| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104890
Identifier: 197104890
GI number: 197104890
Start: 1615875
End: 1616717
Strand: Direct
Name: 197104890
Synonym: PHZ_c1425
Alternate gene names: NA
Gene position: 1615875-1616717 (Clockwise)
Preceding gene: 197104889
Following gene: 197104891
Centisome position: 40.43
GC content: 67.62
Gene sequence:
>843_bases GTGCGCGGCCGCGGCTATGTGCTCGACTTCTCCGATCCGGGTTTCAGCGACTTCTTCGCCGCCGAGCTCGACGTCGACAT CGACGATCCGATCTACGCCGAGAACGGCGGCTCCAAAGGCAAGCGTCTGCGCTGCTTCCTCCAGAAGGTCGATGGCGCGA CCGCCGCGCGAACGCTCCAGGCGTTGTGGGAGCATCGCGCCGAGTTCCTCGCCCGCACCAATCAGCCCGATCCCGTCGTC AACGCCGAGGGTCGCTTCCTCTCCCTCATCGCCCGCCTTATGGACCGGGCCGAAGGTGGTACGGGCGGCCAAGCCCCCGT TCCTGCCACAGACTGGCGGCTCCAGGCCGAGCTGAAGGACGGGCTGATCGCCATCGCTTCGCTTCCGCCCCAGGAACGCG GCTACGAATTCGAGGCCTTCCTGCGGCGGTCTTTCGATGCGGCGGGCCTGGCGGCGCGCGAGCCTTTCCGAAATCTCGGG GAGCAGATCGATGGCAGCTTCCTGCTGGGCCACGAGACCTATCTGCTCGAAGCGAAGTGGACCGCCTCGCCGATCGGCGT CGCCGACCTCCACGGTTTCCACGGCAAGCTGGAGCAGAAGGCGTCCTGGGCGCGCGGCCTCTTCGTGAGCTACAACGGAT TCAGCGAACAGAGGCTGGCCGCCTTCGGGCCAGGCAAGCGCCTGATCTGCATGGACGGCCGTGATCTCTTCGACGCGCTC GACCGCTCGATCCCACTCGCCGCGGTGCTCGAACGCAAGGTCCGTCGCGCGGCCGAGACCGGCCGCGCCTTTATCCCCGT AAGCGAGCTGTTCGCGTCAGCCCCGACCAGGGAGCCCCGGTGA
Upstream 100 bases:
>100_bases CAATCTCCGCGCCCTCGTGACGGCCGTGGACTGAGGGAGAGACATCATCGCCGCGATCCGATCCGTCGATCTGAGGTTAG TCGAGGAGCTGGTCGAGTTC
Downstream 100 bases:
>100_bases CCGGCTCCTCGTCGCCGCTCGAATGGCGCGCGATCTTCGTGCTCCCCAACCTCGCGCTCGCTGGTGCGATCGACGGGGAA CTGGCGGCGCTCGTCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRGRGYVLDFSDPGFSDFFAAELDVDIDDPIYAENGGSKGKRLRCFLQKVDGATAARTLQALWEHRAEFLARTNQPDPVV NAEGRFLSLIARLMDRAEGGTGGQAPVPATDWRLQAELKDGLIAIASLPPQERGYEFEAFLRRSFDAAGLAAREPFRNLG EQIDGSFLLGHETYLLEAKWTASPIGVADLHGFHGKLEQKASWARGLFVSYNGFSEQRLAAFGPGKRLICMDGRDLFDAL DRSIPLAAVLERKVRRAAETGRAFIPVSELFASAPTREPR
Sequences:
>Translated_280_residues MRGRGYVLDFSDPGFSDFFAAELDVDIDDPIYAENGGSKGKRLRCFLQKVDGATAARTLQALWEHRAEFLARTNQPDPVV NAEGRFLSLIARLMDRAEGGTGGQAPVPATDWRLQAELKDGLIAIASLPPQERGYEFEAFLRRSFDAAGLAAREPFRNLG EQIDGSFLLGHETYLLEAKWTASPIGVADLHGFHGKLEQKASWARGLFVSYNGFSEQRLAAFGPGKRLICMDGRDLFDAL DRSIPLAAVLERKVRRAAETGRAFIPVSELFASAPTREPR >Mature_280_residues MRGRGYVLDFSDPGFSDFFAAELDVDIDDPIYAENGGSKGKRLRCFLQKVDGATAARTLQALWEHRAEFLARTNQPDPVV NAEGRFLSLIARLMDRAEGGTGGQAPVPATDWRLQAELKDGLIAIASLPPQERGYEFEAFLRRSFDAAGLAAREPFRNLG EQIDGSFLLGHETYLLEAKWTASPIGVADLHGFHGKLEQKASWARGLFVSYNGFSEQRLAAFGPGKRLICMDGRDLFDAL DRSIPLAAVLERKVRRAAETGRAFIPVSELFASAPTREPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30873; Mature: 30873
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRGYVLDFSDPGFSDFFAAELDVDIDDPIYAENGGSKGKRLRCFLQKVDGATAARTLQ CCCCCEEEECCCCCCCHHEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHH ALWEHRAEFLARTNQPDPVVNAEGRFLSLIARLMDRAEGGTGGQAPVPATDWRLQAELKD HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC GLIAIASLPPQERGYEFEAFLRRSFDAAGLAAREPFRNLGEQIDGSFLLGHETYLLEAKW CEEEEECCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEEC TASPIGVADLHGFHGKLEQKASWARGLFVSYNGFSEQRLAAFGPGKRLICMDGRDLFDAL CCCCCCHHHHCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCEEEEECCHHHHHHH DRSIPLAAVLERKVRRAAETGRAFIPVSELFASAPTREPR HCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCC >Mature Secondary Structure MRGRGYVLDFSDPGFSDFFAAELDVDIDDPIYAENGGSKGKRLRCFLQKVDGATAARTLQ CCCCCEEEECCCCCCCHHEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHH ALWEHRAEFLARTNQPDPVVNAEGRFLSLIARLMDRAEGGTGGQAPVPATDWRLQAELKD HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC GLIAIASLPPQERGYEFEAFLRRSFDAAGLAAREPFRNLGEQIDGSFLLGHETYLLEAKW CEEEEECCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEEC TASPIGVADLHGFHGKLEQKASWARGLFVSYNGFSEQRLAAFGPGKRLICMDGRDLFDAL CCCCCCHHHHCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCEEEEECCHHHHHHH DRSIPLAAVLERKVRRAAETGRAFIPVSELFASAPTREPR HCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA