| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is kdgK [H]
Identifier: 197104529
GI number: 197104529
Start: 1198728
End: 1199585
Strand: Direct
Name: kdgK [H]
Synonym: PHZ_c1063
Alternate gene names: 197104529
Gene position: 1198728-1199585 (Clockwise)
Preceding gene: 197104528
Following gene: 197104537
Centisome position: 30.0
GC content: 76.11
Gene sequence:
>858_bases ATGGTCGAGCTGAGCCTGGCCGGCGAGGGCCGGGCGCAGATCGCCTATGCCGGGGACACCTTCAACACCGCCGTCTACCT GAGCCGGCTGGGCCATGACGTGGCCTACGCCACGGTGCTGGGCGGGGACGACCCGTTCAGCCGCGGCGTGGCCGAGCTGA TGGCCGCCGAGGGCCTGGACGCGAGCCTGGCGGCGCGGGTGGAGGGCCGGCTGCCCGGGCTTTACGCCATCGAGCGGGAC GCGGCCGGCGAGCGGCGGTTCTTCTACTGGCGCGGCGAGGCGCCGGTGCGCCAGCTTCCCGAACTGGCCGACGGCGAGGC GCTGGCGCAGGCGACCCGCGCGGCGGACCTGACCTATCTGTCGGCCATCACCCTGGCGGTGGTGGGCGAGGCCGGCCGGA CGATGCTGGACGGCTTGCTGGCGGGAGCGAAGGCGGTCGGCTTCGACCTGAACTACCGCCCGCGCCTGTGGCCCGACGTG GAGACCGCCCGCGCGGCCATCGACCGGGCGGCGCTGGCGGCGCGCTACGTGTCGGCCAGCGCCGAGGACCTCGACGCCCT GGGCATGGGCGACGCCCCCGAGCGGTGGGCGAAGGCCGGCGCCGAGGTGCTGCACCGCGGGCACGACCATTCGCTGACCA TCCTGCGGCCGGGCGAGGCGCCGGTGCGGATCGCGCCGGGCGAGACGGTTAAGCCGGTGGACACGACGGGGGCGGGCGAC AGCTTCAACGCGGGCTACCTGGCCGCGCGGCTGGACGGCGCAGGCCCCGAGGCCGCCACTGCGGCGGGGCGGACGCTGGC CGGCGTGGTGGTCCGGCACGTGGGCGCGATCATCCCGCGCGAGGCGATGCCCCAGTAG
Upstream 100 bases:
>100_bases CGGCTGGTCGAGCGGCTTTCGAAGCACGCGGGGCTGACCTTCACCGTCGAAGCAGCCTAAGAGACCGCCCATGGCACGCA TCGTCGCCGTGGGCGAAGTC
Downstream 100 bases:
>100_bases ATGCCCCAGTGGTGGATGAGGCCGCCCGACGCAGCCGGACGGCCCCTCTGTTCGACACGCCTAAGGCCAAAAGTCCCTCA AACTGGATCCGGCGACGAAC
Product: 2-dehydro-3-deoxygluconokinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MVELSLAGEGRAQIAYAGDTFNTAVYLSRLGHDVAYATVLGGDDPFSRGVAELMAAEGLDASLAARVEGRLPGLYAIERD AAGERRFFYWRGEAPVRQLPELADGEALAQATRAADLTYLSAITLAVVGEAGRTMLDGLLAGAKAVGFDLNYRPRLWPDV ETARAAIDRAALAARYVSASAEDLDALGMGDAPERWAKAGAEVLHRGHDHSLTILRPGEAPVRIAPGETVKPVDTTGAGD SFNAGYLAARLDGAGPEAATAAGRTLAGVVVRHVGAIIPREAMPQ
Sequences:
>Translated_285_residues MVELSLAGEGRAQIAYAGDTFNTAVYLSRLGHDVAYATVLGGDDPFSRGVAELMAAEGLDASLAARVEGRLPGLYAIERD AAGERRFFYWRGEAPVRQLPELADGEALAQATRAADLTYLSAITLAVVGEAGRTMLDGLLAGAKAVGFDLNYRPRLWPDV ETARAAIDRAALAARYVSASAEDLDALGMGDAPERWAKAGAEVLHRGHDHSLTILRPGEAPVRIAPGETVKPVDTTGAGD SFNAGYLAARLDGAGPEAATAAGRTLAGVVVRHVGAIIPREAMPQ >Mature_285_residues MVELSLAGEGRAQIAYAGDTFNTAVYLSRLGHDVAYATVLGGDDPFSRGVAELMAAEGLDASLAARVEGRLPGLYAIERD AAGERRFFYWRGEAPVRQLPELADGEALAQATRAADLTYLSAITLAVVGEAGRTMLDGLLAGAKAVGFDLNYRPRLWPDV ETARAAIDRAALAARYVSASAEDLDALGMGDAPERWAKAGAEVLHRGHDHSLTILRPGEAPVRIAPGETVKPVDTTGAGD SFNAGYLAARLDGAGPEAATAAGRTLAGVVVRHVGAIIPREAMPQ
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=302, Percent_Identity=39.7350993377483, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 29773; Mature: 29773
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELSLAGEGRAQIAYAGDTFNTAVYLSRLGHDVAYATVLGGDDPFSRGVAELMAAEGLD CEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCC ASLAARVEGRLPGLYAIERDAAGERRFFYWRGEAPVRQLPELADGEALAQATRAADLTYL HHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHH SAITLAVVGEAGRTMLDGLLAGAKAVGFDLNYRPRLWPDVETARAAIDRAALAARYVSAS HHHHHHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC AEDLDALGMGDAPERWAKAGAEVLHRGHDHSLTILRPGEAPVRIAPGETVKPVDTTGAGD HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCC SFNAGYLAARLDGAGPEAATAAGRTLAGVVVRHVGAIIPREAMPQ CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MVELSLAGEGRAQIAYAGDTFNTAVYLSRLGHDVAYATVLGGDDPFSRGVAELMAAEGLD CEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCC ASLAARVEGRLPGLYAIERDAAGERRFFYWRGEAPVRQLPELADGEALAQATRAADLTYL HHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHH SAITLAVVGEAGRTMLDGLLAGAKAVGFDLNYRPRLWPDVETARAAIDRAALAARYVSAS HHHHHHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC AEDLDALGMGDAPERWAKAGAEVLHRGHDHSLTILRPGEAPVRIAPGETVKPVDTTGAGD HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCC SFNAGYLAARLDGAGPEAATAAGRTLAGVVVRHVGAIIPREAMPQ CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157608 [H]