Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197105287

Identifier: 197105287

GI number: 197105287

Start: 2042325

End: 2042735

Strand: Direct

Name: 197105287

Synonym: PHZ_c1824

Alternate gene names: NA

Gene position: 2042325-2042735 (Clockwise)

Preceding gene: 197105285

Following gene: 197105289

Centisome position: 51.11

GC content: 71.53

Gene sequence:

>411_bases
ATGAGCTACGACCGAACCCTCCTCGGCGACGGCCGCTATCCCGACACCGGCCCCCTCGCCGTCCTGGCGCGGCTGGCCTT
CCTGGGCGCCGTCGTCGCAATCGTGGTGGCGGTGTTCCTCCCCCCGTGGATGGTGCCGGACTTCGTGAAGTCCACCTACC
TGCAGCACTTCGCGGCGTTCTATTGCGCCGCCCTGGCGGGACTGGCCGCGATGCCGCGCCGGCGCCTGCGCAGCATCGCC
GTCGGCTTCTTCGTGTTCGCCACGGTGCTGGAAGCCTCGCACCTGCTGTCGGGCGCAAGGTTTGCGGCGCTGGTGGACAA
CTGGGTGGCCGACCTCGGCGGCCTCGCGGCCGCCTTCGCGCCGATCATCGTCGAGCGGTTCCGCCGGCGCTTCGCGCGCG
TGGACCGCTAG

Upstream 100 bases:

>100_bases
TGGGGAATGGTGACGACGACGGGCTTGCTCATGCCCTCTCAACGGCCGAGGCGCGCATGGGGGTTCCGGAGACCCTCGGC
CCGCCTTAGGGTCCCGCCCG

Downstream 100 bases:

>100_bases
ACGCGGAGCGCTAGAGGAACGTCCACCCGCGGTCCCGCTCGCGGACCCGCAGGTTGTTCTGCACGTTGCGGACGCCCTCG
ATGTCGGCGACGTCCTCGAT

Product: VanZ like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAFYCAALAGLAAMPRRRLRSIA
VGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFAPIIVERFRRRFARVDR

Sequences:

>Translated_136_residues
MSYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAFYCAALAGLAAMPRRRLRSIA
VGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFAPIIVERFRRRFARVDR
>Mature_135_residues
SYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAFYCAALAGLAAMPRRRLRSIAV
GFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFAPIIVERFRRRFARVDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14875; Mature: 14743

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YCAALAGLAAMPRRRLRSIAVGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIVERFRRRFARVDR
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYDRTLLGDGRYPDTGPLAVLARLAFLGAVVAIVVAVFLPPWMVPDFVKSTYLQHFAAF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YCAALAGLAAMPRRRLRSIAVGFFVFATVLEASHLLSGARFAALVDNWVADLGGLAAAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIVERFRRRFARVDR
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA