Click here to switch to the map view.

The map label for this gene is ybhN [C]

Identifier: 197105289

GI number: 197105289

Start: 2043479

End: 2044537

Strand: Direct

Name: ybhN [C]

Synonym: PHZ_c1826

Alternate gene names: 197105289

Gene position: 2043479-2044537 (Clockwise)

Preceding gene: 197105287

Following gene: 197105290

Centisome position: 51.13

GC content: 72.43

Gene sequence:

>1059_bases
GTGAGTGACCGTGGGGGCCGACTCAAGGGACATGTGATCGCCGTGCAGAGCCATGACCCCACCGAGCTCCCCCTTCACGG
CCCGGAGGACGTGGAAGAGGAGCTGGCCGCCGTCCTGCCCGAGACGCAGGGGAACCGCTTCTTTCCCCTCATCCGGCGAT
GGGCGCTGCACGTCGTCCCGTTCCTGCTCCTGGCCGCCGCCGTCTTCGTCCTTTGGCGCGAGTTCCACGAGGTCCGGCCC
GCCGACATCGCCGCCTCGATGCGGGCGTGGGGCTATGGCGACACGCTGGCGGCGCTGGGCCTTTCGGCCGCCAGCTTCAC
CCTCATGGGCCTCGTGGAGTGGCTGGGCCTGCGCTGGGCCGGCGCGCGGCTGCCGATCCCTCCGGCCCTGGCCGGCTCGT
TCCTCGCCAACGCCATCGGCCACACCCTGGGCGCCAACCTGATCGTCTCGGGCGCCATCCGGGCCAGGTTCTACAGCCGC
TACGGCGTCAATCTCAGGCAGGTGGCGGCGACCACCGTCTTCCACGGCGCCTCCTTCGCCGTCGGCCTCTCGGCCCTGGC
CGGGGCGAGCCTGCTGATCGGCGGCGGCAGCCCCTCGGTCCGCATCGCCGGGCCGGTGGCCAGCGGCATGGGCGTCCTGC
TGCTCGGCGGAGTGGCCTTCTACGTCGCGCTCTGCGGAACCCTGAAGCAGCCGCTGCGGGGCTTCGGCCACAGCCTGAAG
CTGCCCTCCTGGCGGGTCGCCCTGGCGCAGATCGGGCTGGGCGCCTGCGACAACGCGGTGGCGGCGGGGATCATCTGGAG
CCTGCTGCCCGAGGGCTCGGTCGAGTACTTCACCTTCGTGGGCGCCTACGCCCCCTCGGTGGTCGTGGGCCTGATCTCCC
ACGTCCCGGGCGGCGTGGGGGTGTTCGAGGGATCGCTGTCGACGCTGCTCGCGGGCGTGCCCGCCGCGCCCCTGGCGGCG
GCGTTCCTCGGCTATCGCCTAGCCTTCTTCCTCATACCGCTGCTCATCGCCGGGCTGGCGCTGATGGCCGACGCCATGCG
CCAGCGGGGCCACAGCTAG

Upstream 100 bases:

>100_bases
GCGGTCTCCGGCGGGCCAGTCTTCGTGGGCCATGGTCGCCTCCGTCAACGTTTGTCCGAAGTCACGGCAAGAACCTTCGC
CCTAGTGTTCGGTTCCGCCC

Downstream 100 bases:

>100_bases
CGGCGGGCGGTCTTGCGGCGGGGCGGGCGTCCGCGGTTGAGTTCGACACCGATCACCGCCTTGCGCAGCGCCTCGAACAG
GTCCGCCAGGGAATCCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSDRGGRLKGHVIAVQSHDPTELPLHGPEDVEEELAAVLPETQGNRFFPLIRRWALHVVPFLLLAAAVFVLWREFHEVRP
ADIAASMRAWGYGDTLAALGLSAASFTLMGLVEWLGLRWAGARLPIPPALAGSFLANAIGHTLGANLIVSGAIRARFYSR
YGVNLRQVAATTVFHGASFAVGLSALAGASLLIGGGSPSVRIAGPVASGMGVLLLGGVAFYVALCGTLKQPLRGFGHSLK
LPSWRVALAQIGLGACDNAVAAGIIWSLLPEGSVEYFTFVGAYAPSVVVGLISHVPGGVGVFEGSLSTLLAGVPAAPLAA
AFLGYRLAFFLIPLLIAGLALMADAMRQRGHS

Sequences:

>Translated_352_residues
MSDRGGRLKGHVIAVQSHDPTELPLHGPEDVEEELAAVLPETQGNRFFPLIRRWALHVVPFLLLAAAVFVLWREFHEVRP
ADIAASMRAWGYGDTLAALGLSAASFTLMGLVEWLGLRWAGARLPIPPALAGSFLANAIGHTLGANLIVSGAIRARFYSR
YGVNLRQVAATTVFHGASFAVGLSALAGASLLIGGGSPSVRIAGPVASGMGVLLLGGVAFYVALCGTLKQPLRGFGHSLK
LPSWRVALAQIGLGACDNAVAAGIIWSLLPEGSVEYFTFVGAYAPSVVVGLISHVPGGVGVFEGSLSTLLAGVPAAPLAA
AFLGYRLAFFLIPLLIAGLALMADAMRQRGHS
>Mature_351_residues
SDRGGRLKGHVIAVQSHDPTELPLHGPEDVEEELAAVLPETQGNRFFPLIRRWALHVVPFLLLAAAVFVLWREFHEVRPA
DIAASMRAWGYGDTLAALGLSAASFTLMGLVEWLGLRWAGARLPIPPALAGSFLANAIGHTLGANLIVSGAIRARFYSRY
GVNLRQVAATTVFHGASFAVGLSALAGASLLIGGGSPSVRIAGPVASGMGVLLLGGVAFYVALCGTLKQPLRGFGHSLKL
PSWRVALAQIGLGACDNAVAAGIIWSLLPEGSVEYFTFVGAYAPSVVVGLISHVPGGVGVFEGSLSTLLAGVPAAPLAAA
FLGYRLAFFLIPLLIAGLALMADAMRQRGHS

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhN [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=296, Percent_Identity=29.3918918918919, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 36640; Mature: 36509

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRGGRLKGHVIAVQSHDPTELPLHGPEDVEEELAAVLPETQGNRFFPLIRRWALHVVP
CCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
FLLLAAAVFVLWREFHEVRPADIAASMRAWGYGDTLAALGLSAASFTLMGLVEWLGLRWA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GARLPIPPALAGSFLANAIGHTLGANLIVSGAIRARFYSRYGVNLRQVAATTVFHGASFA
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
VGLSALAGASLLIGGGSPSVRIAGPVASGMGVLLLGGVAFYVALCGTLKQPLRGFGHSLK
HHHHHHCCCEEEEECCCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPSWRVALAQIGLGACDNAVAAGIIWSLLPEGSVEYFTFVGAYAPSVVVGLISHVPGGVG
CCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VFEGSLSTLLAGVPAAPLAAAFLGYRLAFFLIPLLIAGLALMADAMRQRGHS
EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDRGGRLKGHVIAVQSHDPTELPLHGPEDVEEELAAVLPETQGNRFFPLIRRWALHVVP
CCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
FLLLAAAVFVLWREFHEVRPADIAASMRAWGYGDTLAALGLSAASFTLMGLVEWLGLRWA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GARLPIPPALAGSFLANAIGHTLGANLIVSGAIRARFYSRYGVNLRQVAATTVFHGASFA
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
VGLSALAGASLLIGGGSPSVRIAGPVASGMGVLLLGGVAFYVALCGTLKQPLRGFGHSLK
HHHHHHCCCEEEEECCCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPSWRVALAQIGLGACDNAVAAGIIWSLLPEGSVEYFTFVGAYAPSVVVGLISHVPGGVG
CCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VFEGSLSTLLAGVPAAPLAAAFLGYRLAFFLIPLLIAGLALMADAMRQRGHS
EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]