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The map label for this gene is lpsE [H]

Identifier: 197104079

GI number: 197104079

Start: 657742

End: 658770

Strand: Reverse

Name: lpsE [H]

Synonym: PHZ_c0613

Alternate gene names: 197104079

Gene position: 658770-657742 (Counterclockwise)

Preceding gene: 197104081

Following gene: 197104078

Centisome position: 16.48

GC content: 75.51

Gene sequence:

>1029_bases
ATGAGCGTCCTCCATCTCCTGGGAACGGCCGGCGACGGCGGGGCCGAGACCTACTTCGTCGACCTGGTGGAGGCGCTGGG
CCGGGCGGGGGTCCCGCAGGCCGCGGCCATCCGCCGCCATCCCGGCCGCGAGGCCCGCCTGAAGGCCGCCGGCGTGCCGG
TGCGCACCCTGCCCTTCGGCGGGCCCATCGACATCGTCACCCGCACCGCCGCCGCCGGCTTCGCCAAGGTGCAGGGGGCG
AAGGTGGCGCTGGCCTGGATGAACCGCGCCGCGCGCCATACGCCCCGCGGGCCCTGGGCGCGGATCGGCCGGCTCGGCGG
CTACTACAGCCTCAAGTATTACCGGGGCTTCGACCACCTGGTGGCCAACACCGAGGACATCGCCGACTGGATCGTGGCCC
AGGGCTGGCCCGCCGGGAAGGTGAGCTGGATCCCCAACTTCGCCGCCGCCCCGCCCGACGTCCCGGCGCTGGACCGCGCC
GCCCTGGGCACGCCGGCCGACGCGCCGCTGCTGCTCGGCATGGGCCGGCTGCACGAGTCCAAGGCCCATGACGTCTCGCT
GCAGGCGCTGGCCAAGCTGCCGGACGCCTGGCTGTGGATCGCCGGCGCCGGCCCCCTGGAGACCAGGCTGCAGGGCCTGG
CCACGGCCCTCGGCGTGCAGGACCGCGTCCGGTTCCTCGGCTGGCGCGCCGACGCCTCGGCGCTCTACCGGGCGGCGGAC
GTCTGCGTCTTCCCCTCGCGCTACGAGCCGCTGGGCAATGTGGTGATCCAGGCATGGGCCCACGGCCTGCCGGTCGTCGC
CGCCGAGAGCCAGGGGCCCAAGGCCCTGATCCGGCACGGCAAGGACGGCCTGCTGGTCCCCGTGGACGATCCGGACGCCC
TGGCCGAGGCCGTGCGCCGGGTGCTGGCCGAGCCGGTCCTGGCCTCGCGCATGACGCGCGCGGGCGAGAAGCGCGTCGCC
GCCAGCTTCTCGGAGGCCGCCGTGGTCGCCCGCTGGAAGGCCCTCTTCGCCGACTTCGGGGAAGGCTGA

Upstream 100 bases:

>100_bases
CCAGCCACGGTCGCTCGCGCGAGGTGGGGCTTATAGGGGTTCGTTTCGGCGGCTTCAAGCGCTTGGGCGAAGGCCGTTCA
ACGGCTAGGGTCGGCGCGCG

Downstream 100 bases:

>100_bases
TGTGCGGTATAGCCGGCCAGCTCGGCGGCGATCCGGCCGCGGCCGGGCCGATGATCCGCGCCCTCGCCCACCGCGGCCCC
GACGGCGTGCGCGAGGAGGC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSVLHLLGTAGDGGAETYFVDLVEALGRAGVPQAAAIRRHPGREARLKAAGVPVRTLPFGGPIDIVTRTAAAGFAKVQGA
KVALAWMNRAARHTPRGPWARIGRLGGYYSLKYYRGFDHLVANTEDIADWIVAQGWPAGKVSWIPNFAAAPPDVPALDRA
ALGTPADAPLLLGMGRLHESKAHDVSLQALAKLPDAWLWIAGAGPLETRLQGLATALGVQDRVRFLGWRADASALYRAAD
VCVFPSRYEPLGNVVIQAWAHGLPVVAAESQGPKALIRHGKDGLLVPVDDPDALAEAVRRVLAEPVLASRMTRAGEKRVA
ASFSEAAVVARWKALFADFGEG

Sequences:

>Translated_342_residues
MSVLHLLGTAGDGGAETYFVDLVEALGRAGVPQAAAIRRHPGREARLKAAGVPVRTLPFGGPIDIVTRTAAAGFAKVQGA
KVALAWMNRAARHTPRGPWARIGRLGGYYSLKYYRGFDHLVANTEDIADWIVAQGWPAGKVSWIPNFAAAPPDVPALDRA
ALGTPADAPLLLGMGRLHESKAHDVSLQALAKLPDAWLWIAGAGPLETRLQGLATALGVQDRVRFLGWRADASALYRAAD
VCVFPSRYEPLGNVVIQAWAHGLPVVAAESQGPKALIRHGKDGLLVPVDDPDALAEAVRRVLAEPVLASRMTRAGEKRVA
ASFSEAAVVARWKALFADFGEG
>Mature_341_residues
SVLHLLGTAGDGGAETYFVDLVEALGRAGVPQAAAIRRHPGREARLKAAGVPVRTLPFGGPIDIVTRTAAAGFAKVQGAK
VALAWMNRAARHTPRGPWARIGRLGGYYSLKYYRGFDHLVANTEDIADWIVAQGWPAGKVSWIPNFAAAPPDVPALDRAA
LGTPADAPLLLGMGRLHESKAHDVSLQALAKLPDAWLWIAGAGPLETRLQGLATALGVQDRVRFLGWRADASALYRAADV
CVFPSRYEPLGNVVIQAWAHGLPVVAAESQGPKALIRHGKDGLLVPVDDPDALAEAVRRVLAEPVLASRMTRAGEKRVAA
SFSEAAVVARWKALFADFGEG

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 36307; Mature: 36176

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLHLLGTAGDGGAETYFVDLVEALGRAGVPQAAAIRRHPGREARLKAAGVPVRTLPFG
CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHEEEECCCCEEECCCC
GPIDIVTRTAAAGFAKVQGAKVALAWMNRAARHTPRGPWARIGRLGGYYSLKYYRGFDHL
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEECCHHHH
VANTEDIADWIVAQGWPAGKVSWIPNFAAAPPDVPALDRAALGTPADAPLLLGMGRLHES
HCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCC
KAHDVSLQALAKLPDAWLWIAGAGPLETRLQGLATALGVQDRVRFLGWRADASALYRAAD
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VCVFPSRYEPLGNVVIQAWAHGLPVVAAESQGPKALIRHGKDGLLVPVDDPDALAEAVRR
EEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEECCCHHHHHHHHHH
VLAEPVLASRMTRAGEKRVAASFSEAAVVARWKALFADFGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVLHLLGTAGDGGAETYFVDLVEALGRAGVPQAAAIRRHPGREARLKAAGVPVRTLPFG
CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHEEEECCCCEEECCCC
GPIDIVTRTAAAGFAKVQGAKVALAWMNRAARHTPRGPWARIGRLGGYYSLKYYRGFDHL
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEECCHHHH
VANTEDIADWIVAQGWPAGKVSWIPNFAAAPPDVPALDRAALGTPADAPLLLGMGRLHES
HCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCC
KAHDVSLQALAKLPDAWLWIAGAGPLETRLQGLATALGVQDRVRFLGWRADASALYRAAD
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VCVFPSRYEPLGNVVIQAWAHGLPVVAAESQGPKALIRHGKDGLLVPVDDPDALAEAVRR
EEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEECCCHHHHHHHHHH
VLAEPVLASRMTRAGEKRVAASFSEAAVVARWKALFADFGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]