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The map label for this gene is lipB [H]

Identifier: 197105065

GI number: 197105065

Start: 1807337

End: 1808233

Strand: Reverse

Name: lipB [H]

Synonym: PHZ_c1602

Alternate gene names: 197105065

Gene position: 1808233-1807337 (Counterclockwise)

Preceding gene: 197105066

Following gene: 197105064

Centisome position: 45.25

GC content: 72.13

Gene sequence:

>897_bases
CTGGGGCCTGGACGAGGCCGAGCAGCGCACCGAGGACGCCTTCTTCGCCCTGTTCGACCGGATTCCCCGGCCATGAGCGC
GACGCTCGAGGTCGTGATCCTGGGCTGCGGCTCGTCGGGCGGGGTGCCGCGGGCCGACGGCGAATGGGGCGACTGCGACC
CGGCCAATCCGAAGAACCTGCGCACCCGTTGCTCGATCTTCGTGCGCCGCAAGGCCGCCGATCCGCTCTCCGAGACCAGC
GTGCTGGTAGACGCCTCGCCCGAGCTGCGCCAGCAGACCGCCCGCGCGGGCGTGAAGCGCCTGGACGCCGTGCTGCTGAC
CCACGACCACGCCGACCAGGTCCACGGCCTCGACGACGTGCGCGCGTTCTACCTGCGCCAGCAGGCGCGGATCCCCTGCT
GGATGGACCCGGCCACGACGCGCACCATGATGCGGCGGTTCGGCTACATCTTCGAGGGGGAGGGGGGCTATCCCGCGATC
TGCGAGCGCGAGGCCCTGCCGCCGCACGGGACCCCTTGGGCGGTGGAGGGGCCGTCCGGCCCGATCCCGGTGCGCACCTT
CGACCAGGACCACGGCGGCGTCCGCTCGGTGGGCTACCGCTTCGGCGGGGTGGCCTATTCCAGCGACGTCGTCGGCCTGG
ACGAGGCCGCCTTCGAGGCCCTGGCGGACCTGGACGTCTGGATCGTCGACGCCCTGCGCCGGCGCCCGCACCCGACCCAC
GCCCACCTGGACCGGGCCCTGGAGTGGATCGACCGGGTCAGGCCGCGCCGGGCGATCCTCACCAACATGCACATCGACAT
GGACTTCGAGACCCTCCGGCGCGAGCTTCCCGAGGGGGTCGAGCCGGCCTACGACGGGCTGACGATCCAACATGAGCTGA
GAGGCGAAAACGCGTGA

Upstream 100 bases:

>100_bases
AGACCGACTGCCCCTACCTCGCGCCCGTGCCCTACCGCGGGCGGCGCAACGAGCCGGCCTTCCTGCCGCACGTTCTGGCC
AGACTGGCCGAGATCCGCGG

Downstream 100 bases:

>100_bases
GAACACGGCCGCTTAAGCTGGGTTTCCTCGCCTCCGCTAACGGCTCCAGCGCCCAGGCGGTGATGGACGCCATCGAGGGC
GGCCGGCTGAACGCCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoate-protein ligase B; Lipoyl/octanoyl transferase; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MGPGRGRAAHRGRLLRPVRPDSPAMSATLEVVILGCGSSGGVPRADGEWGDCDPANPKNLRTRCSIFVRRKAADPLSETS
VLVDASPELRQQTARAGVKRLDAVLLTHDHADQVHGLDDVRAFYLRQQARIPCWMDPATTRTMMRRFGYIFEGEGGYPAI
CEREALPPHGTPWAVEGPSGPIPVRTFDQDHGGVRSVGYRFGGVAYSSDVVGLDEAAFEALADLDVWIVDALRRRPHPTH
AHLDRALEWIDRVRPRRAILTNMHIDMDFETLRRELPEGVEPAYDGLTIQHELRGENA

Sequences:

>Translated_298_residues
MGPGRGRAAHRGRLLRPVRPDSPAMSATLEVVILGCGSSGGVPRADGEWGDCDPANPKNLRTRCSIFVRRKAADPLSETS
VLVDASPELRQQTARAGVKRLDAVLLTHDHADQVHGLDDVRAFYLRQQARIPCWMDPATTRTMMRRFGYIFEGEGGYPAI
CEREALPPHGTPWAVEGPSGPIPVRTFDQDHGGVRSVGYRFGGVAYSSDVVGLDEAAFEALADLDVWIVDALRRRPHPTH
AHLDRALEWIDRVRPRRAILTNMHIDMDFETLRRELPEGVEPAYDGLTIQHELRGENA
>Mature_297_residues
GPGRGRAAHRGRLLRPVRPDSPAMSATLEVVILGCGSSGGVPRADGEWGDCDPANPKNLRTRCSIFVRRKAADPLSETSV
LVDASPELRQQTARAGVKRLDAVLLTHDHADQVHGLDDVRAFYLRQQARIPCWMDPATTRTMMRRFGYIFEGEGGYPAIC
EREALPPHGTPWAVEGPSGPIPVRTFDQDHGGVRSVGYRFGGVAYSSDVVGLDEAAFEALADLDVWIVDALRRRPHPTHA
HLDRALEWIDRVRPRRAILTNMHIDMDFETLRRELPEGVEPAYDGLTIQHELRGENA

Specific function: Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the lipB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004143
- InterPro:   IPR000544
- InterPro:   IPR020605 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB; PF00753 Lactamase_B [H]

EC number: =2.3.1.181 [H]

Molecular weight: Translated: 33018; Mature: 32887

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPGRGRAAHRGRLLRPVRPDSPAMSATLEVVILGCGSSGGVPRADGEWGDCDPANPKNL
CCCCCCCHHHCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
RTRCSIFVRRKAADPLSETSVLVDASPELRQQTARAGVKRLDAVLLTHDHADQVHGLDDV
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEECCCHHHHCCHHHH
RAFYLRQQARIPCWMDPATTRTMMRRFGYIFEGEGGYPAICEREALPPHGTPWAVEGPSG
HHHHHHHHCCCCEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCC
PIPVRTFDQDHGGVRSVGYRFGGVAYSSDVVGLDEAAFEALADLDVWIVDALRRRPHPTH
CCCCEECCCCCCCHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
AHLDRALEWIDRVRPRRAILTNMHIDMDFETLRRELPEGVEPAYDGLTIQHELRGENA
HHHHHHHHHHHHHCCHHHHHHHCEECCCHHHHHHHCCCCCCCHHCCEEEEECCCCCCC
>Mature Secondary Structure 
GPGRGRAAHRGRLLRPVRPDSPAMSATLEVVILGCGSSGGVPRADGEWGDCDPANPKNL
CCCCCCHHHCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
RTRCSIFVRRKAADPLSETSVLVDASPELRQQTARAGVKRLDAVLLTHDHADQVHGLDDV
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEECCCHHHHCCHHHH
RAFYLRQQARIPCWMDPATTRTMMRRFGYIFEGEGGYPAICEREALPPHGTPWAVEGPSG
HHHHHHHHCCCCEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCC
PIPVRTFDQDHGGVRSVGYRFGGVAYSSDVVGLDEAAFEALADLDVWIVDALRRRPHPTH
CCCCEECCCCCCCHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
AHLDRALEWIDRVRPRRAILTNMHIDMDFETLRRELPEGVEPAYDGLTIQHELRGENA
HHHHHHHHHHHHHCCHHHHHHHCEECCCHHHHHHHCCCCCCCHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12949112 [H]