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The map label for this gene is ydiS [C]

Identifier: 197104823

GI number: 197104823

Start: 1537731

End: 1539401

Strand: Direct

Name: ydiS [C]

Synonym: PHZ_c1357

Alternate gene names: 197104823

Gene position: 1537731-1539401 (Clockwise)

Preceding gene: 197104819

Following gene: 197104824

Centisome position: 38.48

GC content: 67.32

Gene sequence:

>1671_bases
ATGAGCGAAGACGTCGAACGCGAGGCCATGGAGTACGACGTCGTCATCGTGGGCGCCGGGCCGTCGGGCCTGGCCGCCGC
GATCCGGCTCAAGCAACTCGCCGCCGAGGCGGGGACGGACGTTTCCGTCGCGGTGCTGGAGAAGGGCTCGGAAGTCGGCG
CCCACATCCTGTCGGGCGCGGTGATCGACCCCAAGGGGATCTCCGAGCTGCTGCCGAACTGGAAGGAGCTGGGCGCGCCG
CTCGAGACTCCGGTGACCAAGGACCAGTTCATCCTGCTGGGGCCGCAGGGCAGCCTGGACCTGCCGATGTGGGCGATGCC
GCCCTTCATGAACAACCACGGCAACTACATCGCCAGCCTGGGGAACGTCTGCCGCTGGCTCGCCCAGCAGGCGGAGGGCC
TGGGCGTCGAGGTCTACCCCGGCATGGCCGCCTCCGAGCCGGTGTTCGGCCCGAACGGCGAGCTGAGGGGCGTGGTGGCC
GGCGTGTTCGGCGTGACCAAGGACGGCCCCGGTCCCGACTACCAGCCCGGCGTCGAGGTGCTGGGCAAGTACGTCTTCAT
CGGCGAGGGCGTCCGCGGCTCGCTCGCCAAGGTGCTGAAGGCGAAGTACGGCCTCTGCAAGGACGCCGATCCCGAGAAGT
ACGGCATCGGCATCAAGGAGCTGTGGCAGGTTCCCGACGAGGTGTTCAAGCCGGGCCTGGCGGTCCACACCACGGGCTGG
CCGCTCGACAACCGCACCGGCGGCGGCAGCTTCATGTACCACTTCGGGGACAACTACATCGCCCTCGGCTACGTGGTGCA
CCTCAACTACAAGAACCCCTGGCTCTCGCCCTTCGACGAGTTCCAGCGCTGGAAGCACCATCCGGAAGTGGCCAAGCACC
TGGCCGGCGGCAAGCGCATCGCCTATGGCGCGCGCGCCATCAGCGAGGGCGGCCTGCAGTCGATCCCGAAGCTCTACTTC
CCGGGCGGCGTGCTGCTGGGCGATTCCGCCGGCTTCGTGAACGTCCCCCGCATCAAGGGCAGCCACAACGCCATGAAGAG
CGGGATGATGGCCGCCGAGGCCGCGTTCGCCGCCCTCCAGGCCGGCCGCTCGGGTGACGAGCTCGCCGAGTACAAGCAGG
CCTTCGACAGCTCCTGGGTGAAGAAGGAGCTGAACATCGTCCGCAACGCCAAGCCGATGCTGTCGAAGTTCGGCACCGCC
ATGGGCGGGGCGGTCGGCATGTTCGACATGTGGACCACCCACCTGCTGGGCGGCTTCTCGTTCTTCGGCACCCTGCGCCA
CGACAAGGGCGATCCGGAGTCCACGGGCCTGGCCAAGGACTACCAGCCGATCGTCTATCCGAAGCCGGACGGCGTCCTGT
CGTTCGACAAGCTGTCGTCGGTCTTCCTGTCGAACACCAACCACGACGAGAGCCAGCCGGCGCACCTGAAGCTGCGCGAT
CCCTCGGTGCCGATCGACGTGAACCTGCCGAAGTTCGGCGAGCCGGCGCGGCTTTACTGCCCGGCGGGGGTCTACGAGGT
GCTGTACGACGAGGCGGGCCAGAACCCGAAGTTCCAGATCAACTTCCAGAACTGCGTCCACTGCAAGACCTGCGACATCA
AGGATCCGTCGCAGAACATCGACTGGACCACGCCCCAGGGCGGGGACGGGCCGAATTACCCCAACATGTGA

Upstream 100 bases:

>100_bases
ACCCTTGGGTGACATCCCGATAAGACGCCGCGATACAAGGCGGCGGACAGGCGGGCGAGGGGACCCGGCCGCGCCGCGAG
GGGATGAGGAGCCAGGCGCC

Downstream 100 bases:

>100_bases
CGCCGCCGCTCTTGCGGCCCCGGTCGGGAGCCCCCAAGCTCCCGACATGCGTCATCGCCTTCTCGCCTTCGCCGCCCCGC
TGGTGCTCCTCGGGGCCTGC

Product: electrotransfer ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MSEDVEREAMEYDVVIVGAGPSGLAAAIRLKQLAAEAGTDVSVAVLEKGSEVGAHILSGAVIDPKGISELLPNWKELGAP
LETPVTKDQFILLGPQGSLDLPMWAMPPFMNNHGNYIASLGNVCRWLAQQAEGLGVEVYPGMAASEPVFGPNGELRGVVA
GVFGVTKDGPGPDYQPGVEVLGKYVFIGEGVRGSLAKVLKAKYGLCKDADPEKYGIGIKELWQVPDEVFKPGLAVHTTGW
PLDNRTGGGSFMYHFGDNYIALGYVVHLNYKNPWLSPFDEFQRWKHHPEVAKHLAGGKRIAYGARAISEGGLQSIPKLYF
PGGVLLGDSAGFVNVPRIKGSHNAMKSGMMAAEAAFAALQAGRSGDELAEYKQAFDSSWVKKELNIVRNAKPMLSKFGTA
MGGAVGMFDMWTTHLLGGFSFFGTLRHDKGDPESTGLAKDYQPIVYPKPDGVLSFDKLSSVFLSNTNHDESQPAHLKLRD
PSVPIDVNLPKFGEPARLYCPAGVYEVLYDEAGQNPKFQINFQNCVHCKTCDIKDPSQNIDWTTPQGGDGPNYPNM

Sequences:

>Translated_556_residues
MSEDVEREAMEYDVVIVGAGPSGLAAAIRLKQLAAEAGTDVSVAVLEKGSEVGAHILSGAVIDPKGISELLPNWKELGAP
LETPVTKDQFILLGPQGSLDLPMWAMPPFMNNHGNYIASLGNVCRWLAQQAEGLGVEVYPGMAASEPVFGPNGELRGVVA
GVFGVTKDGPGPDYQPGVEVLGKYVFIGEGVRGSLAKVLKAKYGLCKDADPEKYGIGIKELWQVPDEVFKPGLAVHTTGW
PLDNRTGGGSFMYHFGDNYIALGYVVHLNYKNPWLSPFDEFQRWKHHPEVAKHLAGGKRIAYGARAISEGGLQSIPKLYF
PGGVLLGDSAGFVNVPRIKGSHNAMKSGMMAAEAAFAALQAGRSGDELAEYKQAFDSSWVKKELNIVRNAKPMLSKFGTA
MGGAVGMFDMWTTHLLGGFSFFGTLRHDKGDPESTGLAKDYQPIVYPKPDGVLSFDKLSSVFLSNTNHDESQPAHLKLRD
PSVPIDVNLPKFGEPARLYCPAGVYEVLYDEAGQNPKFQINFQNCVHCKTCDIKDPSQNIDWTTPQGGDGPNYPNM
>Mature_555_residues
SEDVEREAMEYDVVIVGAGPSGLAAAIRLKQLAAEAGTDVSVAVLEKGSEVGAHILSGAVIDPKGISELLPNWKELGAPL
ETPVTKDQFILLGPQGSLDLPMWAMPPFMNNHGNYIASLGNVCRWLAQQAEGLGVEVYPGMAASEPVFGPNGELRGVVAG
VFGVTKDGPGPDYQPGVEVLGKYVFIGEGVRGSLAKVLKAKYGLCKDADPEKYGIGIKELWQVPDEVFKPGLAVHTTGWP
LDNRTGGGSFMYHFGDNYIALGYVVHLNYKNPWLSPFDEFQRWKHHPEVAKHLAGGKRIAYGARAISEGGLQSIPKLYFP
GGVLLGDSAGFVNVPRIKGSHNAMKSGMMAAEAAFAALQAGRSGDELAEYKQAFDSSWVKKELNIVRNAKPMLSKFGTAM
GGAVGMFDMWTTHLLGGFSFFGTLRHDKGDPESTGLAKDYQPIVYPKPDGVLSFDKLSSVFLSNTNHDESQPAHLKLRDP
SVPIDVNLPKFGEPARLYCPAGVYEVLYDEAGQNPKFQINFQNCVHCKTCDIKDPSQNIDWTTPQGGDGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=563, Percent_Identity=52.5754884547069, Blast_Score=567, Evalue=1e-162,
Organism=Escherichia coli, GI1787991, Length=407, Percent_Identity=28.5012285012285, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786227, Length=389, Percent_Identity=27.7634961439589, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI87082155, Length=378, Percent_Identity=26.984126984127, Blast_Score=89, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI25144720, Length=563, Percent_Identity=48.8454706927176, Blast_Score=521, Evalue=1e-148,
Organism=Saccharomyces cerevisiae, GI6324932, Length=579, Percent_Identity=45.0777202072539, Blast_Score=449, Evalue=1e-127,
Organism=Drosophila melanogaster, GI24652256, Length=566, Percent_Identity=52.6501766784452, Blast_Score=564, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60030; Mature: 59899

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDVEREAMEYDVVIVGAGPSGLAAAIRLKQLAAEAGTDVSVAVLEKGSEVGAHILSGA
CCCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCC
VIDPKGISELLPNWKELGAPLETPVTKDQFILLGPQGSLDLPMWAMPPFMNNHGNYIASL
EECCCCHHHHCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
GNVCRWLAQQAEGLGVEVYPGMAASEPVFGPNGELRGVVAGVFGVTKDGPGPDYQPGVEV
HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCHHH
LGKYVFIGEGVRGSLAKVLKAKYGLCKDADPEKYGIGIKELWQVPDEVFKPGLAVHTTGW
HCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCHHHHCCCEEEEECCC
PLDNRTGGGSFMYHFGDNYIALGYVVHLNYKNPWLSPFDEFQRWKHHPEVAKHLAGGKRI
CCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCEE
AYGARAISEGGLQSIPKLYFPGGVLLGDSAGFVNVPRIKGSHNAMKSGMMAAEAAFAALQ
EHHHHHHCCCCHHHCCCEECCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH
AGRSGDELAEYKQAFDSSWVKKELNIVRNAKPMLSKFGTAMGGAVGMFDMWTTHLLGGFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FFGTLRHDKGDPESTGLAKDYQPIVYPKPDGVLSFDKLSSVFLSNTNHDESQPAHLKLRD
HHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEEC
PSVPIDVNLPKFGEPARLYCPAGVYEVLYDEAGQNPKFQINFQNCVHCKTCDIKDPSQNI
CCCCEEECCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCC
DWTTPQGGDGPNYPNM
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEDVEREAMEYDVVIVGAGPSGLAAAIRLKQLAAEAGTDVSVAVLEKGSEVGAHILSGA
CCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCC
VIDPKGISELLPNWKELGAPLETPVTKDQFILLGPQGSLDLPMWAMPPFMNNHGNYIASL
EECCCCHHHHCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
GNVCRWLAQQAEGLGVEVYPGMAASEPVFGPNGELRGVVAGVFGVTKDGPGPDYQPGVEV
HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCHHH
LGKYVFIGEGVRGSLAKVLKAKYGLCKDADPEKYGIGIKELWQVPDEVFKPGLAVHTTGW
HCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCHHHHCCCEEEEECCC
PLDNRTGGGSFMYHFGDNYIALGYVVHLNYKNPWLSPFDEFQRWKHHPEVAKHLAGGKRI
CCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCEE
AYGARAISEGGLQSIPKLYFPGGVLLGDSAGFVNVPRIKGSHNAMKSGMMAAEAAFAALQ
EHHHHHHCCCCHHHCCCEECCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH
AGRSGDELAEYKQAFDSSWVKKELNIVRNAKPMLSKFGTAMGGAVGMFDMWTTHLLGGFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FFGTLRHDKGDPESTGLAKDYQPIVYPKPDGVLSFDKLSSVFLSNTNHDESQPAHLKLRD
HHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEEC
PSVPIDVNLPKFGEPARLYCPAGVYEVLYDEAGQNPKFQINFQNCVHCKTCDIKDPSQNI
CCCCEEECCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCC
DWTTPQGGDGPNYPNM
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]