Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is exoM [H]

Identifier: 197104616

GI number: 197104616

Start: 1319550

End: 1320452

Strand: Reverse

Name: exoM [H]

Synonym: PHZ_c1150

Alternate gene names: 197104616

Gene position: 1320452-1319550 (Counterclockwise)

Preceding gene: 197104619

Following gene: 197104615

Centisome position: 33.04

GC content: 75.08

Gene sequence:

>903_bases
TTGGCCGCCACGACCGTCGACGTCGCCGTCTGCACCTACCGCCGCCCGGCCGTGGCCGAGACCCTGGCCTCGATCGCCCG
CCAGGCCCTGGCGCCGGACGTCCGCGTCCGCGTGATCGTCGCCGACAACGACGAACAGCCCGAGGCCCGCGCGCGGGTTC
TGGCCGCGGCGAAGGCGCTGGCACTGGAGGTGGCCTACGTGCATGCCCCCGCGCGCAACATCTCCCTGGCGCGCAACGCC
TGCCTCGAGGCGGCGGAGGCGCCCTTCCTCGCCTTCATCGACGACGACGAGACCGCCTCGGAAGGCTGGCTCGCCGCCCT
CCTCGCCGAGGCGGAGGCCGGCGGCTGGGATGCGGTGCTGGGGCCGGTCCGCGCGGTCTACGGCCCGCAGGCGCCGCCGT
GGATGGCGGCCGGCGACTTCCACTCCACGCGTCCGGTGCAGGCGGGCGGGCGGATCCTGAAGGGCTATGCCGGCAATGTG
CTCGTTCGGCGGGAGACGGTCGAGCGTCTTGGCCTCAGGTTCGATCTCGCGCTGGGCCGTCAGGGCGGCGAGGACGACGA
CTTCTTCTACCGGCTGACCGACGCCGGCGGGACGATCGGCTACGCCCCAGACGCCCTGGCCTTCGAACCGGTGCCCGAGC
AGCGGGCCTCGCTGAAGTGGCTGCTCAAGCGCAGCTTCCGCACCGGCCAGACCCATGGCTCGCGCCTGCGCCGTCGCTCT
CCGGGCGCCGCGGGGCGGCTGGTCCAGTCGGGCCTGGCGGCGGCCAAGGGAGGCGTGTGCCTGGCCGGCGCGGCGGCCAG
CGCCTTTTCTCCGGCCCGCCGCGGGCGCTGGCTGGTTCGGGGGGCGCTCCACGCCGGCGTCGTGGCCAGGCTCGCCGGCT
GGCGCGAGCTCCAACTCTACTGA

Upstream 100 bases:

>100_bases
TTCCGCCGTAGCCGGCGGGCCAGTGCAGCGATGGCGGAAACGTGATCGGGGAACCGGCCGCGCCCGGCGGCATTCCGGCG
GCGAAGCTTGGAGGGGAGCC

Downstream 100 bases:

>100_bases
TCCTGGCGGCGGCCGGGGAACGGCCGCGAGCCCCCGCGAGTTGATGGGCGCGGATGTGCGCCCGGCGCGCATTCGAAATC
GTCTGGTCGCGATTCCACGG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MAATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKALALEVAYVHAPARNISLARNA
CLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVLGPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNV
LVRRETVERLGLRFDLALGRQGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS
PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY

Sequences:

>Translated_300_residues
MAATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKALALEVAYVHAPARNISLARNA
CLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVLGPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNV
LVRRETVERLGLRFDLALGRQGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS
PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY
>Mature_299_residues
AATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKALALEVAYVHAPARNISLARNAC
LEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVLGPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNVL
VRRETVERLGLRFDLALGRQGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRSP
GAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY

Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 31889; Mature: 31757

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKAL
CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ALEVAYVHAPARNISLARNACLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVL
HHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHH
GPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNVLVRRETVERLGLRFDLALGR
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHCCEEEEEECC
QGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS
CCCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY
CCHHHHHHHHHHHHHCCCEEEECCCHHHCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
AATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKAL
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ALEVAYVHAPARNISLARNACLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVL
HHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHH
GPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNVLVRRETVERLGLRFDLALGR
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHCCEEEEEECC
QGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS
CCCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY
CCHHHHHHHHHHHHHCCCEEEECCCHHHCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8226645; 8246891; 11481431 [H]