| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105287
Identifier: 197105287
GI number: 197105287
Start: 2042325
End: 2042735
Strand: Direct
Name: 197105287
Synonym: PHZ_c1824
Alternate gene names: NA
Gene position: 2042325-2042735 (Clockwise)
Preceding gene: 197105285
Following gene: 197105289
Centisome position: 51.11
GC content: 71.53
Gene sequence:
>411_bases ATGAGCTACGACCGAACCCTCCTCGGCGACGGCCGCTATCCCGACACCGGCCCCCTCGCCGTCCTGGCGCGGCTGGCCTT CCTGGGCGCCGTCGTCGCAATCGTGGTGGCGGTGTTCCTCCCCCCGTGGATGGTGCCGGACTTCGTGAAGTCCACCTACC TGCAGCACTTCGCGGCGTTCTATTGCGCCGCCCTGGCGGGACTGGCCGCGATGCCGCGCCGGCGCCTGCGCAGCATCGCC GTCGGCTTCTTCGTGTTCGCCACGGTGCTGGAAGCCTCGCACCTGCTGTCGGGCGCAAGGTTTGCGGCGCTGGTGGACAA CTGGGTGGCCGACCTCGGCGGCCTCGCGGCCGCCTTCGCGCCGATCATCGTCGAGCGGTTCCGCCGGCGCTTCGCGCGCG TGGACCGCTAG
Upstream 100 bases:
>100_bases TGGGGAATGGTGACGACGACGGGCTTGCTCATGCCCTCTCAACGGCCGAGGCGCGCATGGGGGTTCCGGAGACCCTCGGC CCGCCTTAGGGTCCCGCCCG
Downstream 100 bases:
>100_bases ACGCGGAGCGCTAGAGGAACGTCCACCCGCGGTCCCGCTCGCGGACCCGCAGGTTGTTCTGCACGTTGCGGACGCCCTCG ATGTCGGCGACGTCCTCGAT
Product: VanZ like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAFYCAALAGLAAMPRRRLRSIA VGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFAPIIVERFRRRFARVDR
Sequences:
>Translated_136_residues MSYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAFYCAALAGLAAMPRRRLRSIA VGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFAPIIVERFRRRFARVDR >Mature_135_residues SYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAFYCAALAGLAAMPRRRLRSIAV GFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFAPIIVERFRRRFARVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14875; Mature: 14743
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YCAALAGLAAMPRRRLRSIAVGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIIVERFRRRFARVDR HHHHHHHHHHHHHCCC >Mature Secondary Structure SYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YCAALAGLAAMPRRRLRSIAVGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIIVERFRRRFARVDR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA