| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104528
Identifier: 197104528
GI number: 197104528
Start: 1197530
End: 1198687
Strand: Direct
Name: 197104528
Synonym: PHZ_c1062
Alternate gene names: NA
Gene position: 1197530-1198687 (Clockwise)
Preceding gene: 197104521
Following gene: 197104529
Centisome position: 29.97
GC content: 71.76
Gene sequence:
>1158_bases ATGAACCCCAACGCCGAGTTCGACCTGATCGTCTACGGCGCCACCGGCTACACCGGGCGGCTGGTGGCCGAGCACCTGGC GCAGCGCTACGGCGTCGGCGGCGAGGTGAAGTGGGCCATGGCCGGGCGCTCGGCCGAGAAGCTGGAGGCGGTGCGGGACG AGATCGGCGCGCCGAAGGAGACGCCGCTGGTGGTCTGCGACGCCGCCGATCCGGCGCAGGTCCGGCAGATGGTGCGGCGG GCCAAGGCGGTGATCACGACGGTCGGGCCCTACCAGCTCTACGGCTCGGACCTGGTGGCGGCCTGCGCCGAGGCCGGGAC CGACTACCTGGACCTGTGCGGCGAGCCCAACTGGATGCGCCGGATGATCGACGCCCACGACGCCAGGGCGAAGGAGACGG GCGCCCGGATCCTGTTCTCGTGCGGCTTCGATTCCATCCCGTTCGAGCTGGGCGTCTACTTCACCCAACAGGCGGCGAAG AAGGCCCTCGGCGGGCCGGTCCCGCGGGTGAAGGGCCGGGTGCGCGGCATGAAGGGCGGCCTGTCGGGCGGCACGGCGGC CAGCGGCAAGGCCACCATGGAGGCGCTGCAGAAGGACCCCTCGCAACTGGCGGTGATGATGAGCGACTACGGGCTCACGC CGGGCTTCGAGGGGCCGGCCGCGCCGCCCTCGAACGCGCCCTACGACGACCCGGACGTGGGACCGGTGGCGCCGTTCATG ATGGCGGTGATCAACGTGAAGAACGTGCACCGCTCGAATCTCCTGATGGGTCACGCCTACGGGACCGACTTCGCCTACGA CGAGATGGTGATGGGCGGGCCCAGTGGCGGGCCCGGCTTCACCGACCTGGGCTCGCTGCCCGGCGGCGGCCCGAAGCCCG GCGAGGGGCCGACCAAGGAGGAGCGGGAGACCGGCTTCTTCGACGTGCTGTTCGTCGGCGCGGCGGCGGACGGGCGGCAG GTTCGCGCCTCGGTCAAGGGCGACAAGGACCCCGGCTACGGCTCGACGTCCAAGATGCTGGCCGAGACGGCGATCGCCCT GGTGAACGCCCCCGACGTGGCGGGCGGGATCTGGACGCCGGGCGCGGCGCTGCAGGACCGGCTGGTCGAGCGGCTTTCGA AGCACGCGGGGCTGACCTTCACCGTCGAAGCAGCCTAA
Upstream 100 bases:
>100_bases CGATGATTCCCAGCTCGGTCACGCCCGGACCTTAAGCGAGCGGTTGCTAGGACGCTGTAAATTCGTGATGGTCGCGCCTC ACGCACGAGGGAGAGCGTCC
Downstream 100 bases:
>100_bases GAGACCGCCCATGGCACGCATCGTCGCCGTGGGCGAAGTCATGGTCGAGCTGAGCCTGGCCGGCGAGGGCCGGGCGCAGA TCGCCTATGCCGGGGACACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKETPLVVCDAADPAQVRQMVRR AKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMRRMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAK KALGGPVPRVKGRVRGMKGGLSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKEERETGFFDVLFVGAAADGRQ VRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTPGAALQDRLVERLSKHAGLTFTVEAA
Sequences:
>Translated_385_residues MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKETPLVVCDAADPAQVRQMVRR AKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMRRMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAK KALGGPVPRVKGRVRGMKGGLSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKEERETGFFDVLFVGAAADGRQ VRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTPGAALQDRLVERLSKHAGLTFTVEAA >Mature_385_residues MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKETPLVVCDAADPAQVRQMVRR AKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMRRMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAK KALGGPVPRVKGRVRGMKGGLSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKEERETGFFDVLFVGAAADGRQ VRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTPGAALQDRLVERLSKHAGLTFTVEAA
Specific function: Unknown
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI55770836, Length=167, Percent_Identity=37.125748502994, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17560066, Length=431, Percent_Identity=26.9141531322506, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI32567112, Length=180, Percent_Identity=37.2222222222222, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71991033, Length=172, Percent_Identity=35.4651162790698, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24646278, Length=439, Percent_Identity=28.7015945330296, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24644140, Length=157, Percent_Identity=37.5796178343949, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24644142, Length=157, Percent_Identity=37.5796178343949, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI21356081, Length=157, Percent_Identity=37.5796178343949, Blast_Score=124, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR005097 [H]
Pfam domain/function: PF03435 Saccharop_dh [H]
EC number: NA
Molecular weight: Translated: 40332; Mature: 40332
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKE CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCC TPLVVCDAADPAQVRQMVRRAKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMR CCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH RMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAKKALGGPVPRVKGRVRGMKGG HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC LSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM CCCCCCCCCHHHHHHHHCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKE HHHHHHHHHHHHCEEEEECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH ERETGFFDVLFVGAAADGRQVRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTP HHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GAALQDRLVERLSKHAGLTFTVEAA CHHHHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKE CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCC TPLVVCDAADPAQVRQMVRRAKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMR CCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH RMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAKKALGGPVPRVKGRVRGMKGG HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC LSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM CCCCCCCCCHHHHHHHHCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKE HHHHHHHHHHHHCEEEEECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH ERETGFFDVLFVGAAADGRQVRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTP HHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GAALQDRLVERLSKHAGLTFTVEAA CHHHHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]