Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104528

Identifier: 197104528

GI number: 197104528

Start: 1197530

End: 1198687

Strand: Direct

Name: 197104528

Synonym: PHZ_c1062

Alternate gene names: NA

Gene position: 1197530-1198687 (Clockwise)

Preceding gene: 197104521

Following gene: 197104529

Centisome position: 29.97

GC content: 71.76

Gene sequence:

>1158_bases
ATGAACCCCAACGCCGAGTTCGACCTGATCGTCTACGGCGCCACCGGCTACACCGGGCGGCTGGTGGCCGAGCACCTGGC
GCAGCGCTACGGCGTCGGCGGCGAGGTGAAGTGGGCCATGGCCGGGCGCTCGGCCGAGAAGCTGGAGGCGGTGCGGGACG
AGATCGGCGCGCCGAAGGAGACGCCGCTGGTGGTCTGCGACGCCGCCGATCCGGCGCAGGTCCGGCAGATGGTGCGGCGG
GCCAAGGCGGTGATCACGACGGTCGGGCCCTACCAGCTCTACGGCTCGGACCTGGTGGCGGCCTGCGCCGAGGCCGGGAC
CGACTACCTGGACCTGTGCGGCGAGCCCAACTGGATGCGCCGGATGATCGACGCCCACGACGCCAGGGCGAAGGAGACGG
GCGCCCGGATCCTGTTCTCGTGCGGCTTCGATTCCATCCCGTTCGAGCTGGGCGTCTACTTCACCCAACAGGCGGCGAAG
AAGGCCCTCGGCGGGCCGGTCCCGCGGGTGAAGGGCCGGGTGCGCGGCATGAAGGGCGGCCTGTCGGGCGGCACGGCGGC
CAGCGGCAAGGCCACCATGGAGGCGCTGCAGAAGGACCCCTCGCAACTGGCGGTGATGATGAGCGACTACGGGCTCACGC
CGGGCTTCGAGGGGCCGGCCGCGCCGCCCTCGAACGCGCCCTACGACGACCCGGACGTGGGACCGGTGGCGCCGTTCATG
ATGGCGGTGATCAACGTGAAGAACGTGCACCGCTCGAATCTCCTGATGGGTCACGCCTACGGGACCGACTTCGCCTACGA
CGAGATGGTGATGGGCGGGCCCAGTGGCGGGCCCGGCTTCACCGACCTGGGCTCGCTGCCCGGCGGCGGCCCGAAGCCCG
GCGAGGGGCCGACCAAGGAGGAGCGGGAGACCGGCTTCTTCGACGTGCTGTTCGTCGGCGCGGCGGCGGACGGGCGGCAG
GTTCGCGCCTCGGTCAAGGGCGACAAGGACCCCGGCTACGGCTCGACGTCCAAGATGCTGGCCGAGACGGCGATCGCCCT
GGTGAACGCCCCCGACGTGGCGGGCGGGATCTGGACGCCGGGCGCGGCGCTGCAGGACCGGCTGGTCGAGCGGCTTTCGA
AGCACGCGGGGCTGACCTTCACCGTCGAAGCAGCCTAA

Upstream 100 bases:

>100_bases
CGATGATTCCCAGCTCGGTCACGCCCGGACCTTAAGCGAGCGGTTGCTAGGACGCTGTAAATTCGTGATGGTCGCGCCTC
ACGCACGAGGGAGAGCGTCC

Downstream 100 bases:

>100_bases
GAGACCGCCCATGGCACGCATCGTCGCCGTGGGCGAAGTCATGGTCGAGCTGAGCCTGGCCGGCGAGGGCCGGGCGCAGA
TCGCCTATGCCGGGGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKETPLVVCDAADPAQVRQMVRR
AKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMRRMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAK
KALGGPVPRVKGRVRGMKGGLSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM
MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKEERETGFFDVLFVGAAADGRQ
VRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTPGAALQDRLVERLSKHAGLTFTVEAA

Sequences:

>Translated_385_residues
MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKETPLVVCDAADPAQVRQMVRR
AKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMRRMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAK
KALGGPVPRVKGRVRGMKGGLSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM
MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKEERETGFFDVLFVGAAADGRQ
VRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTPGAALQDRLVERLSKHAGLTFTVEAA
>Mature_385_residues
MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKETPLVVCDAADPAQVRQMVRR
AKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMRRMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAK
KALGGPVPRVKGRVRGMKGGLSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM
MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKEERETGFFDVLFVGAAADGRQ
VRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTPGAALQDRLVERLSKHAGLTFTVEAA

Specific function: Unknown

COG id: COG3268

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI55770836, Length=167, Percent_Identity=37.125748502994, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17560066, Length=431, Percent_Identity=26.9141531322506, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI32567112, Length=180, Percent_Identity=37.2222222222222, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71991033, Length=172, Percent_Identity=35.4651162790698, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24646278, Length=439, Percent_Identity=28.7015945330296, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24644140, Length=157, Percent_Identity=37.5796178343949, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24644142, Length=157, Percent_Identity=37.5796178343949, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI21356081, Length=157, Percent_Identity=37.5796178343949, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR005097 [H]

Pfam domain/function: PF03435 Saccharop_dh [H]

EC number: NA

Molecular weight: Translated: 40332; Mature: 40332

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKE
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCC
TPLVVCDAADPAQVRQMVRRAKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMR
CCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
RMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAKKALGGPVPRVKGRVRGMKGG
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
LSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM
CCCCCCCCCHHHHHHHHCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKE
HHHHHHHHHHHHCEEEEECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ERETGFFDVLFVGAAADGRQVRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTP
HHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GAALQDRLVERLSKHAGLTFTVEAA
CHHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MNPNAEFDLIVYGATGYTGRLVAEHLAQRYGVGGEVKWAMAGRSAEKLEAVRDEIGAPKE
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCC
TPLVVCDAADPAQVRQMVRRAKAVITTVGPYQLYGSDLVAACAEAGTDYLDLCGEPNWMR
CCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
RMIDAHDARAKETGARILFSCGFDSIPFELGVYFTQQAAKKALGGPVPRVKGRVRGMKGG
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
LSGGTAASGKATMEALQKDPSQLAVMMSDYGLTPGFEGPAAPPSNAPYDDPDVGPVAPFM
CCCCCCCCCHHHHHHHHCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MAVINVKNVHRSNLLMGHAYGTDFAYDEMVMGGPSGGPGFTDLGSLPGGGPKPGEGPTKE
HHHHHHHHHHHHCEEEEECCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ERETGFFDVLFVGAAADGRQVRASVKGDKDPGYGSTSKMLAETAIALVNAPDVAGGIWTP
HHHCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
GAALQDRLVERLSKHAGLTFTVEAA
CHHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]