Click here to switch to the map view.

The map label for this gene is msrB [H]

Identifier: 197104743

GI number: 197104743

Start: 1454045

End: 1454533

Strand: Reverse

Name: msrB [H]

Synonym: PHZ_c1277

Alternate gene names: 197104743

Gene position: 1454533-1454045 (Counterclockwise)

Preceding gene: 197104746

Following gene: 197104742

Centisome position: 36.4

GC content: 69.73

Gene sequence:

>489_bases
ATGAGCACGCCAGCGGTCTCCCCCTCCGGATTCGATCTCTCAGCCCCTAACGCAGAGGAACGCAAGCGGCTGGAAGCAGG
CCTCTCCCGCGAGCAGGCCGAGGTGCTGCTGCGCCACGGCACCGAGGCGCCCTTCTGCGGCGGCCTGCTCGATCAGAAGG
ACGACGGCGTCTACTGCTGCCGCCTCTGCGCCCTGCCCCTTTTCCGGCATCAGACCAAGTTCGAGAGCGGCACCGGCTGG
CCGTCCTTCTGGGCGCCGTACGACGAGGCGCATGTGAAGGGGGTGCGCGACACCTCCTACGGCATGGTCCGGATCGAGAC
GCGCTGCGCCCGCTGCGACAGCCACCAGGGCCACGTCTTCCCCGACGGGCCGCCGCCGACCCGCCTGCGGTACTGCATCA
ATTCCGTCTCGCTGGAGTTCGTGCCCACCGGCCAGCCGCTGCGCGATCCCCTGGGGCGCGGCGACAACGCGCACTTCGAA
AGCGCCTGA

Upstream 100 bases:

>100_bases
ATTCCGTCCCTTACGCCCTACAGCCCACAGGCCGCCAAAGGAGGCGCAATCGGCCTCCCGCGTCTTCCGCTCGCGAAGGG
GCGACCTTAGATTGGCGTCC

Downstream 100 bases:

>100_bases
GCCGCACGCGCCTGTGGATAGGCGGCCGGCTGCGACGATCCGCCCGCCAAGCGTGGCCATGACCGCGGGTCTATCGTCCG
TACGCCACAGCCGGACGCCC

Product: methionine sulfoxide reductase B

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSTPAVSPSGFDLSAPNAEERKRLEAGLSREQAEVLLRHGTEAPFCGGLLDQKDDGVYCCRLCALPLFRHQTKFESGTGW
PSFWAPYDEAHVKGVRDTSYGMVRIETRCARCDSHQGHVFPDGPPPTRLRYCINSVSLEFVPTGQPLRDPLGRGDNAHFE
SA

Sequences:

>Translated_162_residues
MSTPAVSPSGFDLSAPNAEERKRLEAGLSREQAEVLLRHGTEAPFCGGLLDQKDDGVYCCRLCALPLFRHQTKFESGTGW
PSFWAPYDEAHVKGVRDTSYGMVRIETRCARCDSHQGHVFPDGPPPTRLRYCINSVSLEFVPTGQPLRDPLGRGDNAHFE
SA
>Mature_161_residues
STPAVSPSGFDLSAPNAEERKRLEAGLSREQAEVLLRHGTEAPFCGGLLDQKDDGVYCCRLCALPLFRHQTKFESGTGWP
SFWAPYDEAHVKGVRDTSYGMVRIETRCARCDSHQGHVFPDGPPPTRLRYCINSVSLEFVPTGQPLRDPLGRGDNAHFES
A

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=122, Percent_Identity=45.9016393442623, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI301336162, Length=122, Percent_Identity=45.9016393442623, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI73089054, Length=122, Percent_Identity=45.9016393442623, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI37620216, Length=122, Percent_Identity=45.9016393442623, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI117606353, Length=129, Percent_Identity=45.7364341085271, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1788077, Length=128, Percent_Identity=54.6875, Blast_Score=145, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17553450, Length=127, Percent_Identity=40.9448818897638, Blast_Score=94, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115532676, Length=127, Percent_Identity=40.9448818897638, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319816, Length=120, Percent_Identity=36.6666666666667, Blast_Score=74, Evalue=1e-14,
Organism=Drosophila melanogaster, GI221378664, Length=133, Percent_Identity=45.1127819548872, Blast_Score=116, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24645799, Length=122, Percent_Identity=47.5409836065574, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI221378662, Length=140, Percent_Identity=42.8571428571429, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI45553335, Length=122, Percent_Identity=47.5409836065574, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21356369, Length=122, Percent_Identity=47.5409836065574, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24645801, Length=134, Percent_Identity=43.2835820895522, Blast_Score=110, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24645804, Length=133, Percent_Identity=43.609022556391, Blast_Score=109, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 17906; Mature: 17775

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPAVSPSGFDLSAPNAEERKRLEAGLSREQAEVLLRHGTEAPFCGGLLDQKDDGVYCC
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
RLCALPLFRHQTKFESGTGWPSFWAPYDEAHVKGVRDTSYGMVRIETRCARCDSHQGHVF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECHHHCCCCCCCCCC
PDGPPPTRLRYCINSVSLEFVPTGQPLRDPLGRGDNAHFESA
CCCCCHHHHHHHHHHCEEEEEECCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
STPAVSPSGFDLSAPNAEERKRLEAGLSREQAEVLLRHGTEAPFCGGLLDQKDDGVYCC
CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
RLCALPLFRHQTKFESGTGWPSFWAPYDEAHVKGVRDTSYGMVRIETRCARCDSHQGHVF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECHHHCCCCCCCCCC
PDGPPPTRLRYCINSVSLEFVPTGQPLRDPLGRGDNAHFESA
CCCCCHHHHHHHHHHCEEEEEECCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA