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The map label for this gene is aapJ [H]

Identifier: 197105093

GI number: 197105093

Start: 1837722

End: 1838735

Strand: Reverse

Name: aapJ [H]

Synonym: PHZ_c1630

Alternate gene names: 197105093

Gene position: 1838735-1837722 (Counterclockwise)

Preceding gene: 197105098

Following gene: 197105089

Centisome position: 46.01

GC content: 73.57

Gene sequence:

>1014_bases
GTGGCCCCGCCGCCCAAGACCCCGGCCCAAACGGCCGCCTACGAGGCGACGCCCAGCCCGACGCTGGAGGCGGTCCGCCG
GCGCGGGCGGGTGACCTGCGGCGTCCATCCCGGCCTTCCCGGCTTCGCGATGCGCGACGCGCGCGGGATCTGGCGCGGCT
TCGACGTCGACGTCTGCCGGGCCGTGGCCGCCGCCGTGTTCGGCGACGCCGAGCGCGTGCGCTTCGTGCCCATCGACGGC
TCGGACCGTTTCCGCGAGCTCAGGGCCGAGCGGATCGACATCCTCTCGCGCAACACCTCGCTGACCTTGTCGCGCGACGC
GGGGCTGGGCCTGACCTTCCCGGCGACCACCTATTACGACGGCCAGGGGTTCCTGGTGGCCCGCGCGCTGGGCGTCGCCA
GCGCCGAGGAACTGGGCGGGGCGCGGGTCTGCGTCCAGGCCGGCACCGCCAGCGAGACGAACCTCGCCGACTTCTTCCGC
GCCCGCGGGCTGGACTACCAGCCGGTGCTCGCCAAGTCCGAGGAGGACGCCCGGCGCCTCTACGAGAGCGACGGCTGCGA
CGTGTTCAGCGCCGACATCTCGGGCCTGGCGGCCTCGCGCTCGCTGCTCTCCAACCCGAACGGCCACGTCATCCTGCCGA
ACGTGATCTCCAAGGAGCCGCTGGGCCCCGTGGTGCGCCAGGACGACCCCGCCTGGGCCGACATCGTCGCCTGGACGGTG
CACGCGATCGTCCTGGCCGAGGAGCTGGGCCTGTCCTCGCGCACAGTCGAGCAGGCGCGCGAGACGGCGACCGATCCCGA
GACCCGCCGGCTGCTGGGGGTGGAAGGAAACCTCGGCGAGCTCCTCGGCGTGCGGCGCGACTGGGCCTATCAGGTGATCC
GCCAGGTGGGCGCCTACCACGAGATCTTCCGCCGCGACCTTGGCGCCGACTCGGCCTTGAAGCTGGAGCGGGGCCTCAAC
GCCCTCTGGACCGCCCCGAAGCCGGGGCTGATGTACGCCCCGCCGGTCCGCTAG

Upstream 100 bases:

>100_bases
GTTTCAAGGAGCTGGGATGATCGGACGCCTCACGGCGATGGCGGCCATGGGCCTTCTGCTCGCAGCCTGCGAGGCCAAGC
CGCCGCCCGCGCCCGCGTCC

Downstream 100 bases:

>100_bases
CGGGCGACGACGACCTCGCAGTCGGCCCGCCCGCCCCATTCCGTCCACGAGCCGTCGTAGACCGCCACGTCCTCGCGGCC
CAGCCGGGCGAGCGCGAAGG

Product: lysine-arginine-ornithine-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MAPPPKTPAQTAAYEATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRFVPIDG
SDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASAEELGGARVCVQAGTASETNLADFFR
ARGLDYQPVLAKSEEDARRLYESDGCDVFSADISGLAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTV
HAIVLAEELGLSSRTVEQARETATDPETRRLLGVEGNLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSALKLERGLN
ALWTAPKPGLMYAPPVR

Sequences:

>Translated_337_residues
MAPPPKTPAQTAAYEATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRFVPIDG
SDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASAEELGGARVCVQAGTASETNLADFFR
ARGLDYQPVLAKSEEDARRLYESDGCDVFSADISGLAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTV
HAIVLAEELGLSSRTVEQARETATDPETRRLLGVEGNLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSALKLERGLN
ALWTAPKPGLMYAPPVR
>Mature_336_residues
APPPKTPAQTAAYEATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCRAVAAAVFGDAERVRFVPIDGS
DRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYDGQGFLVARALGVASAEELGGARVCVQAGTASETNLADFFRA
RGLDYQPVLAKSEEDARRLYESDGCDVFSADISGLAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTVH
AIVLAEELGLSSRTVEQARETATDPETRRLLGVEGNLGELLGVRRDWAYQVIRQVGAYHEIFRRDLGADSALKLERGLNA
LWTAPKPGLMYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36537; Mature: 36406

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPPKTPAQTAAYEATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCR
CCCCCCCCCHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHH
AVAAAVFGDAERVRFVPIDGSDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYD
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEC
GQGFLVARALGVASAEELGGARVCVQAGTASETNLADFFRARGLDYQPVLAKSEEDARRL
CCCEEEHHHHCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHH
YESDGCDVFSADISGLAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTV
HHCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCCCCCCCCHHHHHHHHH
HAIVLAEELGLSSRTVEQARETATDPETRRLLGVEGNLGELLGVRRDWAYQVIRQVGAYH
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EIFRRDLGADSALKLERGLNALWTAPKPGLMYAPPVR
HHHHHHCCCCHHHHHHHCCHHEECCCCCCCCCCCCCC
>Mature Secondary Structure 
APPPKTPAQTAAYEATPSPTLEAVRRRGRVTCGVHPGLPGFAMRDARGIWRGFDVDVCR
CCCCCCCCHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHH
AVAAAVFGDAERVRFVPIDGSDRFRELRAERIDILSRNTSLTLSRDAGLGLTFPATTYYD
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEC
GQGFLVARALGVASAEELGGARVCVQAGTASETNLADFFRARGLDYQPVLAKSEEDARRL
CCCEEEHHHHCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHH
YESDGCDVFSADISGLAASRSLLSNPNGHVILPNVISKEPLGPVVRQDDPAWADIVAWTV
HHCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCCCCCCCCHHHHHHHHH
HAIVLAEELGLSSRTVEQARETATDPETRRLLGVEGNLGELLGVRRDWAYQVIRQVGAYH
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EIFRRDLGADSALKLERGLNALWTAPKPGLMYAPPVR
HHHHHHCCCCHHHHHHHCCHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]