| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104891
Identifier: 197104891
GI number: 197104891
Start: 1616714
End: 1617895
Strand: Direct
Name: 197104891
Synonym: PHZ_c1426
Alternate gene names: NA
Gene position: 1616714-1617895 (Clockwise)
Preceding gene: 197104890
Following gene: 197104894
Centisome position: 40.46
GC content: 68.95
Gene sequence:
>1182_bases GTGACCGGCTCCTCGTCGCCGCTCGAATGGCGCGCGATCTTCGTGCTCCCCAACCTCGCGCTCGCTGGTGCGATCGACGG GGAACTGGCGGCGCTCGTCCCGGCCAGCGATGCACGACTGCGCCAGCTGACCCGATACCAGCCGATGCTGCGCAGCTTCC TGTGCCGGTTCAGCGACGCCTTCGGCGAGCGCGTCGCGCCGGCGGTGCTGCTGCTGCGGTCGGACGCGCCCAGCGCCTTC AACGAAATCGGTGCCATCGCGAGCTTCCGAGACGCGATCGCGATCTCGGCGATCAGCGCCGCCCGCACCCAGGAGCTGCT CCACCCGCGCGGTCATCGCATGCTGTTCGGCGACAGCTTCGCCTTCTATCCCTGGATGGTTGACCGTCATGACGAGCACC TGATCGGCAGCACGCCGGCGCTGCTCGGCGTCCACGACGTGTCCGCATTCCATGGCCAGTCTGCCCCCGAGCTGTTCCGC ACGCCGCTGGATGCCAGCGACCTCGATGCGACACTGCTCGGCGCCCTGCTGAACCGCTGGCGTCGCCGTCATCTCTCGGC CGATGCCGAGTGGGCGGACATTGCGCTCATGCGCTCGCTCAACATGGCCTACCACGCCTCGCTCCTCCCGGCCGCCAGCG ACACCACCTTCTATGATGTCGGCAGGCTGATCTCGCTCTGGGTCAGCGCTTTCGAGATCCTCGTCCACCCGGGCGGGAGC GGCATCGCCAATCGCGACCGCGTGCTCGCGCTCCTCGAGCAGACGCCGTGGCAGCGCACCGCTTCGGCCGACAAAGCGTA CGACACCGGCGGCAAGACGAAGGTCCGTCGCACGCTCGCGTCCTGGCTCTACCAGACGCTCAACGACCGCCGGAATGACT TCCTCCACGGCAACCCGATCGAGCGGGACGCGCTCGTGCTGCCCGTCTCGGGTCGCAACCTGTTCGAGTACGCCGCGCCC CTGTACCGGTTGGCGTTGACCGCCTTCCTAGACCTGTCGCCCGATGAACCCCTGCCGGACGCCTCACAGCCGCGGGCGCT CGGCGAGGCGATCGCGCGGCGTATGGCCTTCCTCGATCCCCAAGAAACCGTCGAGGATGCCCTGCTGACGGCCATACGTC CGCCCGCCGAGCCGACGAGACATCGCCGTCGGCGGGTCAGCCGCCCCGCGCCAACAGACTAG
Upstream 100 bases:
>100_bases CCGCGGTGCTCGAACGCAAGGTCCGTCGCGCGGCCGAGACCGGCCGCGCCTTTATCCCCGTAAGCGAGCTGTTCGCGTCA GCCCCGACCAGGGAGCCCCG
Downstream 100 bases:
>100_bases GTGCCCAGCGCAGCTCGATTCCCCTGTTAACGGCTGGCCGGCTCGACATTCGTTCGAAATGCTCTCTGCCCATACCTCGA CAGGCTCCTGACCGCGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTGSSSPLEWRAIFVLPNLALAGAIDGELAALVPASDARLRQLTRYQPMLRSFLCRFSDAFGERVAPAVLLLRSDAPSAF NEIGAIASFRDAIAISAISAARTQELLHPRGHRMLFGDSFAFYPWMVDRHDEHLIGSTPALLGVHDVSAFHGQSAPELFR TPLDASDLDATLLGALLNRWRRRHLSADAEWADIALMRSLNMAYHASLLPAASDTTFYDVGRLISLWVSAFEILVHPGGS GIANRDRVLALLEQTPWQRTASADKAYDTGGKTKVRRTLASWLYQTLNDRRNDFLHGNPIERDALVLPVSGRNLFEYAAP LYRLALTAFLDLSPDEPLPDASQPRALGEAIARRMAFLDPQETVEDALLTAIRPPAEPTRHRRRRVSRPAPTD
Sequences:
>Translated_393_residues MTGSSSPLEWRAIFVLPNLALAGAIDGELAALVPASDARLRQLTRYQPMLRSFLCRFSDAFGERVAPAVLLLRSDAPSAF NEIGAIASFRDAIAISAISAARTQELLHPRGHRMLFGDSFAFYPWMVDRHDEHLIGSTPALLGVHDVSAFHGQSAPELFR TPLDASDLDATLLGALLNRWRRRHLSADAEWADIALMRSLNMAYHASLLPAASDTTFYDVGRLISLWVSAFEILVHPGGS GIANRDRVLALLEQTPWQRTASADKAYDTGGKTKVRRTLASWLYQTLNDRRNDFLHGNPIERDALVLPVSGRNLFEYAAP LYRLALTAFLDLSPDEPLPDASQPRALGEAIARRMAFLDPQETVEDALLTAIRPPAEPTRHRRRRVSRPAPTD >Mature_392_residues TGSSSPLEWRAIFVLPNLALAGAIDGELAALVPASDARLRQLTRYQPMLRSFLCRFSDAFGERVAPAVLLLRSDAPSAFN EIGAIASFRDAIAISAISAARTQELLHPRGHRMLFGDSFAFYPWMVDRHDEHLIGSTPALLGVHDVSAFHGQSAPELFRT PLDASDLDATLLGALLNRWRRRHLSADAEWADIALMRSLNMAYHASLLPAASDTTFYDVGRLISLWVSAFEILVHPGGSG IANRDRVLALLEQTPWQRTASADKAYDTGGKTKVRRTLASWLYQTLNDRRNDFLHGNPIERDALVLPVSGRNLFEYAAPL YRLALTAFLDLSPDEPLPDASQPRALGEAIARRMAFLDPQETVEDALLTAIRPPAEPTRHRRRRVSRPAPTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43473; Mature: 43342
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSSSPLEWRAIFVLPNLALAGAIDGELAALVPASDARLRQLTRYQPMLRSFLCRFSDA CCCCCCCCCEEEEEEECCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FGERVAPAVLLLRSDAPSAFNEIGAIASFRDAIAISAISAARTQELLHPRGHRMLFGDSF HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC AFYPWMVDRHDEHLIGSTPALLGVHDVSAFHGQSAPELFRTPLDASDLDATLLGALLNRW EECCEEECCCCCCCCCCCCHHEEHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH RRRHLSADAEWADIALMRSLNMAYHASLLPAASDTTFYDVGRLISLWVSAFEILVHPGGS HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GIANRDRVLALLEQTPWQRTASADKAYDTGGKTKVRRTLASWLYQTLNDRRNDFLHGNPI CCCCHHHHHHHHHHCCCHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ERDALVLPVSGRNLFEYAAPLYRLALTAFLDLSPDEPLPDASQPRALGEAIARRMAFLDP CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCH QETVEDALLTAIRPPAEPTRHRRRRVSRPAPTD HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TGSSSPLEWRAIFVLPNLALAGAIDGELAALVPASDARLRQLTRYQPMLRSFLCRFSDA CCCCCCCCEEEEEEECCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FGERVAPAVLLLRSDAPSAFNEIGAIASFRDAIAISAISAARTQELLHPRGHRMLFGDSF HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC AFYPWMVDRHDEHLIGSTPALLGVHDVSAFHGQSAPELFRTPLDASDLDATLLGALLNRW EECCEEECCCCCCCCCCCCHHEEHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH RRRHLSADAEWADIALMRSLNMAYHASLLPAASDTTFYDVGRLISLWVSAFEILVHPGGS HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC GIANRDRVLALLEQTPWQRTASADKAYDTGGKTKVRRTLASWLYQTLNDRRNDFLHGNPI CCCCHHHHHHHHHHCCCHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ERDALVLPVSGRNLFEYAAPLYRLALTAFLDLSPDEPLPDASQPRALGEAIARRMAFLDP CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCH QETVEDALLTAIRPPAEPTRHRRRRVSRPAPTD HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA