| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104192
Identifier: 197104192
GI number: 197104192
Start: 796975
End: 798177
Strand: Reverse
Name: 197104192
Synonym: PHZ_c0726
Alternate gene names: NA
Gene position: 798177-796975 (Counterclockwise)
Preceding gene: 197104193
Following gene: 197104190
Centisome position: 19.97
GC content: 68.91
Gene sequence:
>1203_bases ATGATCAGGACGCTTGCGAGCGCCGCCGCGCTTGGCATGGGGCTGCTGGCCGCAGGCGCGGCGCAGGCCCAGACCGCTCA GGCCGCTCAGGCCGCCGAGCCGGCCCGCACCGACTACGCCGACAAGGCCAACTGGCTGTGCTTCCCCGGCAAGGCGAACG ACGCCTGCGCGGTGGACCTGACCACGACGGTGATCAAGGCGGACGGGTCGAGCACCATCGAGACCTTCAAGGCCGATCCG AAGGCCCCCATCGACTGCTTCTACGTCTATCCGACGGTCTCGACCGATCCGGGCGTGACCTCGGACCTGAAGGCCGACCC CGCCGAGCTCAACGTCGTGAAGCAGCAGCTCGCCCGCTTCGGTTCGAAGTGCCGCATCTATGCGCCGATGTACCGGCAGT TCACCCTGGCGGCCCTGCGCTCGATGATGCTGGGCCAGCCCTTGCCGGGCTCCACCGATCCCTCCGCCCGCCAGGTCGGC TACCAGGACGTGGTGGACGCCTGGAACCACTACCTGACGCACGAGAACAAGGGCCGCGGCGTCGTGCTGATCGGCCATTC GCAGGGCTCGGGCGTGCTCCAGCGGATGATCCCCGCCGAGGTCGAGGGCAAGCCCGTCCAGAAGCAGCTCGTCTCGGCGC TGATCCTGGGCTCGAACCTGCCGGTCGAGGCCGGCAAGGACGTCGGCCAGTTCAAGACCATCCCGCTCTGCAAGTCGGCG AGCCAGACCGGCTGCGCGATCAGCTTCGTGACCTTCCGCGCGGACGCCCCGCCGCCCGCCGGCAGCCGCTTCGGCAAGGT CCCGCAGCCGGGCATGGAAGCCGCCTGCACCAACCCCGCCGCCCTGGGCGGCGGCACGGGCGAGCTGAAGGCCTATCTGT CGAACAACGCCAACATCGCCGCCGCCTCCCAGCCGACGCCCGAGTGGGTGAAGGGCAAGTCCAACCCAGAAACGCCCTTC GTGGCCCTGCCTGGCCTGATCACCGGCGAGTGCGTATCGAAGGACGGCTTCAACTACCTCTCGGCGAAGATCCACGCCGA TCCGGCCGATCCGCGCACCGACGTGATCAACGGCGACGTGGTCAACGGCGGGCAGGTCCTGGCCGACTGGGGCCTGCACC TGATCGACGTGAACATCGCCATGGGCAACCTGGTGGACGTCGTCGGTCAGCAGTCCAAGGCCTACCTGGCCAAGGCCCGC TAA
Upstream 100 bases:
>100_bases GCACCGCCCGGGTGCGGGTGGCCTAAGGCCGCTGGACGGCGGCCCTCCGCGCCGCCATCATCAAACCCGGTTTTCGAAAA ACGACCGGGGAGGACTTCCG
Downstream 100 bases:
>100_bases CGCGAAGCGCCCGCCCTCCGGCCGGAGGGCGGGCGCGCCGTCTTCGGAACGTGTCGCGTCGCTAGCGCGTCAACTTGCGC CCGGCCATCAGGCCCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MIRTLASAAALGMGLLAAGAAQAQTAQAAQAAEPARTDYADKANWLCFPGKANDACAVDLTTTVIKADGSSTIETFKADP KAPIDCFYVYPTVSTDPGVTSDLKADPAELNVVKQQLARFGSKCRIYAPMYRQFTLAALRSMMLGQPLPGSTDPSARQVG YQDVVDAWNHYLTHENKGRGVVLIGHSQGSGVLQRMIPAEVEGKPVQKQLVSALILGSNLPVEAGKDVGQFKTIPLCKSA SQTGCAISFVTFRADAPPPAGSRFGKVPQPGMEAACTNPAALGGGTGELKAYLSNNANIAAASQPTPEWVKGKSNPETPF VALPGLITGECVSKDGFNYLSAKIHADPADPRTDVINGDVVNGGQVLADWGLHLIDVNIAMGNLVDVVGQQSKAYLAKAR
Sequences:
>Translated_400_residues MIRTLASAAALGMGLLAAGAAQAQTAQAAQAAEPARTDYADKANWLCFPGKANDACAVDLTTTVIKADGSSTIETFKADP KAPIDCFYVYPTVSTDPGVTSDLKADPAELNVVKQQLARFGSKCRIYAPMYRQFTLAALRSMMLGQPLPGSTDPSARQVG YQDVVDAWNHYLTHENKGRGVVLIGHSQGSGVLQRMIPAEVEGKPVQKQLVSALILGSNLPVEAGKDVGQFKTIPLCKSA SQTGCAISFVTFRADAPPPAGSRFGKVPQPGMEAACTNPAALGGGTGELKAYLSNNANIAAASQPTPEWVKGKSNPETPF VALPGLITGECVSKDGFNYLSAKIHADPADPRTDVINGDVVNGGQVLADWGLHLIDVNIAMGNLVDVVGQQSKAYLAKAR >Mature_400_residues MIRTLASAAALGMGLLAAGAAQAQTAQAAQAAEPARTDYADKANWLCFPGKANDACAVDLTTTVIKADGSSTIETFKADP KAPIDCFYVYPTVSTDPGVTSDLKADPAELNVVKQQLARFGSKCRIYAPMYRQFTLAALRSMMLGQPLPGSTDPSARQVG YQDVVDAWNHYLTHENKGRGVVLIGHSQGSGVLQRMIPAEVEGKPVQKQLVSALILGSNLPVEAGKDVGQFKTIPLCKSA SQTGCAISFVTFRADAPPPAGSRFGKVPQPGMEAACTNPAALGGGTGELKAYLSNNANIAAASQPTPEWVKGKSNPETPF VALPGLITGECVSKDGFNYLSAKIHADPADPRTDVINGDVVNGGQVLADWGLHLIDVNIAMGNLVDVVGQQSKAYLAKAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41852; Mature: 41852
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTLASAAALGMGLLAAGAAQAQTAQAAQAAEPARTDYADKANWLCFPGKANDACAVDL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEE TTTVIKADGSSTIETFKADPKAPIDCFYVYPTVSTDPGVTSDLKADPAELNVVKQQLARF EEEEEECCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH GSKCRIYAPMYRQFTLAALRSMMLGQPLPGSTDPSARQVGYQDVVDAWNHYLTHENKGRG CCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCE VVLIGHSQGSGVLQRMIPAEVEGKPVQKQLVSALILGSNLPVEAGKDVGQFKTIPLCKSA EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC SQTGCAISFVTFRADAPPPAGSRFGKVPQPGMEAACTNPAALGGGTGELKAYLSNNANIA CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHEEEEECCCCCEE AASQPTPEWVKGKSNPETPFVALPGLITGECVSKDGFNYLSAKIHADPADPRTDVINGDV ECCCCCHHHHCCCCCCCCCEEECCCCEECCHHCCCCCCEEEEEEECCCCCCCCCCCCCCE VNGGQVLADWGLHLIDVNIAMGNLVDVVGQQSKAYLAKAR ECCCEEEECCCEEEEEEEEHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MIRTLASAAALGMGLLAAGAAQAQTAQAAQAAEPARTDYADKANWLCFPGKANDACAVDL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEE TTTVIKADGSSTIETFKADPKAPIDCFYVYPTVSTDPGVTSDLKADPAELNVVKQQLARF EEEEEECCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH GSKCRIYAPMYRQFTLAALRSMMLGQPLPGSTDPSARQVGYQDVVDAWNHYLTHENKGRG CCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCE VVLIGHSQGSGVLQRMIPAEVEGKPVQKQLVSALILGSNLPVEAGKDVGQFKTIPLCKSA EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC SQTGCAISFVTFRADAPPPAGSRFGKVPQPGMEAACTNPAALGGGTGELKAYLSNNANIA CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHEEEEECCCCCEE AASQPTPEWVKGKSNPETPFVALPGLITGECVSKDGFNYLSAKIHADPADPRTDVINGDV ECCCCCHHHHCCCCCCCCCEEECCCCEECCHHCCCCCCEEEEEEECCCCCCCCCCCCCCE VNGGQVLADWGLHLIDVNIAMGNLVDVVGQQSKAYLAKAR ECCCEEEECCCEEEEEEEEHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA