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The map label for this gene is 197104824

Identifier: 197104824

GI number: 197104824

Start: 1539448

End: 1541139

Strand: Direct

Name: 197104824

Synonym: PHZ_c1358

Alternate gene names: NA

Gene position: 1539448-1541139 (Clockwise)

Preceding gene: 197104823

Following gene: 197104825

Centisome position: 38.52

GC content: 74.41

Gene sequence:

>1692_bases
ATGCGTCATCGCCTTCTCGCCTTCGCCGCCCCGCTGGTGCTCCTCGGGGCCTGCGCGACCACGCCGCCTGCCGACGACCT
GCCGGGCGTGCCCACCGCGGCGGCCGACACGGCCTACGGCATGTTCCTGGCGGGCAACGCCGCGCTGAACGAGGGGCGCA
GCGACGAGGCCGCCCGGTTCCTGGAGATGGCCCGCGCCCGCAGCGGCGACGAAGCCGCGGTGGCCGAGCGGGCGTTCACC
GCCGCCCTGCTGGCCGGTGACATCGACAAGGCCGCCGAGCTCGCCCCCGACGGGCCCGCCGCCTCCGAGCCCGCCAGGCG
CATGGGCCGGCTGGTGCAGGCCGTCGAGGCCATCGCCGACGGCAAGGGCCGGCTGGCCTACGAACAGCTTTCCGGCGAGG
CCATCGGCTTCCCGCACCGCGGCGCGGCGGCGCTGCTGGCGCCCTGGGCCGCCGCCCAGGCGGGCGACGTCGAGGCCTCC
CTGGTCCGCCCGCAGGTGCGGGGCGACCTCAGCGTCGACTTCTTCGGCCAGCTCGGCCAGGCCTATCTCTTCGAGCGCGC
CCGCCGCTTCGACGAGGCCGAGACCGACTTCAAGGCTGTGACCGCCGGGGAGACGCCGTCCGAGCTGACGGTGCTGGCCT
ATGGCGGCTTCCTCGAGCGCCGCGGCCGCCGGGCCGAGGCGGTGAAGCTGTACGACGCGGCGCTTCAGCGGACCCCCGGC
AGCCTGCAGCTCCAGGCGGCGCGCGAGCGGGCGGCCGCCGGCCGGTCCGCCCCCGCGGCCCCGACGGTGAAGGAAGGCGC
GGCTCTCGCGATGCTGGCGCCGGCGGCGACCATGATCGCGGCGCGTCAAGGCCAGATCGGCCTCGCCTACCTGCGGCTGG
CGCTGCGCCTCGATCCCGGCCGGAACGACGCCTGGTTGATGGTCGGCGACTTCCTGCAGAGCGGCGGCGACGTCGAGGGC
GCCCGCGCCGCCTATGCCCGGCCCAAGCCCGGGTCCCCGGAGTACGGCGCGGCCCAGGCCAAGCTCGCCTGGAGCTATCA
GAGCGAGGACCGGACGGAGACGGCGCTGAAACTCGCCCGGGCGGCCGCCGCGACGGGCGATCCCGACGCGCGCCTCACCC
TGTCGGACCTCCTGCGGGCCAACGGCGAATACGCCGAATCCGTCCAGTTGCTGGGCGAGCTGATCGCGGAGTCCGCCACG
CCGGACTGGCGCCTCTACTACGCCCGCGGCGCGGCCCTGGCGCAGATGGACCGCTGGAAGGACGCCGAGGCCGACCTGCA
GGCGGCGCTCAAGCTGCGGCCGGACGAGCCCGAGCTGCTGAACTTCCTGGGTTATTCCTGGATCGATCGCGGCGAGCGGC
TCGAGGAGGCCATGGCGATGGTCGAGAAGGCGGTCGCCTCCAACCCGCGCTCGGGGGCGATGATCGACAGCCTGGGGTGG
GCCCACTACCGGATGGGCGACTACAAGGCCGCCGTCGAGAAGCTGGAGCAGGCCGTCGAGCTCGAGGCCGGCGATCCCGA
GATCAACAACCACCTCGGCGACGCCTACTGGATGGCGGGGCGCAAGGACGAGGCGGTCTTCCAATGGCGGCGCGTCCTGA
CGCTGAAGCCGGACGCCAAGATCCAGGCCGACGCCGAGGCCAAGCTGGCCTCGGGCCTTGGGCCGCAGGCGCCGAAGCTC
GCCGGACAGTAG

Upstream 100 bases:

>100_bases
ATCGACTGGACCACGCCCCAGGGCGGGGACGGGCCGAATTACCCCAACATGTGACGCCGCCGCTCTTGCGGCCCCGGTCG
GGAGCCCCCAAGCTCCCGAC

Downstream 100 bases:

>100_bases
GGTGCCCGCCGTCTTCGCGCCGGCCAAGGTCAACCTCTTCCTGCACGTGGGCGCGCCGGAGCCCTCGGGCTACCACCCGA
TCTGCAGCCTGATGACGTTC

Product: TPR domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MRHRLLAFAAPLVLLGACATTPPADDLPGVPTAAADTAYGMFLAGNAALNEGRSDEAARFLEMARARSGDEAAVAERAFT
AALLAGDIDKAAELAPDGPAASEPARRMGRLVQAVEAIADGKGRLAYEQLSGEAIGFPHRGAAALLAPWAAAQAGDVEAS
LVRPQVRGDLSVDFFGQLGQAYLFERARRFDEAETDFKAVTAGETPSELTVLAYGGFLERRGRRAEAVKLYDAALQRTPG
SLQLQAARERAAAGRSAPAAPTVKEGAALAMLAPAATMIAARQGQIGLAYLRLALRLDPGRNDAWLMVGDFLQSGGDVEG
ARAAYARPKPGSPEYGAAQAKLAWSYQSEDRTETALKLARAAAATGDPDARLTLSDLLRANGEYAESVQLLGELIAESAT
PDWRLYYARGAALAQMDRWKDAEADLQAALKLRPDEPELLNFLGYSWIDRGERLEEAMAMVEKAVASNPRSGAMIDSLGW
AHYRMGDYKAAVEKLEQAVELEAGDPEINNHLGDAYWMAGRKDEAVFQWRRVLTLKPDAKIQADAEAKLASGLGPQAPKL
AGQ

Sequences:

>Translated_563_residues
MRHRLLAFAAPLVLLGACATTPPADDLPGVPTAAADTAYGMFLAGNAALNEGRSDEAARFLEMARARSGDEAAVAERAFT
AALLAGDIDKAAELAPDGPAASEPARRMGRLVQAVEAIADGKGRLAYEQLSGEAIGFPHRGAAALLAPWAAAQAGDVEAS
LVRPQVRGDLSVDFFGQLGQAYLFERARRFDEAETDFKAVTAGETPSELTVLAYGGFLERRGRRAEAVKLYDAALQRTPG
SLQLQAARERAAAGRSAPAAPTVKEGAALAMLAPAATMIAARQGQIGLAYLRLALRLDPGRNDAWLMVGDFLQSGGDVEG
ARAAYARPKPGSPEYGAAQAKLAWSYQSEDRTETALKLARAAAATGDPDARLTLSDLLRANGEYAESVQLLGELIAESAT
PDWRLYYARGAALAQMDRWKDAEADLQAALKLRPDEPELLNFLGYSWIDRGERLEEAMAMVEKAVASNPRSGAMIDSLGW
AHYRMGDYKAAVEKLEQAVELEAGDPEINNHLGDAYWMAGRKDEAVFQWRRVLTLKPDAKIQADAEAKLASGLGPQAPKL
AGQ
>Mature_563_residues
MRHRLLAFAAPLVLLGACATTPPADDLPGVPTAAADTAYGMFLAGNAALNEGRSDEAARFLEMARARSGDEAAVAERAFT
AALLAGDIDKAAELAPDGPAASEPARRMGRLVQAVEAIADGKGRLAYEQLSGEAIGFPHRGAAALLAPWAAAQAGDVEAS
LVRPQVRGDLSVDFFGQLGQAYLFERARRFDEAETDFKAVTAGETPSELTVLAYGGFLERRGRRAEAVKLYDAALQRTPG
SLQLQAARERAAAGRSAPAAPTVKEGAALAMLAPAATMIAARQGQIGLAYLRLALRLDPGRNDAWLMVGDFLQSGGDVEG
ARAAYARPKPGSPEYGAAQAKLAWSYQSEDRTETALKLARAAAATGDPDARLTLSDLLRANGEYAESVQLLGELIAESAT
PDWRLYYARGAALAQMDRWKDAEADLQAALKLRPDEPELLNFLGYSWIDRGERLEEAMAMVEKAVASNPRSGAMIDSLGW
AHYRMGDYKAAVEKLEQAVELEAGDPEINNHLGDAYWMAGRKDEAVFQWRRVLTLKPDAKIQADAEAKLASGLGPQAPKL
AGQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 59970; Mature: 59970

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHRLLAFAAPLVLLGACATTPPADDLPGVPTAAADTAYGMFLAGNAALNEGRSDEAARF
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEECCHHHCCCCCHHHHHH
LEMARARSGDEAAVAERAFTAALLAGDIDKAAELAPDGPAASEPARRMGRLVQAVEAIAD
HHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
GKGRLAYEQLSGEAIGFPHRGAAALLAPWAAAQAGDVEASLVRPQVRGDLSVDFFGQLGQ
CCCCEEHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCHHHCCCCCHHHHHHHHH
AYLFERARRFDEAETDFKAVTAGETPSELTVLAYGGFLERRGRRAEAVKLYDAALQRTPG
HHHHHHHHHCCHHCCCCEEEECCCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHCCCC
SLQLQAARERAAAGRSAPAAPTVKEGAALAMLAPAATMIAARQGQIGLAYLRLALRLDPG
CEEHHHHHHHHHCCCCCCCCCCHHCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHEECCC
RNDAWLMVGDFLQSGGDVEGARAAYARPKPGSPEYGAAQAKLAWSYQSEDRTETALKLAR
CCCCEEEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
AAAATGDPDARLTLSDLLRANGEYAESVQLLGELIAESATPDWRLYYARGAALAQMDRWK
HHHCCCCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCC
DAEADLQAALKLRPDEPELLNFLGYSWIDRGERLEEAMAMVEKAVASNPRSGAMIDSLGW
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
AHYRMGDYKAAVEKLEQAVELEAGDPEINNHLGDAYWMAGRKDEAVFQWRRVLTLKPDAK
HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHEECCCCHHHHHHHHHHEEECCCCC
IQADAEAKLASGLGPQAPKLAGQ
CCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRHRLLAFAAPLVLLGACATTPPADDLPGVPTAAADTAYGMFLAGNAALNEGRSDEAARF
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEECCHHHCCCCCHHHHHH
LEMARARSGDEAAVAERAFTAALLAGDIDKAAELAPDGPAASEPARRMGRLVQAVEAIAD
HHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
GKGRLAYEQLSGEAIGFPHRGAAALLAPWAAAQAGDVEASLVRPQVRGDLSVDFFGQLGQ
CCCCEEHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCHHHCCCCCHHHHHHHHH
AYLFERARRFDEAETDFKAVTAGETPSELTVLAYGGFLERRGRRAEAVKLYDAALQRTPG
HHHHHHHHHCCHHCCCCEEEECCCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHCCCC
SLQLQAARERAAAGRSAPAAPTVKEGAALAMLAPAATMIAARQGQIGLAYLRLALRLDPG
CEEHHHHHHHHHCCCCCCCCCCHHCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHEECCC
RNDAWLMVGDFLQSGGDVEGARAAYARPKPGSPEYGAAQAKLAWSYQSEDRTETALKLAR
CCCCEEEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
AAAATGDPDARLTLSDLLRANGEYAESVQLLGELIAESATPDWRLYYARGAALAQMDRWK
HHHCCCCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCC
DAEADLQAALKLRPDEPELLNFLGYSWIDRGERLEEAMAMVEKAVASNPRSGAMIDSLGW
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
AHYRMGDYKAAVEKLEQAVELEAGDPEINNHLGDAYWMAGRKDEAVFQWRRVLTLKPDAK
HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHEECCCCHHHHHHHHHHEEECCCCC
IQADAEAKLASGLGPQAPKLAGQ
CCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]