGCGCCCGAGCCGCCGGGCTCCGTGGCCGAGGTGGAGGCCTGGTTCGACCGCATGCGGCCCAAGCTCGTCCCGCA CCCGATCGTCGGCGAGTTCCTGGACATCGTCGCGACGACCTCGCCGCTGGGCCTGGCTGGCCGCGCGCTCCAGCCGCTGG TTGTGCAGGCGGCCATCGACCTCGTGCCGCCCGATCTGCGGGCCCGTCTCCAGTTGCCCGTCCGGCCGCTGCAGCTCGCC GCCGCCGGGCCCGTCCTGCGGGCGATGGCCGCCGCCGCGGCGCTCGCCCCCAATCCCATCGTCCGCGACGCTCACCAGCG GGTCGGCCGCGCCGCCGCCTGA
Upstream 100 bases:
>100_bases TGAAGCAGGCCTCGGTCCGGCTCGAGACCAGGTACTTCCCCGAAGGGAGCCTGCCCGCTTGAGCCTCGCCGCGGCCGCCG GGCGCCTCCAGGCGCGCGCC
Downstream 100 bases:
>100_bases CGTCCTCCTGAGGGCCCCTGCTAGGGGGTCCAGTTTCCGCTGTCTGGCCCTGGCGGAACACGCGCCTGCCAAGGATCGTA TCCCCTGCAGGCGCTTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPAGRVNYREPAGDPGFFGPDSMAWKVHANPVALAVGGVAAVILELAEPRVRTGVWEHSTFRTDPLARMQRTGEATMITT YGPTRAAEARVAMVTRMHERVGGVTPEGQAYVALEPELMTWVHLTAGWGFLNAYRRYVEPRMSLADQDRYYAEGGRLGRA FGAPEPPGSVAEVEAWFDRMRPKLVPHPIVGEFLDIVATTSPLGLAGRALQPLVVQAAIDLVPPDLRARLQLPVRPLQLA AAGPVLRAMAAAAALAPNPIVRDAHQRVGRAAA
Sequences:
>Translated_273_residues MPAGRVNYREPAGDPGFFGPDSMAWKVHANPVALAVGGVAAVILELAEPRVRTGVWEHSTFRTDPLARMQRTGEATMITT YGPTRAAEARVAMVTRMHERVGGVTPEGQAYVALEPELMTWVHLTAGWGFLNAYRRYVEPRMSLADQDRYYAEGGRLGRA FGAPEPPGSVAEVEAWFDRMRPKLVPHPIVGEFLDIVATTSPLGLAGRALQPLVVQAAIDLVPPDLRARLQLPVRPLQLA AAGPVLRAMAAAAALAPNPIVRDAHQRVGRAAA >Mature_272_residues PAGRVNYREPAGDPGFFGPDSMAWKVHANPVALAVGGVAAVILELAEPRVRTGVWEHSTFRTDPLARMQRTGEATMITTY GPTRAAEARVAMVTRMHERVGGVTPEGQAYVALEPELMTWVHLTAGWGFLNAYRRYVEPRMSLADQDRYYAEGGRLGRAF GAPEPPGSVAEVEAWFDRMRPKLVPHPIVGEFLDIVATTSPLGLAGRALQPLVVQAAIDLVPPDLRARLQLPVRPLQLAA AGPVLRAMAAAAALAPNPIVRDAHQRVGRAAA
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29443; Mature: 29312
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGRVNYREPAGDPGFFGPDSMAWKVHANPVALAVGGVAAVILELAEPRVRTGVWEHST CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCHHHHCCCCCCC FRTDPLARMQRTGEATMITTYGPTRAAEARVAMVTRMHERVGGVTPEGQAYVALEPELMT CCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHEE WVHLTAGWGFLNAYRRYVEPRMSLADQDRYYAEGGRLGRAFGAPEPPGSVAEVEAWFDRM EEEHHHCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC RPKLVPHPIVGEFLDIVATTSPLGLAGRALQPLVVQAAIDLVPPDLRARLQLPVRPLQLA CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHH AAGPVLRAMAAAAALAPNPIVRDAHQRVGRAAA HCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure PAGRVNYREPAGDPGFFGPDSMAWKVHANPVALAVGGVAAVILELAEPRVRTGVWEHST CCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCHHHHCCCCCCC FRTDPLARMQRTGEATMITTYGPTRAAEARVAMVTRMHERVGGVTPEGQAYVALEPELMT CCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHEE WVHLTAGWGFLNAYRRYVEPRMSLADQDRYYAEGGRLGRAFGAPEPPGSVAEVEAWFDRM EEEHHHCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC RPKLVPHPIVGEFLDIVATTSPLGLAGRALQPLVVQAAIDLVPPDLRARLQLPVRPLQLA CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHH AAGPVLRAMAAAAALAPNPIVRDAHQRVGRAAA HCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA