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The map label for this gene is glcD [H]

Identifier: 197104149

GI number: 197104149

Start: 740650

End: 742017

Strand: Reverse

Name: glcD [H]

Synonym: PHZ_c0683

Alternate gene names: 197104149

Gene position: 742017-740650 (Counterclockwise)

Preceding gene: 197104164

Following gene: 197104148

Centisome position: 18.57

GC content: 75.0

Gene sequence:

>1368_bases
ATGCCCGATCTCGTCCGACGCCTGGAAACCTTCCTGCCCCCCGCCGACCTCCTGACCGGCCCGGCCGCCGCCGAGGCGGC
GTTCAGCTTCTGGGGCTCGCTGGGAACGCCGCTCGCGGTGGCCCGACCGCGGACCCCGGAGCAGGTCGCCGACGTCGTGC
GGGCCGCGGCCGAAGCGGGCGTTCCGGTCGTGCCCTGGGGCGGGCGCACGGGCCTGGCGGGCGGGGCCTACGCGGAGGGC
GCCCTGGCGCTGAGCCTGGAGCGCCTGGACGCCGTCGAGGAGATCGACGCCGACGAGTCGCTGATGGTGGTGCAGGCCGG
CTGCCCCCTGGCCAAGGCCTGCGACGCGGTTGAAGCGGCCGGCCTCTTCCTGCCCCTGGACCTCGGCGCGCGGGGCTCGG
CCACGATCGGCGGCATGGTCTCGACCAACGCCGGGGGCAACCGCGTGCTGCGCTACGGCATGACCCGCGACCAGGTGCTG
GGGCTCGAGGTGGTGCTGCCCGACGGGACGCTCGTGCCCGGCCTCAACCGCCTGCTGAAGAACAACACCGGCTACGACCT
CAAGCAGCTGTTCATCGGGGCCGAGGGCACGCTCGGCGTCGTGACCCGGGCGGTGCTGCGCCTGCGCCCGCGCCCGGCCG
CGCGGGGAACCGCCTTCCTGGCCGTGGACAGCTTCGAGGCCCTGCCGAAGCTGCTCCGGCGGCTCGACGCCGACCTCGGC
GGGCTGCTGTCCGCCTTCGAGGTGATGTGGCCCGGCTTCTACGAGCTGGTCACTACGCCCCCGGCGCAGGGCCGCCCGCC
CGTGCCCGCGGGCCATGCGTTCTATGTCCTCGCCGAGATGCTGGGCGGCGATCCCGAGCACGACCCGGCCCGCTTCGAGG
CCGCCCTGACCGGGCTGCTGGAGGAGGGGCTGATCGCCGACGCGGCCATCGCCCGGTCCCACGCCGAGGCCGAGCGGATG
TGGGCGCTGCGCGACGACGTCATGCAGACCGGCCGCTTCGGCCCGCCGGCGGCGTTCGACGTCAGCCTGCCGATCCGTCA
CATGCCAGCCTATGTGGAGGGCGTGCGCGCGGAGCTCGCCGCCCGCTGGCCGGACTCGCCGCTGTGGGTGTTCGGACACC
TGGGCGACGGCAACCTGCACCTGATCGTGGGCGCGGTCCCCGCGGACGCCCACGCCGAGATCGACCGGATCGTCCACGAG
CCGCTCGCGCCCCTGGGCGGGTCGGTGTCGGCCGAGCACGGCATCGGCCTGCGCAAGCGCGAGCTGCTGGGCCTGTCCCG
CGCCCCGGCCGAGATCGCCCTGATGCGCACCCTGAAGGGCGCGCTCGATCCGCGCGGCCAGCTCAACCCCGGCAAGATCG
TCGGCTGA

Upstream 100 bases:

>100_bases
CGGGGCGCCTGGGCAGGCAAGGACCCCGTACAGGCCGGCGATTGACATCCGTCATGCGACCGGCCGGCCGACGCCTCCAC
ACTCCGCGACGGAGACCCGC

Downstream 100 bases:

>100_bases
CCGCCGCCGCCCGGGGGCTTGATGTCGGACAACCGCGATCGCCCGCGGCCGCGGTAGTCAGGCTGGGCAACTGGGAGCCC
CTTCCGTGACCGCGACCCTG

Product: FAD/FMN-containing dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MPDLVRRLETFLPPADLLTGPAAAEAAFSFWGSLGTPLAVARPRTPEQVADVVRAAAEAGVPVVPWGGRTGLAGGAYAEG
ALALSLERLDAVEEIDADESLMVVQAGCPLAKACDAVEAAGLFLPLDLGARGSATIGGMVSTNAGGNRVLRYGMTRDQVL
GLEVVLPDGTLVPGLNRLLKNNTGYDLKQLFIGAEGTLGVVTRAVLRLRPRPAARGTAFLAVDSFEALPKLLRRLDADLG
GLLSAFEVMWPGFYELVTTPPAQGRPPVPAGHAFYVLAEMLGGDPEHDPARFEAALTGLLEEGLIADAAIARSHAEAERM
WALRDDVMQTGRFGPPAAFDVSLPIRHMPAYVEGVRAELAARWPDSPLWVFGHLGDGNLHLIVGAVPADAHAEIDRIVHE
PLAPLGGSVSAEHGIGLRKRELLGLSRAPAEIALMRTLKGALDPRGQLNPGKIVG

Sequences:

>Translated_455_residues
MPDLVRRLETFLPPADLLTGPAAAEAAFSFWGSLGTPLAVARPRTPEQVADVVRAAAEAGVPVVPWGGRTGLAGGAYAEG
ALALSLERLDAVEEIDADESLMVVQAGCPLAKACDAVEAAGLFLPLDLGARGSATIGGMVSTNAGGNRVLRYGMTRDQVL
GLEVVLPDGTLVPGLNRLLKNNTGYDLKQLFIGAEGTLGVVTRAVLRLRPRPAARGTAFLAVDSFEALPKLLRRLDADLG
GLLSAFEVMWPGFYELVTTPPAQGRPPVPAGHAFYVLAEMLGGDPEHDPARFEAALTGLLEEGLIADAAIARSHAEAERM
WALRDDVMQTGRFGPPAAFDVSLPIRHMPAYVEGVRAELAARWPDSPLWVFGHLGDGNLHLIVGAVPADAHAEIDRIVHE
PLAPLGGSVSAEHGIGLRKRELLGLSRAPAEIALMRTLKGALDPRGQLNPGKIVG
>Mature_454_residues
PDLVRRLETFLPPADLLTGPAAAEAAFSFWGSLGTPLAVARPRTPEQVADVVRAAAEAGVPVVPWGGRTGLAGGAYAEGA
LALSLERLDAVEEIDADESLMVVQAGCPLAKACDAVEAAGLFLPLDLGARGSATIGGMVSTNAGGNRVLRYGMTRDQVLG
LEVVLPDGTLVPGLNRLLKNNTGYDLKQLFIGAEGTLGVVTRAVLRLRPRPAARGTAFLAVDSFEALPKLLRRLDADLGG
LLSAFEVMWPGFYELVTTPPAQGRPPVPAGHAFYVLAEMLGGDPEHDPARFEAALTGLLEEGLIADAAIARSHAEAERMW
ALRDDVMQTGRFGPPAAFDVSLPIRHMPAYVEGVRAELAARWPDSPLWVFGHLGDGNLHLIVGAVPADAHAEIDRIVHEP
LAPLGGSVSAEHGIGLRKRELLGLSRAPAEIALMRTLKGALDPRGQLNPGKIVG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=453, Percent_Identity=40.3973509933775, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI37595756, Length=434, Percent_Identity=32.4884792626728, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI37595754, Length=457, Percent_Identity=30.8533916849015, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI4501993, Length=206, Percent_Identity=25.7281553398058, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1789351, Length=428, Percent_Identity=30.3738317757009, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1787977, Length=512, Percent_Identity=27.5390625, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI48994907, Length=455, Percent_Identity=23.956043956044, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI48994914, Length=141, Percent_Identity=32.6241134751773, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17534361, Length=428, Percent_Identity=32.9439252336449, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI71992373, Length=436, Percent_Identity=30.2752293577982, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI71992381, Length=435, Percent_Identity=29.1954022988506, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71992392, Length=357, Percent_Identity=31.6526610644258, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17556096, Length=452, Percent_Identity=21.9026548672566, Blast_Score=81, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=467, Percent_Identity=36.4025695931477, Blast_Score=305, Evalue=1e-83,
Organism=Saccharomyces cerevisiae, GI6320764, Length=423, Percent_Identity=35.2245862884161, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6320027, Length=438, Percent_Identity=27.8538812785388, Blast_Score=156, Evalue=7e-39,
Organism=Drosophila melanogaster, GI18921117, Length=430, Percent_Identity=35.3488372093023, Blast_Score=241, Evalue=9e-64,
Organism=Drosophila melanogaster, GI24639277, Length=430, Percent_Identity=35.3488372093023, Blast_Score=241, Evalue=9e-64,
Organism=Drosophila melanogaster, GI24639275, Length=430, Percent_Identity=35.3488372093023, Blast_Score=241, Evalue=9e-64,
Organism=Drosophila melanogaster, GI24653753, Length=195, Percent_Identity=28.7179487179487, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 47844; Mature: 47712

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLVRRLETFLPPADLLTGPAAAEAAFSFWGSLGTPLAVARPRTPEQVADVVRAAAEAG
CCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCC
VPVVPWGGRTGLAGGAYAEGALALSLERLDAVEEIDADESLMVVQAGCPLAKACDAVEAA
CCEECCCCCCCCCCCCCCCCHHEEEHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
GLFLPLDLGARGSATIGGMVSTNAGGNRVLRYGMTRDQVLGLEVVLPDGTLVPGLNRLLK
CEEEEECCCCCCCCCCCCEEECCCCCCCEEEECCCHHHEEEEEEECCCCCCCHHHHHHHH
NNTGYDLKQLFIGAEGTLGVVTRAVLRLRPRPAARGTAFLAVDSFEALPKLLRRLDADLG
CCCCCCHHHHEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCHHH
GLLSAFEVMWPGFYELVTTPPAQGRPPVPAGHAFYVLAEMLGGDPEHDPARFEAALTGLL
HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EEGLIADAAIARSHAEAERMWALRDDVMQTGRFGPPAAFDVSLPIRHMPAYVEGVRAELA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
ARWPDSPLWVFGHLGDGNLHLIVGAVPADAHAEIDRIVHEPLAPLGGSVSAEHGIGLRKR
HCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHH
ELLGLSRAPAEIALMRTLKGALDPRGQLNPGKIVG
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PDLVRRLETFLPPADLLTGPAAAEAAFSFWGSLGTPLAVARPRTPEQVADVVRAAAEAG
CHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCC
VPVVPWGGRTGLAGGAYAEGALALSLERLDAVEEIDADESLMVVQAGCPLAKACDAVEAA
CCEECCCCCCCCCCCCCCCCHHEEEHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC
GLFLPLDLGARGSATIGGMVSTNAGGNRVLRYGMTRDQVLGLEVVLPDGTLVPGLNRLLK
CEEEEECCCCCCCCCCCCEEECCCCCCCEEEECCCHHHEEEEEEECCCCCCCHHHHHHHH
NNTGYDLKQLFIGAEGTLGVVTRAVLRLRPRPAARGTAFLAVDSFEALPKLLRRLDADLG
CCCCCCHHHHEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCHHH
GLLSAFEVMWPGFYELVTTPPAQGRPPVPAGHAFYVLAEMLGGDPEHDPARFEAALTGLL
HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EEGLIADAAIARSHAEAERMWALRDDVMQTGRFGPPAAFDVSLPIRHMPAYVEGVRAELA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
ARWPDSPLWVFGHLGDGNLHLIVGAVPADAHAEIDRIVHEPLAPLGGSVSAEHGIGLRKR
HCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHH
ELLGLSRAPAEIALMRTLKGALDPRGQLNPGKIVG
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]