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The map label for this gene is 197104742

Identifier: 197104742

GI number: 197104742

Start: 1453144

End: 1453986

Strand: Reverse

Name: 197104742

Synonym: PHZ_c1276

Alternate gene names: NA

Gene position: 1453986-1453144 (Counterclockwise)

Preceding gene: 197104743

Following gene: 197104739

Centisome position: 36.38

GC content: 69.99

Gene sequence:

>843_bases
ATGACCGCGGGTCTATCGTCCGTACGCCACAGCCGGACGCCCCCGATGACTCTCTCGCCCGAACAAGCCCGCGCCCACGC
CGACGAGGTACGCGAAACCAGCGTCACCGTCCTCAAGGGGCTGATCCCCGCCGAGACCATCGACGCCTGGAACGAGGCGT
TCGGGCCGCTGCTCGCCGCCGCGGTCCGCCGCGAGGGGGACAATCCGAACCGCGGCGCCCACCGCTACTACGTCACCCTG
CCCTTGCAGGACCTTTGGGCCGATCCGGCGATCATCGACAACGACGCGGTCATGGCGGTCGTGGAGGAGCTGGTGGGGGC
CGATGGGGTGATGTGCCAGCTCGCCAGCGACACGCCGCTGGCCGGTTCCGAGCACCAGGAGCTGCACCGCGACACTCAAC
TGCTGTTCCCGGAGAGCGGCGCGGAGACCCCGCCCTACCAGCTGGCGGTCAACTTCCCGCTGGTGGATGTCACGGACGAG
AACGGGCCGATGGAGTACGCCCCCGGCACCCACATGCTGTCCAAGACCGAAGGCATGGCGAAGGTCGAGAGCGGCGAGAT
CCCGCTGGTGAAGGCTTACATGGCGCGCGGCGACGTGATGGTCCGCGACGTGCGGCACATCCATCGCGGGACGCCGAACC
GCACCGGAACGCCGCGGCCGATGGTGGTGATCGGCTACTCGCGCCGGTGGCTGCACCGGCCCGAGGTCAACGTCCGCATA
CCCGCCGAGGTGCTGGTCGCCCTTCCCGAGCGGGCGCGCCGCTGGCTGCGGCACAATCCCGTGTTCGAGACCAAGGCCGA
GGCCGCCCGGCCGGCCGAAACCTACCGGGCGTTCGCCTACTGA

Upstream 100 bases:

>100_bases
CCCCTGGGGCGCGGCGACAACGCGCACTTCGAAAGCGCCTGAGCCGCACGCGCCTGTGGATAGGCGGCCGGCTGCGACGA
TCCGCCCGCCAAGCGTGGCC

Downstream 100 bases:

>100_bases
CCGCCGGCGGGCTCAGGTCCGCCGGGTGGTGCTGCGGGTGGAGGCTGCATCCTCGCCGGACTTGCCGCCCGCCGTCGCGC
CCTCGTCCCGCATCTGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase PhyH Family Protein; Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTAGLSSVRHSRTPPMTLSPEQARAHADEVRETSVTVLKGLIPAETIDAWNEAFGPLLAAAVRREGDNPNRGAHRYYVTL
PLQDLWADPAIIDNDAVMAVVEELVGADGVMCQLASDTPLAGSEHQELHRDTQLLFPESGAETPPYQLAVNFPLVDVTDE
NGPMEYAPGTHMLSKTEGMAKVESGEIPLVKAYMARGDVMVRDVRHIHRGTPNRTGTPRPMVVIGYSRRWLHRPEVNVRI
PAEVLVALPERARRWLRHNPVFETKAEAARPAETYRAFAY

Sequences:

>Translated_280_residues
MTAGLSSVRHSRTPPMTLSPEQARAHADEVRETSVTVLKGLIPAETIDAWNEAFGPLLAAAVRREGDNPNRGAHRYYVTL
PLQDLWADPAIIDNDAVMAVVEELVGADGVMCQLASDTPLAGSEHQELHRDTQLLFPESGAETPPYQLAVNFPLVDVTDE
NGPMEYAPGTHMLSKTEGMAKVESGEIPLVKAYMARGDVMVRDVRHIHRGTPNRTGTPRPMVVIGYSRRWLHRPEVNVRI
PAEVLVALPERARRWLRHNPVFETKAEAARPAETYRAFAY
>Mature_279_residues
TAGLSSVRHSRTPPMTLSPEQARAHADEVRETSVTVLKGLIPAETIDAWNEAFGPLLAAAVRREGDNPNRGAHRYYVTLP
LQDLWADPAIIDNDAVMAVVEELVGADGVMCQLASDTPLAGSEHQELHRDTQLLFPESGAETPPYQLAVNFPLVDVTDEN
GPMEYAPGTHMLSKTEGMAKVESGEIPLVKAYMARGDVMVRDVRHIHRGTPNRTGTPRPMVVIGYSRRWLHRPEVNVRIP
AEVLVALPERARRWLRHNPVFETKAEAARPAETYRAFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31023; Mature: 30891

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGLSSVRHSRTPPMTLSPEQARAHADEVRETSVTVLKGLIPAETIDAWNEAFGPLLAA
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AVRREGDNPNRGAHRYYVTLPLQDLWADPAIIDNDAVMAVVEELVGADGVMCQLASDTPL
HHHHCCCCCCCCCEEEEEEEEHHHHCCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCC
AGSEHQELHRDTQLLFPESGAETPPYQLAVNFPLVDVTDENGPMEYAPGTHMLSKTEGMA
CCCHHHHHHHHHEEECCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCHHHHCCCCE
KVESGEIPLVKAYMARGDVMVRDVRHIHRGTPNRTGTPRPMVVIGYSRRWLHRPEVNVRI
EECCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEC
PAEVLVALPERARRWLRHNPVFETKAEAARPAETYRAFAY
HHHHHHHCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
TAGLSSVRHSRTPPMTLSPEQARAHADEVRETSVTVLKGLIPAETIDAWNEAFGPLLAA
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AVRREGDNPNRGAHRYYVTLPLQDLWADPAIIDNDAVMAVVEELVGADGVMCQLASDTPL
HHHHCCCCCCCCCEEEEEEEEHHHHCCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCC
AGSEHQELHRDTQLLFPESGAETPPYQLAVNFPLVDVTDENGPMEYAPGTHMLSKTEGMA
CCCHHHHHHHHHEEECCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCHHHHCCCCE
KVESGEIPLVKAYMARGDVMVRDVRHIHRGTPNRTGTPRPMVVIGYSRRWLHRPEVNVRI
EECCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEC
PAEVLVALPERARRWLRHNPVFETKAEAARPAETYRAFAY
HHHHHHHCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA