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The map label for this gene is ybbI [C]

Identifier: 197105482

GI number: 197105482

Start: 2260617

End: 2261027

Strand: Reverse

Name: ybbI [C]

Synonym: PHZ_c2019

Alternate gene names: 197105482

Gene position: 2261027-2260617 (Counterclockwise)

Preceding gene: 197105483

Following gene: 197105481

Centisome position: 56.58

GC content: 69.34

Gene sequence:

>411_bases
ATGTCGCTCAACCTGCGCCGGCCGCCTTACCGGACCTATTCCATCACCCAGCTGTGCCACGAGTTCGGGGCCACGCCCCG
GGCGCTGCGGTTCTACGAGGAACAGGGCCTGCTGTTCCCCGCCCGCCGCGAGATGCAGCGGGTCTATTCCTACAAGGACC
GCGCCCGCCTCGCGCTCATCATGCGCGGCCGCCGGGTCGGCCTGTCGGTGGCCGAGATCCGCGACATCCTCGACCTCTAC
GAGGAGGGCGGCGAGACCGCCCAGAACGCCCACGCCATCCGTGTCTTCCAGAAGCGCATCGACGAGCTGCTGGCCCAGCG
CGAGGCCGTGGACGAGGCCATCGAGGCCCTGAAGCAGGCCTCGGTCCGGCTCGAGACCAGGTACTTCCCCGAAGGGAGCC
TGCCCGCTTGA

Upstream 100 bases:

>100_bases
ACCTGAACAACCGGGCCGCCTCGATCTACGGCGGCTCCAACGAGATCCAAAGAGACATCATCGCCCGGCTCGTGCTCGGG
CTTTGAAGGGAGGAAATGCG

Downstream 100 bases:

>100_bases
GCCTCGCCGCGGCCGCCGGGCGCCTCCAGGCGCGCGCCTTGCCCGCCGGCCGCGTGAACTACCGCGAGCCGGCCGGCGAT
CCGGGCTTCTTCGGCCCGGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Regulatory Protein; MerR Family Regulatory Family; Transcription Regulator Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSLNLRRPPYRTYSITQLCHEFGATPRALRFYEEQGLLFPARREMQRVYSYKDRARLALIMRGRRVGLSVAEIRDILDLY
EEGGETAQNAHAIRVFQKRIDELLAQREAVDEAIEALKQASVRLETRYFPEGSLPA

Sequences:

>Translated_136_residues
MSLNLRRPPYRTYSITQLCHEFGATPRALRFYEEQGLLFPARREMQRVYSYKDRARLALIMRGRRVGLSVAEIRDILDLY
EEGGETAQNAHAIRVFQKRIDELLAQREAVDEAIEALKQASVRLETRYFPEGSLPA
>Mature_135_residues
SLNLRRPPYRTYSITQLCHEFGATPRALRFYEEQGLLFPARREMQRVYSYKDRARLALIMRGRRVGLSVAEIRDILDLYE
EGGETAQNAHAIRVFQKRIDELLAQREAVDEAIEALKQASVRLETRYFPEGSLPA

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15801; Mature: 15670

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNLRRPPYRTYSITQLCHEFGATPRALRFYEEQGLLFPARREMQRVYSYKDRARLALI
CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MRGRRVGLSVAEIRDILDLYEEGGETAQNAHAIRVFQKRIDELLAQREAVDEAIEALKQA
HHCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRLETRYFPEGSLPA
HHHHHHEECCCCCCCC
>Mature Secondary Structure 
SLNLRRPPYRTYSITQLCHEFGATPRALRFYEEQGLLFPARREMQRVYSYKDRARLALI
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MRGRRVGLSVAEIRDILDLYEEGGETAQNAHAIRVFQKRIDELLAQREAVDEAIEALKQA
HHCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRLETRYFPEGSLPA
HHHHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA