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The map label for this gene is yicC [H]

Identifier: 197105025

GI number: 197105025

Start: 1763273

End: 1764154

Strand: Direct

Name: yicC [H]

Synonym: PHZ_c1562

Alternate gene names: 197105025

Gene position: 1763273-1764154 (Clockwise)

Preceding gene: 197105024

Following gene: 197105026

Centisome position: 44.12

GC content: 76.64

Gene sequence:

>882_bases
ATGGCCATCAGCGGGATGACGGGGTTCGGGCGGGCCGAGGGGGCGCTGGGGGCGTGGTCCTGGGCGGCCGAGGCGCGCAG
CGTGAACGGCCGGAACCTGGAGGTGCGGTTCCGCGGGCCGCCGGGGTTCGAGGGCCTGGAGCGGGCCGCCCGCGAGGGCG
CGCAGGGCCGCTTCCAGCGCGGCCAGGTGACGGTGGGGCTGCAGGCGAGGCGCGCCGAGGGCGCCGGCTCGGCCCGCATC
AACCTGGAGCAGCTCGAGCGCTACCTGGCGGCCGTGGAGCCCTATGTGGAGGACGGCCGCGCGAAGAAGCCGCGGATCGA
CGGCCTGCTCGCCCTGCGCGGGGTGGTGGAGGCCGAGGACGCGGCGCTGGACCCCGAGGCGCTGGCCGAGCTGGAGGCCG
CCATGGCCGCCTCGATCGCCGCCGCCCTCGACGGCCTGCTGGCGGCGCGGCGCGAGGAGGGCGGGGCCCTGCTGGGCCTG
CTGACCGGCTTCCTCGAGCGCATCGCGGCGCTGACCGCCCAGGCGCGGGAGACCGCCGCCGGCCAGCCGGCCGCCATCAA
GGAGCGGTTCGAGGCGCGGCTGAAGGAGCTGGCGGGCGCGGCGGCCACCGAGGAGCGGATCGTCCAGGAGGCCGCCGCCA
TGGCGGTGAAGGCCGACGTGCGCGAGGAGCTGGACCGGCTGTCCGGCCACGTCGACGCCGCCCGCGCGCTGCTGGCCGCC
GACGGCGGCGTGGGCCGGCGGCTGGACTTCCTGACCCAGGAGTTCATGCGCGAGGCCAACACCCTGTGCTCGAAGTCGGC
GCTCTCGGCCCTGACCGCGGTGGGCCTGGAGCTGAAGGCGACCATCGAGCAGTTCCGCGAGCAGGTGCAGAACGTGGAGT
AG

Upstream 100 bases:

>100_bases
GGGTGACGGTCGAAGGCCGAGCTTGTAGGGCCGGGCGCGGCGATGATGGGTCCGGGTCTTCGCCTGCGGCGAAACCGGGA
TGACGATCTGAGGAGTTCTT

Downstream 100 bases:

>100_bases
GGGGCGGGCGCCCTGCCGCTTCGAGAGAGGTCCACGAACCACACGAACCACACGAACGGCCAGGCTCGGCCCTTCCTCCC
GATTGTCATCCCGGAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAISGMTGFGRAEGALGAWSWAAEARSVNGRNLEVRFRGPPGFEGLERAAREGAQGRFQRGQVTVGLQARRAEGAGSARI
NLEQLERYLAAVEPYVEDGRAKKPRIDGLLALRGVVEAEDAALDPEALAELEAAMAASIAAALDGLLAARREEGGALLGL
LTGFLERIAALTAQARETAAGQPAAIKERFEARLKELAGAAATEERIVQEAAAMAVKADVREELDRLSGHVDAARALLAA
DGGVGRRLDFLTQEFMREANTLCSKSALSALTAVGLELKATIEQFREQVQNVE

Sequences:

>Translated_293_residues
MAISGMTGFGRAEGALGAWSWAAEARSVNGRNLEVRFRGPPGFEGLERAAREGAQGRFQRGQVTVGLQARRAEGAGSARI
NLEQLERYLAAVEPYVEDGRAKKPRIDGLLALRGVVEAEDAALDPEALAELEAAMAASIAAALDGLLAARREEGGALLGL
LTGFLERIAALTAQARETAAGQPAAIKERFEARLKELAGAAATEERIVQEAAAMAVKADVREELDRLSGHVDAARALLAA
DGGVGRRLDFLTQEFMREANTLCSKSALSALTAVGLELKATIEQFREQVQNVE
>Mature_292_residues
AISGMTGFGRAEGALGAWSWAAEARSVNGRNLEVRFRGPPGFEGLERAAREGAQGRFQRGQVTVGLQARRAEGAGSARIN
LEQLERYLAAVEPYVEDGRAKKPRIDGLLALRGVVEAEDAALDPEALAELEAAMAASIAAALDGLLAARREEGGALLGLL
TGFLERIAALTAQARETAAGQPAAIKERFEARLKELAGAAATEERIVQEAAAMAVKADVREELDRLSGHVDAARALLAAD
GGVGRRLDFLTQEFMREANTLCSKSALSALTAVGLELKATIEQFREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=298, Percent_Identity=36.9127516778523, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 31047; Mature: 30915

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00457 NA_SOLUT_SYMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISGMTGFGRAEGALGAWSWAAEARSVNGRNLEVRFRGPPGFEGLERAAREGAQGRFQR
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC
GQVTVGLQARRAEGAGSARINLEQLERYLAAVEPYVEDGRAKKPRIDGLLALRGVVEAED
CCEEEEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AALDPEALAELEAAMAASIAAALDGLLAARREEGGALLGLLTGFLERIAALTAQARETAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GQPAAIKERFEARLKELAGAAATEERIVQEAAAMAVKADVREELDRLSGHVDAARALLAA
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
DGGVGRRLDFLTQEFMREANTLCSKSALSALTAVGLELKATIEQFREQVQNVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AISGMTGFGRAEGALGAWSWAAEARSVNGRNLEVRFRGPPGFEGLERAAREGAQGRFQR
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC
GQVTVGLQARRAEGAGSARINLEQLERYLAAVEPYVEDGRAKKPRIDGLLALRGVVEAED
CCEEEEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AALDPEALAELEAAMAASIAAALDGLLAARREEGGALLGLLTGFLERIAALTAQARETAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GQPAAIKERFEARLKELAGAAATEERIVQEAAAMAVKADVREELDRLSGHVDAARALLAA
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
DGGVGRRLDFLTQEFMREANTLCSKSALSALTAVGLELKATIEQFREQVQNVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]