| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104894
Identifier: 197104894
GI number: 197104894
Start: 1620678
End: 1621316
Strand: Direct
Name: 197104894
Synonym: PHZ_c1429
Alternate gene names: NA
Gene position: 1620678-1621316 (Clockwise)
Preceding gene: 197104891
Following gene: 197104895
Centisome position: 40.55
GC content: 69.17
Gene sequence:
>639_bases GTGACCTTTGACGGCGCTTCCGCCGGCTACAAGCGGGCGCTTGGCGGCGTGATCGCGATCAATCTGGTTGGATTTGTCGT GGTGGCGATCGGCAGCCTCTGGGCGGGCTCGGCGTCGCTCGCGGCCAACACCCTGGATTTCGCCGCGGACGCCGCGACCT ACGGCTTGAGCCTCTGGGCCATCGGCAAGAGCGTGCGGGTCCGCTCCGGCGCGGCCTTGATCAAGAGCGGCAGCCTGGCG GTCATGGCGCTGGCGATCCTCGGCTTCGCGGTGTGGCGCGCCTTGGTCGGCGCGCCGCCCGAAGGTGCGGCCATCTCCGG CCTTGGCTTGTTCGGGGCTGCGGCCAATCTCCTCGCGGCGCTCTTGCTGGTCCGCTACCGGGAAGGCGACGCCAACGTGC GCTCGGTGTGGCTCTGCACCCGCAATGACCTCATCCAGTGCCTGGCGGTCGCCGCCACCGGCGTCGCCGTCATGGTGACC GGCTCCCGTTGGCCGGACCTGATCGTCGGGGTCTTGTTGGCCGCGGTGTTCCTGCGCTCAGCCTGGCAGATCACCGTCCA GGCGCGCCAGGAGCTGAAGGCCGCCGCCGCCAAGCCGGATTTTATAACGCATTCCCGTCCGTCATCGGCCTCGGTATAG
Upstream 100 bases:
>100_bases CTCTAGCGACTAGAGGATGCAGGCTGTCTTTATGTCCAGCTGCTCCACCTCGTCCGAAGCGCAGCCAGCCACCTCCAGCG GCTGCGGCTGCGGCCATCCC
Downstream 100 bases:
>100_bases GTCCGCGCGATGGCACGAACCTCACCCTGGTGGCGCAAGGTCGGCATGGCGCTCGCCGCGCTGGTGCTGACCGTGCTCAC GCTGGGGCCGAGTCTCGATG
Product: Co/Zn/Cd efflux system component
Products: NA
Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Family Protein; Cation Efflux Permease; Cation Efflux Protein ; Co/Zn/Cd Efflux Protein; Cation Efflux System Protein; Cation Diffusion Facilitator Family Transporter; CDF Family Cobalt/Cadmium/Zinc Transporter
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTFDGASAGYKRALGGVIAINLVGFVVVAIGSLWAGSASLAANTLDFAADAATYGLSLWAIGKSVRVRSGAALIKSGSLA VMALAILGFAVWRALVGAPPEGAAISGLGLFGAAANLLAALLLVRYREGDANVRSVWLCTRNDLIQCLAVAATGVAVMVT GSRWPDLIVGVLLAAVFLRSAWQITVQARQELKAAAAKPDFITHSRPSSASV
Sequences:
>Translated_212_residues MTFDGASAGYKRALGGVIAINLVGFVVVAIGSLWAGSASLAANTLDFAADAATYGLSLWAIGKSVRVRSGAALIKSGSLA VMALAILGFAVWRALVGAPPEGAAISGLGLFGAAANLLAALLLVRYREGDANVRSVWLCTRNDLIQCLAVAATGVAVMVT GSRWPDLIVGVLLAAVFLRSAWQITVQARQELKAAAAKPDFITHSRPSSASV >Mature_211_residues TFDGASAGYKRALGGVIAINLVGFVVVAIGSLWAGSASLAANTLDFAADAATYGLSLWAIGKSVRVRSGAALIKSGSLAV MALAILGFAVWRALVGAPPEGAAISGLGLFGAAANLLAALLLVRYREGDANVRSVWLCTRNDLIQCLAVAATGVAVMVTG SRWPDLIVGVLLAAVFLRSAWQITVQARQELKAAAAKPDFITHSRPSSASV
Specific function: Unknown
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21694; Mature: 21562
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDGASAGYKRALGGVIAINLVGFVVVAIGSLWAGSASLAANTLDFAADAATYGLSLWA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE IGKSVRVRSGAALIKSGSLAVMALAILGFAVWRALVGAPPEGAAISGLGLFGAAANLLAA CCCHHEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHH LLLVRYREGDANVRSVWLCTRNDLIQCLAVAATGVAVMVTGSRWPDLIVGVLLAAVFLRS HHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH AWQITVQARQELKAAAAKPDFITHSRPSSASV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TFDGASAGYKRALGGVIAINLVGFVVVAIGSLWAGSASLAANTLDFAADAATYGLSLWA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE IGKSVRVRSGAALIKSGSLAVMALAILGFAVWRALVGAPPEGAAISGLGLFGAAANLLAA CCCHHEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHH LLLVRYREGDANVRSVWLCTRNDLIQCLAVAATGVAVMVTGSRWPDLIVGVLLAAVFLRS HHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH AWQITVQARQELKAAAAKPDFITHSRPSSASV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA