| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ilvE [H]
Identifier: 197105480
GI number: 197105480
Start: 2258519
End: 2259616
Strand: Reverse
Name: ilvE [H]
Synonym: PHZ_c2017
Alternate gene names: 197105480
Gene position: 2259616-2258519 (Counterclockwise)
Preceding gene: 197105481
Following gene: 197105478
Centisome position: 56.54
GC content: 71.68
Gene sequence:
>1098_bases ATGGAAGACTCGCTTCTCATCACCCGTCGCCCCCATGCCTCGCCGACCCCGCCGCACGCGCGGGCGGCCCTCCTGGAAGA TCCCGGCTTCGGCAAGATCTTCACGGACCACATGGTGACGGTGCGCTGGGTAGAGGGGAAAGGCTGGCATGACGCCCAGG TGCGCGCCCGCGAGCCGTTCCAGCTCGATCCCGCCGCGGCGGTGCTGCACTACGCCCAGGAGATCTTCGAGGGCCTGAAG GCCTACCGCACCCGCGGCAACGACGTGGTGCTCTTCCGCCCGCGCGAGAACGCCCGCCGCTTCGTCGCCTCGGCCGACCG CATGGCCATGCCGAAGCTGCCCGAGGACCTGTTCGTCGGCGCCATCGAGGCGCTGGTCCGCGTCGACGCCGACTGGATCC CCACGGGGGAGGGCAGCCTCTATCTGCGGCCCTTCATGATCGCCACCGAGGCCTTCCTCGGCGTCCGGCCGGCGGCCGAA TACACCTTCTGCGTCATCGCCTGTCCGGTGGGCGCCTACTTCAAGGGCGGGGCCAAGCCGGTCACCGTCTGGGTGTCCGA CGCCTACACCCGCGCCGCGCCCGGCGGCACCGGGGCGGCCAAGTGCGGCGGCAACTACGCCGCCAGCCTGGTGGCCCAGG CCGAGGCCATCCGCAACGGCTGCGACCAGGTCGTCTTCCTCGACGCGGCCGAGCACCGCTACGTCGAGGAGCTGGGCGGC ATGAACGTCTTCTTCGTCTTCGACGACGGGACCATGGTCACCCCGCCGCTGGGCGGCACCATCCTGCCCGGCATCACCCG CGACGCGATCCTGACCCTGGCCCGCGACGAGGGCCTGAACGTCCAGGAGCGGCTCTACTCGTTCGACGAGTGGCAGGCCG ACGCGGCCAGCGGGCGGCTGAAGGAGGCCTTCGCCTGCGGCACCGCCGCGGTGCTGGCGGCCATCGGCGAGATCCGCCAC GTGGGCGGCGCCTTCAAGATCGGCGGCGGCCAGGAGGGCCCGGTGACGACGCGGCTGCGCGACCAGCTCACCGGCATCCA GCGCTGCACGGCGCCCGACCCGCACGGCTGGGTGCACAAGATCGACATGGAAGCCTGA
Upstream 100 bases:
>100_bases TGTCTGGCCCTGGCGGAACACGCGCCTGCCAAGGATCGTATCCCCTGCAGGCGCTTGAGCATTGTGCTCCCGAGCGTTTT CCAATTAGAAAATCGCCGTC
Downstream 100 bases:
>100_bases GGGAAGCCTGAGCAGCCCCCGCCGCCCCTCAGCGGGCGGCGGCCTTTGCGGGAGCCGGGGCCTCGTCCCCGTGCAGGGTC ATCAGCGATTCCATCAGGTC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MEDSLLITRRPHASPTPPHARAALLEDPGFGKIFTDHMVTVRWVEGKGWHDAQVRAREPFQLDPAAAVLHYAQEIFEGLK AYRTRGNDVVLFRPRENARRFVASADRMAMPKLPEDLFVGAIEALVRVDADWIPTGEGSLYLRPFMIATEAFLGVRPAAE YTFCVIACPVGAYFKGGAKPVTVWVSDAYTRAAPGGTGAAKCGGNYAASLVAQAEAIRNGCDQVVFLDAAEHRYVEELGG MNVFFVFDDGTMVTPPLGGTILPGITRDAILTLARDEGLNVQERLYSFDEWQADAASGRLKEAFACGTAAVLAAIGEIRH VGGAFKIGGGQEGPVTTRLRDQLTGIQRCTAPDPHGWVHKIDMEA
Sequences:
>Translated_365_residues MEDSLLITRRPHASPTPPHARAALLEDPGFGKIFTDHMVTVRWVEGKGWHDAQVRAREPFQLDPAAAVLHYAQEIFEGLK AYRTRGNDVVLFRPRENARRFVASADRMAMPKLPEDLFVGAIEALVRVDADWIPTGEGSLYLRPFMIATEAFLGVRPAAE YTFCVIACPVGAYFKGGAKPVTVWVSDAYTRAAPGGTGAAKCGGNYAASLVAQAEAIRNGCDQVVFLDAAEHRYVEELGG MNVFFVFDDGTMVTPPLGGTILPGITRDAILTLARDEGLNVQERLYSFDEWQADAASGRLKEAFACGTAAVLAAIGEIRH VGGAFKIGGGQEGPVTTRLRDQLTGIQRCTAPDPHGWVHKIDMEA >Mature_365_residues MEDSLLITRRPHASPTPPHARAALLEDPGFGKIFTDHMVTVRWVEGKGWHDAQVRAREPFQLDPAAAVLHYAQEIFEGLK AYRTRGNDVVLFRPRENARRFVASADRMAMPKLPEDLFVGAIEALVRVDADWIPTGEGSLYLRPFMIATEAFLGVRPAAE YTFCVIACPVGAYFKGGAKPVTVWVSDAYTRAAPGGTGAAKCGGNYAASLVAQAEAIRNGCDQVVFLDAAEHRYVEELGG MNVFFVFDDGTMVTPPLGGTILPGITRDAILTLARDEGLNVQERLYSFDEWQADAASGRLKEAFACGTAAVLAAIGEIRH VGGAFKIGGGQEGPVTTRLRDQLTGIQRCTAPDPHGWVHKIDMEA
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010906, Length=326, Percent_Identity=40.4907975460123, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI38176287, Length=326, Percent_Identity=40.4907975460123, Blast_Score=247, Evalue=9e-66, Organism=Homo sapiens, GI296010904, Length=326, Percent_Identity=40.4907975460123, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI50658084, Length=352, Percent_Identity=37.5, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI296010902, Length=326, Percent_Identity=35.5828220858896, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI296010900, Length=326, Percent_Identity=35.5828220858896, Blast_Score=201, Evalue=6e-52, Organism=Homo sapiens, GI258614015, Length=282, Percent_Identity=37.5886524822695, Blast_Score=186, Evalue=4e-47, Organism=Escherichia coli, GI48994963, Length=321, Percent_Identity=34.2679127725857, Blast_Score=139, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17568601, Length=298, Percent_Identity=39.261744966443, Blast_Score=217, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17565728, Length=333, Percent_Identity=33.9339339339339, Blast_Score=181, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6322608, Length=354, Percent_Identity=39.8305084745763, Blast_Score=243, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6322002, Length=326, Percent_Identity=42.3312883435583, Blast_Score=241, Evalue=1e-64, Organism=Drosophila melanogaster, GI24641779, Length=346, Percent_Identity=39.0173410404624, Blast_Score=221, Evalue=4e-58,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39555; Mature: 39555
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDSLLITRRPHASPTPPHARAALLEDPGFGKIFTDHMVTVRWVEGKGWHDAQVRAREPF CCCCEEEEECCCCCCCCCCHHEEEECCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCC QLDPAAAVLHYAQEIFEGLKAYRTRGNDVVLFRPRENARRFVASADRMAMPKLPEDLFVG CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHCCCCCCHHHHHH AIEALVRVDADWIPTGEGSLYLRPFMIATEAFLGVRPAAEYTFCVIACPVGAYFKGGAKP HHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHCCCCCE VTVWVSDAYTRAAPGGTGAAKCGGNYAASLVAQAEAIRNGCDQVVFLDAAEHRYVEELGG EEEEEECCCHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCC MNVFFVFDDGTMVTPPLGGTILPGITRDAILTLARDEGLNVQERLYSFDEWQADAASGRL CEEEEEECCCCEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHCCHHHCCHHHCCHH KEAFACGTAAVLAAIGEIRHVGGAFKIGGGQEGPVTTRLRDQLTGIQRCTAPDPHGWVHK HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE IDMEA EECCC >Mature Secondary Structure MEDSLLITRRPHASPTPPHARAALLEDPGFGKIFTDHMVTVRWVEGKGWHDAQVRAREPF CCCCEEEEECCCCCCCCCCHHEEEECCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCC QLDPAAAVLHYAQEIFEGLKAYRTRGNDVVLFRPRENARRFVASADRMAMPKLPEDLFVG CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHCCCCCCHHHHHH AIEALVRVDADWIPTGEGSLYLRPFMIATEAFLGVRPAAEYTFCVIACPVGAYFKGGAKP HHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHCCCCCE VTVWVSDAYTRAAPGGTGAAKCGGNYAASLVAQAEAIRNGCDQVVFLDAAEHRYVEELGG EEEEEECCCHHCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCC MNVFFVFDDGTMVTPPLGGTILPGITRDAILTLARDEGLNVQERLYSFDEWQADAASGRL CEEEEEECCCCEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHCCHHHCCHHHCCHH KEAFACGTAAVLAAIGEIRHVGGAFKIGGGQEGPVTTRLRDQLTGIQRCTAPDPHGWVHK HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE IDMEA EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]