| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104888
Identifier: 197104888
GI number: 197104888
Start: 1613671
End: 1615041
Strand: Direct
Name: 197104888
Synonym: PHZ_c1423
Alternate gene names: NA
Gene position: 1613671-1615041 (Clockwise)
Preceding gene: 197104887
Following gene: 197104889
Centisome position: 40.38
GC content: 68.34
Gene sequence:
>1371_bases ATGAATCATCACAGCCTCGTCTGCCGGCTCGGCCCGGGCGATACCGCCACCGTCAAACCCTCACGATCCGACAGCAAGCT CACGGAGGTCTCGTTCGTCGATGGCGATCAGCGCCTCGGATACGGCCTCGGCCAGGCGCTCGATCAACTGCGCGAGCTCG GCCTCCGCCCCTCCGAACGCACGATCGATCTCGCTCTCCTCGCCGCGGCCCTGACCGCGGCCGACACCCGGATCTCGCGC TCGACCGAGTCGCAGAACGCCTGGACGCGCGAGATCGACCTCTGCTTGCCCGTTGCGGAGCCGAAGCTGTGGGAGGGCCT GGCGCCCCTGATCGTCACGACGCTCAACTTCCTCACCGGGGATCGCTGGGGCGTGCGGTTCCGCGCGCGGCCCAAGGGGA TCGCCGCCCTCGCGCCGGCCCCGACCAAGCTCCGGACCGCGACCGCCGACTCCGTCTGCCTCTTCTCGGGCGGCCTCGAC AGCTTCATCGGCGCGATCGACCTGCTCGCGGACGGTAAGGCCCCGATGCTCGTCAGCCATTACTGGGATGGGATCACCAG CACCCACCAGACCTATTGCGCCGACGTCATCGCCAAGCGGTTCCCCAAGCAGCGCTTCCATCACCTGCGCGCCCGCGTCG GCTTCCCGAACGACCTCGTCGACGGATCGGCGGGCGAGAACACCTTGCGGGGTCGCTCGTTCCTGTTCTTCGCGCTCGCT GCCATGGCGGCTGACGCACTCGGCGTGGGACTCATCCACGTCCCGGAGAATGGGTTGATCTCGCTGAACGTCCCCCTCGA TCCGACGCGGCTCGGCGCCCTCAGCACCCGCACCACCCACCCCTTCTACATGGCGCGCTTCGACGAGATCCTGGATGGTC TCGGCTTGCCGATCCGGCTTGAGAATCGCTACCGCTTCCAGACGAAGGGCGTGATGGCGAAGAACTGCGCCGACGCGGCG CTGCTCAATAAGGAAGCGCGGCACACGATGTCGTGCTCTTCGCCCGCCAAGGCGCGTTGGGCCAAGGATGAGGACGCCCG CCAGCCCAAACATTGCGGCCACTGTGTGCCCTGCCTGATCCGCCGGGCCGCGATGGTCGAAGGGCTCGGCGCCGACCACA CGCCCTACCAGATCCCGGATCTGCGGGCGAAGGTCCTCGACAGCGCCAAGGCCGAGGGCGCCCATGTGCGCGGCTTCCAG ATCGCCCTGTCGCGGCTCGCCAAGAAGCCTGCCCGAGCGAAGCTGGACATTCATCGACCCGGCCCCCTGACGGACCACCC GGGCGATCTCGCCGCCTACGAGAAGGTCTATGTCGACGGGCTGCAGGAGGTCGGACGCCTGCTGAAGGGTGTGCGGGCCC GGCCGCGATGA
Upstream 100 bases:
>100_bases AAGGGGTGGAACGGCTCGGCGACCGCGACGTCGAGCGCGTCGTCAACGAGATCTACGAAGCCGCCTTCGAGCTCGTGGCA GCCGCCGGGGAGGCCGCGCA
Downstream 100 bases:
>100_bases CGCTCCCGCAATCGGCGCGCCCGCGCCTGGTCGACTTCCACTGTCATCTCGACCTCTACCCGGACCATGCCGCGCTCATC CGTGAATGTGACCGCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MNHHSLVCRLGPGDTATVKPSRSDSKLTEVSFVDGDQRLGYGLGQALDQLRELGLRPSERTIDLALLAAALTAADTRISR STESQNAWTREIDLCLPVAEPKLWEGLAPLIVTTLNFLTGDRWGVRFRARPKGIAALAPAPTKLRTATADSVCLFSGGLD SFIGAIDLLADGKAPMLVSHYWDGITSTHQTYCADVIAKRFPKQRFHHLRARVGFPNDLVDGSAGENTLRGRSFLFFALA AMAADALGVGLIHVPENGLISLNVPLDPTRLGALSTRTTHPFYMARFDEILDGLGLPIRLENRYRFQTKGVMAKNCADAA LLNKEARHTMSCSSPAKARWAKDEDARQPKHCGHCVPCLIRRAAMVEGLGADHTPYQIPDLRAKVLDSAKAEGAHVRGFQ IALSRLAKKPARAKLDIHRPGPLTDHPGDLAAYEKVYVDGLQEVGRLLKGVRARPR
Sequences:
>Translated_456_residues MNHHSLVCRLGPGDTATVKPSRSDSKLTEVSFVDGDQRLGYGLGQALDQLRELGLRPSERTIDLALLAAALTAADTRISR STESQNAWTREIDLCLPVAEPKLWEGLAPLIVTTLNFLTGDRWGVRFRARPKGIAALAPAPTKLRTATADSVCLFSGGLD SFIGAIDLLADGKAPMLVSHYWDGITSTHQTYCADVIAKRFPKQRFHHLRARVGFPNDLVDGSAGENTLRGRSFLFFALA AMAADALGVGLIHVPENGLISLNVPLDPTRLGALSTRTTHPFYMARFDEILDGLGLPIRLENRYRFQTKGVMAKNCADAA LLNKEARHTMSCSSPAKARWAKDEDARQPKHCGHCVPCLIRRAAMVEGLGADHTPYQIPDLRAKVLDSAKAEGAHVRGFQ IALSRLAKKPARAKLDIHRPGPLTDHPGDLAAYEKVYVDGLQEVGRLLKGVRARPR >Mature_456_residues MNHHSLVCRLGPGDTATVKPSRSDSKLTEVSFVDGDQRLGYGLGQALDQLRELGLRPSERTIDLALLAAALTAADTRISR STESQNAWTREIDLCLPVAEPKLWEGLAPLIVTTLNFLTGDRWGVRFRARPKGIAALAPAPTKLRTATADSVCLFSGGLD SFIGAIDLLADGKAPMLVSHYWDGITSTHQTYCADVIAKRFPKQRFHHLRARVGFPNDLVDGSAGENTLRGRSFLFFALA AMAADALGVGLIHVPENGLISLNVPLDPTRLGALSTRTTHPFYMARFDEILDGLGLPIRLENRYRFQTKGVMAKNCADAA LLNKEARHTMSCSSPAKARWAKDEDARQPKHCGHCVPCLIRRAAMVEGLGADHTPYQIPDLRAKVLDSAKAEGAHVRGFQ IALSRLAKKPARAKLDIHRPGPLTDHPGDLAAYEKVYVDGLQEVGRLLKGVRARPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49717; Mature: 49717
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHHSLVCRLGPGDTATVKPSRSDSKLTEVSFVDGDQRLGYGLGQALDQLRELGLRPSER CCCCCEEEEECCCCCEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCH TIDLALLAAALTAADTRISRSTESQNAWTREIDLCLPVAEPKLWEGLAPLIVTTLNFLTG HHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEECCCCHHHHCHHHHHHHHHHHHCC DRWGVRFRARPKGIAALAPAPTKLRTATADSVCLFSGGLDSFIGAIDLLADGKAPMLVSH CCCCEEEEECCCCCEEECCCCCHHEECCCCCEEEECCCHHHHHHHHHHHCCCCCCEEHHH YWDGITSTHQTYCADVIAKRFPKQRFHHLRARVGFPNDLVDGSAGENTLRGRSFLFFALA HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHH AMAADALGVGLIHVPENGLISLNVPLDPTRLGALSTRTTHPFYMARFDEILDGLGLPIRL HHHHHHHCCCEEEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE ENRYRFQTKGVMAKNCADAALLNKEARHTMSCSSPAKARWAKDEDARQPKHCGHCVPCLI CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHCCCCHHCCCHHHHHH RRAAMVEGLGADHTPYQIPDLRAKVLDSAKAEGAHVRGFQIALSRLAKKPARAKLDIHRP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCC GPLTDHPGDLAAYEKVYVDGLQEVGRLLKGVRARPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNHHSLVCRLGPGDTATVKPSRSDSKLTEVSFVDGDQRLGYGLGQALDQLRELGLRPSER CCCCCEEEEECCCCCEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCH TIDLALLAAALTAADTRISRSTESQNAWTREIDLCLPVAEPKLWEGLAPLIVTTLNFLTG HHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEECCCCHHHHCHHHHHHHHHHHHCC DRWGVRFRARPKGIAALAPAPTKLRTATADSVCLFSGGLDSFIGAIDLLADGKAPMLVSH CCCCEEEEECCCCCEEECCCCCHHEECCCCCEEEECCCHHHHHHHHHHHCCCCCCEEHHH YWDGITSTHQTYCADVIAKRFPKQRFHHLRARVGFPNDLVDGSAGENTLRGRSFLFFALA HHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHH AMAADALGVGLIHVPENGLISLNVPLDPTRLGALSTRTTHPFYMARFDEILDGLGLPIRL HHHHHHHCCCEEEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE ENRYRFQTKGVMAKNCADAALLNKEARHTMSCSSPAKARWAKDEDARQPKHCGHCVPCLI CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHCCCCHHCCCHHHHHH RRAAMVEGLGADHTPYQIPDLRAKVLDSAKAEGAHVRGFQIALSRLAKKPARAKLDIHRP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCC GPLTDHPGDLAAYEKVYVDGLQEVGRLLKGVRARPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA