| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105119
Identifier: 197105119
GI number: 197105119
Start: 1863180
End: 1864460
Strand: Reverse
Name: 197105119
Synonym: PHZ_c1656
Alternate gene names: NA
Gene position: 1864460-1863180 (Counterclockwise)
Preceding gene: 197105120
Following gene: 197105117
Centisome position: 46.66
GC content: 67.84
Gene sequence:
>1281_bases ATGGCATTCAACCCGCTCAACGAGCGCGGCATTCCGCTCGAACGTCAGCTTCGCAACTGGTCCGAGCTGAACGTCCAGCC CTACGACACCCGCGACGTCCACCCCTACACCCGCTGCCGGGTCATCCTGATGAACGGCGTCGAGGTCGAGGCGGCGATGT TCTCGCACAACTTCAACCGCAACCTCGCCGACGTGGAGATGAAGCAGCGGCTGCAGCGCGTGCGCCGCGTCGAGCAGCAG CAGCAGAAGGCGGTGAACTGGCTGATCCCCGGCGAGAAGCAGGAGAACGCCATCGAGGTGACCATCGGCTATGAGCAGGT GGCGGTGGACCTGACCGCCTGGCTCGCCCGCCATGAGCCCGACCCCTACCTGAAGCAGGTCTACGAGTTCGGCCTGCTGG AGGACTTCGACCACCTCTACCGCTACGCCAACCTCATGGACCTGATGGGCAACGGCCGCCGGGCCGAGGAGATCACCGGC GACTACACCGAGATCACGCCCGGCCGCCCGACCATCTTCGAGCACCGCGACCCGCGCGACGACATCCGCCGGCCGATGAC GGTCCAGGCGGCCCACCGGCAGTCGATCCTGAACGCCATGACGCTGGTCTCTGCCGAGCAGCAGACGATGAACTACTACA TGACCGTCGGGAACCGGCCCACCGACCCCCTGGCCCGCGCGCTCTACCTGGAGATCGCCCAGATCGAGGAGCAGCACGTC AGCCACTACGAGTCCTGCCTCGACCCCACGGTGAGCTGGCTGACCAACTGGGTGCTGCACGAGAACCACGAGTGCTGGCT CTACTGGTCCTGCTTCGAGACCGAGGTCGACCCGCGCATCAAGGCGCTGTGGGAGCTGCACCTGTCCATGGAGATCGAGC ACCTGCGGATCGCCGCCCGGGCGCTGGAGGAGGTCGAGGGCAAGGACGCCGCCGAGCTGATCGGGGCCGGCTACGAGGCG CCCATGACTTTCGAGGAGAACAAGGCCTATCTGCGCGAAGTCGTCTCGCGGCAGGTCGACCTGACCGCCTGGGACTCCGA ATTCCTTCCGGTCGAGGAGCTGCCCGAGGGGCACCGCTACTTCGCCTACCAGGCCCAGGTGAACGCCGGCGGCGCGCCGA GCGAGCAGGTCATCGAGCGCCACCGCGAGGAGTTCGGCGGCGAATACCGTTTCGAGCCCGAGGGCGAGCATCCCGTGGCG CCGCTCCGCACCGAGGGACCGCACGCCGAGCTCGGCTACTGGCGGGCCGGCGCCGGCGACGGCGTGGCCCGGATCGCGTG A
Upstream 100 bases:
>100_bases CTGCTCAAAGGCTAAGCTCTGCAACTTTAAGTCATCGCGCGGAACGCAACCGTGAAGCCGCCCGGCCGGTTTGCCTTGGG GTCATCCCAGGGAGATCGCC
Downstream 100 bases:
>100_bases AGGAGGCGAGGATGTCCGACGACAAGGAACGCGGCGGCCTGAAGGGGCTCGCCGACAAGGCCCAGGACATGGTGGGCGGG ATGGTCGGCATGGCCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MAFNPLNERGIPLERQLRNWSELNVQPYDTRDVHPYTRCRVILMNGVEVEAAMFSHNFNRNLADVEMKQRLQRVRRVEQQ QQKAVNWLIPGEKQENAIEVTIGYEQVAVDLTAWLARHEPDPYLKQVYEFGLLEDFDHLYRYANLMDLMGNGRRAEEITG DYTEITPGRPTIFEHRDPRDDIRRPMTVQAAHRQSILNAMTLVSAEQQTMNYYMTVGNRPTDPLARALYLEIAQIEEQHV SHYESCLDPTVSWLTNWVLHENHECWLYWSCFETEVDPRIKALWELHLSMEIEHLRIAARALEEVEGKDAAELIGAGYEA PMTFEENKAYLREVVSRQVDLTAWDSEFLPVEELPEGHRYFAYQAQVNAGGAPSEQVIERHREEFGGEYRFEPEGEHPVA PLRTEGPHAELGYWRAGAGDGVARIA
Sequences:
>Translated_426_residues MAFNPLNERGIPLERQLRNWSELNVQPYDTRDVHPYTRCRVILMNGVEVEAAMFSHNFNRNLADVEMKQRLQRVRRVEQQ QQKAVNWLIPGEKQENAIEVTIGYEQVAVDLTAWLARHEPDPYLKQVYEFGLLEDFDHLYRYANLMDLMGNGRRAEEITG DYTEITPGRPTIFEHRDPRDDIRRPMTVQAAHRQSILNAMTLVSAEQQTMNYYMTVGNRPTDPLARALYLEIAQIEEQHV SHYESCLDPTVSWLTNWVLHENHECWLYWSCFETEVDPRIKALWELHLSMEIEHLRIAARALEEVEGKDAAELIGAGYEA PMTFEENKAYLREVVSRQVDLTAWDSEFLPVEELPEGHRYFAYQAQVNAGGAPSEQVIERHREEFGGEYRFEPEGEHPVA PLRTEGPHAELGYWRAGAGDGVARIA >Mature_425_residues AFNPLNERGIPLERQLRNWSELNVQPYDTRDVHPYTRCRVILMNGVEVEAAMFSHNFNRNLADVEMKQRLQRVRRVEQQQ QKAVNWLIPGEKQENAIEVTIGYEQVAVDLTAWLARHEPDPYLKQVYEFGLLEDFDHLYRYANLMDLMGNGRRAEEITGD YTEITPGRPTIFEHRDPRDDIRRPMTVQAAHRQSILNAMTLVSAEQQTMNYYMTVGNRPTDPLARALYLEIAQIEEQHVS HYESCLDPTVSWLTNWVLHENHECWLYWSCFETEVDPRIKALWELHLSMEIEHLRIAARALEEVEGKDAAELIGAGYEAP MTFEENKAYLREVVSRQVDLTAWDSEFLPVEELPEGHRYFAYQAQVNAGGAPSEQVIERHREEFGGEYRFEPEGEHPVAP LRTEGPHAELGYWRAGAGDGVARIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49420; Mature: 49289
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNPLNERGIPLERQLRNWSELNVQPYDTRDVHPYTRCRVILMNGVEVEAAMFSHNFNR CCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCHHHEEEEEECCCEEHHHHHHCCCCC NLADVEMKQRLQRVRRVEQQQQKAVNWLIPGEKQENAIEVTIGYEQVAVDLTAWLARHEP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCC DPYLKQVYEFGLLEDFDHLYRYANLMDLMGNGRRAEEITGDYTEITPGRPTIFEHRDPRD CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCCCCCHH DIRRPMTVQAAHRQSILNAMTLVSAEQQTMNYYMTVGNRPTDPLARALYLEIAQIEEQHV HHCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH SHYESCLDPTVSWLTNWVLHENHECWLYWSCFETEVDPRIKALWELHLSMEIEHLRIAAR HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ALEEVEGKDAAELIGAGYEAPMTFEENKAYLREVVSRQVDLTAWDSEFLPVEELPEGHRY HHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCEE FAYQAQVNAGGAPSEQVIERHREEFGGEYRFEPEGEHPVAPLRTEGPHAELGYWRAGAGD EEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC GVARIA CCCCCC >Mature Secondary Structure AFNPLNERGIPLERQLRNWSELNVQPYDTRDVHPYTRCRVILMNGVEVEAAMFSHNFNR CCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCHHHEEEEEECCCEEHHHHHHCCCCC NLADVEMKQRLQRVRRVEQQQQKAVNWLIPGEKQENAIEVTIGYEQVAVDLTAWLARHEP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCC DPYLKQVYEFGLLEDFDHLYRYANLMDLMGNGRRAEEITGDYTEITPGRPTIFEHRDPRD CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCCCCCCCCCCHH DIRRPMTVQAAHRQSILNAMTLVSAEQQTMNYYMTVGNRPTDPLARALYLEIAQIEEQHV HHCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH SHYESCLDPTVSWLTNWVLHENHECWLYWSCFETEVDPRIKALWELHLSMEIEHLRIAAR HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ALEEVEGKDAAELIGAGYEAPMTFEENKAYLREVVSRQVDLTAWDSEFLPVEELPEGHRY HHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCEE FAYQAQVNAGGAPSEQVIERHREEFGGEYRFEPEGEHPVAPLRTEGPHAELGYWRAGAGD EEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC GVARIA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA