| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104887
Identifier: 197104887
GI number: 197104887
Start: 1612808
End: 1613674
Strand: Direct
Name: 197104887
Synonym: PHZ_c1422
Alternate gene names: NA
Gene position: 1612808-1613674 (Clockwise)
Preceding gene: 197104886
Following gene: 197104888
Centisome position: 40.36
GC content: 73.36
Gene sequence:
>867_bases ATGGGGACGTCGAAGGGCTATGGCGGGGCCGGTTCGGGGCTCGTCCCCTCCTGGGTCGACGACCCGTCTCCCGGCGTCGC GCCCGGACCCGCGCCGACGCCGCCGCCAGGCGGCGGAGCGCCCCAGCCGGGTCCCGGCCAAGCGCCGCCGCCACCGTCTC GGACGCCGCCGCGACCGGACACCTCCGGTGCGGGCTCCTTCCAGGGTGCTCGCGGCGCCTTCTCCCGTTTTGCCAAGACT GGCAGCCGCAGCGCGCTCGGCAGCGCGATGTCGAGCTATGTGCGCAGCGGGACCGGCGGCGCCCGTCGAGCCGCCCGCCG CATGGGGGCATCGCGAGCAGCGGGTGCGCGCCTCCTCGGAGTCGTCCGCGACGTCCAGCGCCTGGGTGCCGCCGAGACGC TGCGGCAGCTCAACCTGCCCGGCCTGGCCGGTCGCCCTGCCGCCGAAGTCTTCCTCGCCATCCTCGAGTTCATCTGCCCG CCGGGCGGCGCCGTGGACGAGGCCATCGCGCGTCAGGCCATGCTCGAGACGATCGGTGATCTGGCCGAGGCCGGCGTCGG CGACTTCGATGCGATGACGCCCGATCAGATGCAGGAGTTCTTCCTCGACTTCGTCGCACGCTCGATCGAAGGCCGCGTCA TGGCCGATCTCGGCGCCCGGGGGGTGACGCTGCCGGCGGATGTCGCCACCGTCGAGGCGGCGCAGCAGCAGCTCCACGAC TTCGTCACCGGCTGCACCCAGAGCGAACTCTCCGGTCGCCTGGAAGGGGTGGAACGGCTCGGCGACCGCGACGTCGAGCG CGTCGTCAACGAGATCTACGAAGCCGCCTTCGAGCTCGTGGCAGCCGCCGGGGAGGCCGCGCAATGA
Upstream 100 bases:
>100_bases GAATTCGCTCAGATCGCCGCCGGCTGGGCGGAGCAGTCCGAGAACGCCGTCCTCCAGGCCGCATCCAAGGGCGTTGCGAA GCTGAAGAGGACCTGAGGGC
Downstream 100 bases:
>100_bases ATCATCACAGCCTCGTCTGCCGGCTCGGCCCGGGCGATACCGCCACCGTCAAACCCTCACGATCCGACAGCAAGCTCACG GAGGTCTCGTTCGTCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MGTSKGYGGAGSGLVPSWVDDPSPGVAPGPAPTPPPGGGAPQPGPGQAPPPPSRTPPRPDTSGAGSFQGARGAFSRFAKT GSRSALGSAMSSYVRSGTGGARRAARRMGASRAAGARLLGVVRDVQRLGAAETLRQLNLPGLAGRPAAEVFLAILEFICP PGGAVDEAIARQAMLETIGDLAEAGVGDFDAMTPDQMQEFFLDFVARSIEGRVMADLGARGVTLPADVATVEAAQQQLHD FVTGCTQSELSGRLEGVERLGDRDVERVVNEIYEAAFELVAAAGEAAQ
Sequences:
>Translated_288_residues MGTSKGYGGAGSGLVPSWVDDPSPGVAPGPAPTPPPGGGAPQPGPGQAPPPPSRTPPRPDTSGAGSFQGARGAFSRFAKT GSRSALGSAMSSYVRSGTGGARRAARRMGASRAAGARLLGVVRDVQRLGAAETLRQLNLPGLAGRPAAEVFLAILEFICP PGGAVDEAIARQAMLETIGDLAEAGVGDFDAMTPDQMQEFFLDFVARSIEGRVMADLGARGVTLPADVATVEAAQQQLHD FVTGCTQSELSGRLEGVERLGDRDVERVVNEIYEAAFELVAAAGEAAQ >Mature_287_residues GTSKGYGGAGSGLVPSWVDDPSPGVAPGPAPTPPPGGGAPQPGPGQAPPPPSRTPPRPDTSGAGSFQGARGAFSRFAKTG SRSALGSAMSSYVRSGTGGARRAARRMGASRAAGARLLGVVRDVQRLGAAETLRQLNLPGLAGRPAAEVFLAILEFICPP GGAVDEAIARQAMLETIGDLAEAGVGDFDAMTPDQMQEFFLDFVARSIEGRVMADLGARGVTLPADVATVEAAQQQLHDF VTGCTQSELSGRLEGVERLGDRDVERVVNEIYEAAFELVAAAGEAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29379; Mature: 29248
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSKGYGGAGSGLVPSWVDDPSPGVAPGPAPTPPPGGGAPQPGPGQAPPPPSRTPPRPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGAGSFQGARGAFSRFAKTGSRSALGSAMSSYVRSGTGGARRAARRMGASRAAGARLLG CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHH VVRDVQRLGAAETLRQLNLPGLAGRPAAEVFLAILEFICPPGGAVDEAIARQAMLETIGD HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LAEAGVGDFDAMTPDQMQEFFLDFVARSIEGRVMADLGARGVTLPADVATVEAAQQQLHD HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FVTGCTQSELSGRLEGVERLGDRDVERVVNEIYEAAFELVAAAGEAAQ HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GTSKGYGGAGSGLVPSWVDDPSPGVAPGPAPTPPPGGGAPQPGPGQAPPPPSRTPPRPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGAGSFQGARGAFSRFAKTGSRSALGSAMSSYVRSGTGGARRAARRMGASRAAGARLLG CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHH VVRDVQRLGAAETLRQLNLPGLAGRPAAEVFLAILEFICPPGGAVDEAIARQAMLETIGD HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LAEAGVGDFDAMTPDQMQEFFLDFVARSIEGRVMADLGARGVTLPADVATVEAAQQQLHD HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH FVTGCTQSELSGRLEGVERLGDRDVERVVNEIYEAAFELVAAAGEAAQ HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA