Click here to switch to the map view.

The map label for this gene is 197105120

Identifier: 197105120

GI number: 197105120

Start: 1864546

End: 1864947

Strand: Reverse

Name: 197105120

Synonym: PHZ_c1657

Alternate gene names: NA

Gene position: 1864947-1864546 (Counterclockwise)

Preceding gene: 197105121

Following gene: 197105119

Centisome position: 46.67

GC content: 71.89

Gene sequence:

>402_bases
GTGGCCAAGGGCCCGGACGCCTTCCGCACCATCTCGGAAGCGGCCGAAGAGCTGAACGTGCCGCAGCATGTCCTGCGGTT
CTGGGAGACCAAGTTCGCCTTCATCCGGCCCATGAAACGGGCGGGCGGGCGGCGGTTCTACCGACCCGCCGACATCGCCG
TGCTGCGCGGGGTGCGCCGCCTGCTGCACGACGAAGGCTACACCATCAAGGGCGTCCAGAAGCTGCACCGCGAGCAGGGG
CTGAAGCGCCTCGTCGCGGCGGGGGAGGGTATGTCCGCCGCCGCGCCGCCCGCGCCGTCGGCCGGGTCACCCGCGGCCCG
CGGCGACACCGACGCCCTGTTGACCGCCCTGCGCGATCTCGAGGCCGCCAAGCGTCGCCTGGACGACCTGCTCAAAGGCT
AA

Upstream 100 bases:

>100_bases
CCGCCGCCATCGAACCGCGCCGCGTGATCGGCTTCCGCGCCTCGCAGGTGATGAAGGCGCGGGTCGACCAGGCGCTGTCG
CGGTGAGGGCGCCTTAGGCC

Downstream 100 bases:

>100_bases
GCTCTGCAACTTTAAGTCATCGCGCGGAACGCAACCGTGAAGCCGCCCGGCCGGTTTGCCTTGGGGTCATCCCAGGGAGA
TCGCCATGGCATTCAACCCG

Product: transcriptional regulator, putative MerR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAKGPDAFRTISEAAEELNVPQHVLRFWETKFAFIRPMKRAGGRRFYRPADIAVLRGVRRLLHDEGYTIKGVQKLHREQG
LKRLVAAGEGMSAAAPPAPSAGSPAARGDTDALLTALRDLEAAKRRLDDLLKG

Sequences:

>Translated_133_residues
MAKGPDAFRTISEAAEELNVPQHVLRFWETKFAFIRPMKRAGGRRFYRPADIAVLRGVRRLLHDEGYTIKGVQKLHREQG
LKRLVAAGEGMSAAAPPAPSAGSPAARGDTDALLTALRDLEAAKRRLDDLLKG
>Mature_132_residues
AKGPDAFRTISEAAEELNVPQHVLRFWETKFAFIRPMKRAGGRRFYRPADIAVLRGVRRLLHDEGYTIKGVQKLHREQGL
KRLVAAGEGMSAAAPPAPSAGSPAARGDTDALLTALRDLEAAKRRLDDLLKG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 14601; Mature: 14470

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGPDAFRTISEAAEELNVPQHVLRFWETKFAFIRPMKRAGGRRFYRPADIAVLRGVRR
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLHDEGYTIKGVQKLHREQGLKRLVAAGEGMSAAAPPAPSAGSPAARGDTDALLTALRDL
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EAAKRRLDDLLKG
HHHHHHHHHHHCC
>Mature Secondary Structure 
AKGPDAFRTISEAAEELNVPQHVLRFWETKFAFIRPMKRAGGRRFYRPADIAVLRGVRR
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLHDEGYTIKGVQKLHREQGLKRLVAAGEGMSAAAPPAPSAGSPAARGDTDALLTALRDL
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EAAKRRLDDLLKG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]