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The map label for this gene is nuoC

Identifier: 197105266

GI number: 197105266

Start: 2018162

End: 2018791

Strand: Reverse

Name: nuoC

Synonym: PHZ_c1803

Alternate gene names: 197105266

Gene position: 2018791-2018162 (Counterclockwise)

Preceding gene: 197105267

Following gene: 197105265

Centisome position: 50.52

GC content: 68.25

Gene sequence:

>630_bases
ATGAGCTGGCCCGCGACCCATGACGAGCTCGAGGCCCTGGGGCGTGAGCTGGTGGCCGGCGGCCTCGGCCCGTTCGGCGG
CTACGAGGTGGCGTTCGGCGAGCTGTCGCTCACCGGCCCGGCCCACCGCATCGTCGAAGGCCTGACCCTGCTGCGCGACG
ATCACGGGTTCCAGCAGCTCGTGGACATCTGCGGCGTGGACTATCCCGAGCGCGAGCGGCGCTTCGACGTGGTCTACCAC
CTGCTGTCGTTCACGAAGAACCGGCGCATCCGCGTGAAGGTGCAGGCCGACGAGGACACCGCCGTCCCGTCGGTGACGGG
CGTCTATCCCAACGCCGACTGGTACGAGCGCGAGGCGTTCGACATGTACGGCGTCTTCTTCGACGGCCACCCCGACCTGC
GGCGGATCCTCACCGACTACGGCTTCCACGGCCATCCGCTGCGGAAGGACTTCCCGATGACCGGCTATGTCGAGGTCCGC
TACGACGACGAGCTGAAGCGGGTCGTCTACGAGCCGGTGAAGTCGGTGGAGTGGCGCAACTGGGACTTCCTCTCGCCGTG
GGAAGGGGTGGAGCGCGGCTTCGCGCCGATCCTGCCCGGCGACGAGAAGGGTGAGGAGGCCAAGTCTTGA

Upstream 100 bases:

>100_bases
TGGACGTCTACGTCCCGGGCTGCCCGCCGACCGCCGAGGCCCTGGTCTACGGCGTGCTGCAGCTTCAGAAGAAGATCCGC
CGCACCGGGACGATCGTCCG

Downstream 100 bases:

>100_bases
CCGGCCAGACCGCGCCTGCGGCGCCCGAGGACGCGAACGTCCTGGGCCTGCCCGAGACCAAGGTCCGCAAGTTCAACATC
AACTTCGGCCCGCAGCACCC

Product: NADH dehydrogenase I, C subunit

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSWPATHDELEALGRELVAGGLGPFGGYEVAFGELSLTGPAHRIVEGLTLLRDDHGFQQLVDICGVDYPERERRFDVVYH
LLSFTKNRRIRVKVQADEDTAVPSVTGVYPNADWYEREAFDMYGVFFDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVR
YDDELKRVVYEPVKSVEWRNWDFLSPWEGVERGFAPILPGDEKGEEAKS

Sequences:

>Translated_209_residues
MSWPATHDELEALGRELVAGGLGPFGGYEVAFGELSLTGPAHRIVEGLTLLRDDHGFQQLVDICGVDYPERERRFDVVYH
LLSFTKNRRIRVKVQADEDTAVPSVTGVYPNADWYEREAFDMYGVFFDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVR
YDDELKRVVYEPVKSVEWRNWDFLSPWEGVERGFAPILPGDEKGEEAKS
>Mature_208_residues
SWPATHDELEALGRELVAGGLGPFGGYEVAFGELSLTGPAHRIVEGLTLLRDDHGFQQLVDICGVDYPERERRFDVVYHL
LSFTKNRRIRVKVQADEDTAVPSVTGVYPNADWYEREAFDMYGVFFDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRY
DDELKRVVYEPVKSVEWRNWDFLSPWEGVERGFAPILPGDEKGEEAKS

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family

Homologues:

Organism=Homo sapiens, GI4758788, Length=189, Percent_Identity=52.3809523809524, Blast_Score=183, Evalue=1e-46,
Organism=Escherichia coli, GI145693162, Length=131, Percent_Identity=39.6946564885496, Blast_Score=100, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71990788, Length=158, Percent_Identity=51.8987341772152, Blast_Score=165, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI32563621, Length=158, Percent_Identity=51.8987341772152, Blast_Score=164, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24656494, Length=148, Percent_Identity=59.4594594594595, Blast_Score=175, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUOC_PHEZH (B4RCM7)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002130643.1
- GeneID:   6791316
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c1803
- HOGENOM:   HBG727675
- OMA:   VVYEPVR
- GO:   GO:0006810
- HAMAP:   MF_01357
- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581
- TIGRFAMs:   TIGR01961

Pfam domain/function: PF00329 Complex1_30kDa

EC number: =1.6.99.5

Molecular weight: Translated: 23983; Mature: 23852

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00542 COMPLEX1_30K

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWPATHDELEALGRELVAGGLGPFGGYEVAFGELSLTGPAHRIVEGLTLLRDDHGFQQL
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCHHHH
VDICGVDYPERERRFDVVYHLLSFTKNRRIRVKVQADEDTAVPSVTGVYPNADWYEREAF
HHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCCCCCCCHHHHHH
DMYGVFFDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRYDDELKRVVYEPVKSVEWRN
HEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCC
WDFLSPWEGVERGFAPILPGDEKGEEAKS
CCCCCCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWPATHDELEALGRELVAGGLGPFGGYEVAFGELSLTGPAHRIVEGLTLLRDDHGFQQL
CCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCHHHH
VDICGVDYPERERRFDVVYHLLSFTKNRRIRVKVQADEDTAVPSVTGVYPNADWYEREAF
HHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCCCCCCCHHHHHH
DMYGVFFDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRYDDELKRVVYEPVKSVEWRN
HEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCC
WDFLSPWEGVERGFAPILPGDEKGEEAKS
CCCCCCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA