| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yceG [C]
Identifier: 197105024
GI number: 197105024
Start: 1761972
End: 1762988
Strand: Direct
Name: yceG [C]
Synonym: PHZ_c1561
Alternate gene names: 197105024
Gene position: 1761972-1762988 (Clockwise)
Preceding gene: 197105023
Following gene: 197105025
Centisome position: 44.09
GC content: 75.91
Gene sequence:
>1017_bases GTGAGCCGCAAGGCCCGCCCCCGCAGCGCGCGCAAGGGAGGCCTCGTCCTCCTGGCCCTGGGCGCGCTCGCGGCCCTGAT CGCCGTCGCGGCCGTCTGGAGCTACGCCGGCCCCGGCCCGGCGGCGAAGTCGGGCGAGACGACGGTCGTCGTCCTGGAGC GCGGCTCGGGCCTGACCCGCATCGCGGGCGCCCTGGAGGACGCGGGCGCCATCGGCTCGGCGGGCCTGTTCGTCCTGGCC GCCCGCCTGACCGGCGCGGCGGGCGAGCTGAAGGCCGGCGAGTACGAGTTCCCCTCCCGCGCGCCGATGGCCCGGGTGCT GGCCGACATCCGCGCCGGCAAGGTGGTGCGCCACTTCATCACCATCCCCGAGGGCTGGACCAGCGAGATGGCCGCCGAGG CGGTGAACCGCCAGCCGGTGCTGACCGGGACCGCGCCCGTGGCCCCCGAGGGCGCGCTGCTGCCCGACACCTATCAGGTG CAGCGGGGCGACGACCGGGCCGAGGTGATCGCCCGCATGCGCAAGGCGCACGACGACCTGATGGCCGAGCTGTGGCCCAA GCGCCAGCCGGGCCTGCCGTTCGACACGCCCGAGGAGGCGGTCGTCCTGGCCTCCATCGTCGAGAAGGAGACCGGGATCG CGTCCGAGCGGCCGCGGGTGGCGGCGGTGTTCGTCAACCGCCTGCGCCAGGGGATGCGGCTGGAGAGCGACCCCACCATC ATCTACGGCGTCAGCAAGGGCCGGGCCCTGGGGCGGGGGATCCGCGCCTCGGAACTGGCGGCCCAGACGCCCTGGAACAC CTACCGGATCGACGGCCTGCCGCCGACGCCGATCGCCAACCCGGGCCGGGCCTCGCTGGAGGCGGTGCTGAACCCGCCCA GGACCGACGAGCTGTTCTTCGTCGCCGACGGGACGGGCGGCCACGTGTTCGCGACGACCTACGCCGACCACCAGCGCAAC GTCGCCCGCTGGCGCCAGGTGGAGCGCGAGCGCGCGGCGGCCGCGGCGGCGCCGTAG
Upstream 100 bases:
>100_bases TCGTGCCGCACAAGGCCAAGCCGATGAAGATCGACGTGGCCATGTCGAACAGCTTCGGCTTCGGCGGCACGAACGCCTGC GTGATCTTCAAGAAGCCCGC
Downstream 100 bases:
>100_bases AGAGAGCGCTGAAGGCAATGAACGGGGCCGATGGGAGACGCCGCGGGAGCGGCGGATCAGCCCTTTGACACGAAGACCAC CAAGGACACGAAGGTCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSRKARPRSARKGGLVLLALGALAALIAVAAVWSYAGPGPAAKSGETTVVVLERGSGLTRIAGALEDAGAIGSAGLFVLA ARLTGAAGELKAGEYEFPSRAPMARVLADIRAGKVVRHFITIPEGWTSEMAAEAVNRQPVLTGTAPVAPEGALLPDTYQV QRGDDRAEVIARMRKAHDDLMAELWPKRQPGLPFDTPEEAVVLASIVEKETGIASERPRVAAVFVNRLRQGMRLESDPTI IYGVSKGRALGRGIRASELAAQTPWNTYRIDGLPPTPIANPGRASLEAVLNPPRTDELFFVADGTGGHVFATTYADHQRN VARWRQVERERAAAAAAP
Sequences:
>Translated_338_residues MSRKARPRSARKGGLVLLALGALAALIAVAAVWSYAGPGPAAKSGETTVVVLERGSGLTRIAGALEDAGAIGSAGLFVLA ARLTGAAGELKAGEYEFPSRAPMARVLADIRAGKVVRHFITIPEGWTSEMAAEAVNRQPVLTGTAPVAPEGALLPDTYQV QRGDDRAEVIARMRKAHDDLMAELWPKRQPGLPFDTPEEAVVLASIVEKETGIASERPRVAAVFVNRLRQGMRLESDPTI IYGVSKGRALGRGIRASELAAQTPWNTYRIDGLPPTPIANPGRASLEAVLNPPRTDELFFVADGTGGHVFATTYADHQRN VARWRQVERERAAAAAAP >Mature_337_residues SRKARPRSARKGGLVLLALGALAALIAVAAVWSYAGPGPAAKSGETTVVVLERGSGLTRIAGALEDAGAIGSAGLFVLAA RLTGAAGELKAGEYEFPSRAPMARVLADIRAGKVVRHFITIPEGWTSEMAAEAVNRQPVLTGTAPVAPEGALLPDTYQVQ RGDDRAEVIARMRKAHDDLMAELWPKRQPGLPFDTPEEAVVLASIVEKETGIASERPRVAAVFVNRLRQGMRLESDPTII YGVSKGRALGRGIRASELAAQTPWNTYRIDGLPPTPIANPGRASLEAVLNPPRTDELFFVADGTGGHVFATTYADHQRNV ARWRQVERERAAAAAAP
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=304, Percent_Identity=34.2105263157895, Blast_Score=165, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 35886; Mature: 35755
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKARPRSARKGGLVLLALGALAALIAVAAVWSYAGPGPAAKSGETTVVVLERGSGLTR CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHH IAGALEDAGAIGSAGLFVLAARLTGAAGELKAGEYEFPSRAPMARVLADIRAGKVVRHFI HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE TIPEGWTSEMAAEAVNRQPVLTGTAPVAPEGALLPDTYQVQRGDDRAEVIARMRKAHDDL ECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH MAELWPKRQPGLPFDTPEEAVVLASIVEKETGIASERPRVAAVFVNRLRQGMRLESDPTI HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE IYGVSKGRALGRGIRASELAAQTPWNTYRIDGLPPTPIANPGRASLEAVLNPPRTDELFF EEECCCCCHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEE VADGTGGHVFATTYADHQRNVARWRQVERERAAAAAAP EEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRKARPRSARKGGLVLLALGALAALIAVAAVWSYAGPGPAAKSGETTVVVLERGSGLTR CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHH IAGALEDAGAIGSAGLFVLAARLTGAAGELKAGEYEFPSRAPMARVLADIRAGKVVRHFI HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE TIPEGWTSEMAAEAVNRQPVLTGTAPVAPEGALLPDTYQVQRGDDRAEVIARMRKAHDDL ECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH MAELWPKRQPGLPFDTPEEAVVLASIVEKETGIASERPRVAAVFVNRLRQGMRLESDPTI HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE IYGVSKGRALGRGIRASELAAQTPWNTYRIDGLPPTPIANPGRASLEAVLNPPRTDELFF EEECCCCCHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEE VADGTGGHVFATTYADHQRNVARWRQVERERAAAAAAP EEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]