| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103982
Identifier: 197103982
GI number: 197103982
Start: 542430
End: 543113
Strand: Direct
Name: 197103982
Synonym: PHZ_c0516
Alternate gene names: NA
Gene position: 542430-543113 (Clockwise)
Preceding gene: 197103976
Following gene: 197103990
Centisome position: 13.57
GC content: 66.96
Gene sequence:
>684_bases ATGACGGACGCGCCCGCCAAGGCTCCCTTCGACCTGTCGACGCCTCTCGGGCGGGCGAGGACCTATCTGGACTACCTCTG GAACGACCACGCCTACCTGCGGCTGGGCTTCTCCAACGCCCACTGGATCTCGGAGGAGCTGGTGCGGGCGAACCAGCCGT GGCCGCACCAGCTGGCCGCCTGGAAGGCGCGCGGGATCAAGACGATCATCAACCTGCGCGGCGGGTTCGACGCCAGCTTC CACGCGCTGGAAAAGGACGCCTGCCAGCGCCTGGGGCTGACGATGGTGGACTTCACCATCACCTCGCGCGAGGTGCCCAG CGTCCAGCGCGTGCTGGGCGCCAAGCGGCTGTTCGAGACCATCGAATATCCGGCCATGATGCACTGCAAGTCCGGCGCGG ACCGGGCGGGCATCATGAGCGTGCTCTACATGCACTTCCGGAAGGGCAAGACCATCCGCGAGGCCATGGACCAGCTGCAC CTGCGCTACCTGCACGTGAAGCAGGGCAAGACCGGCGTGCTGGACTACACCTTCGAGCGCTACCTCGAGGAGGGCGAGCC CGCCGGCATGAGCTTCCTCGAGTGGGTGCAGAGCCCGATGTACGATCCCGCCGGCATGAAGGCGACGTTCCGCGCCCAGA TGCTGGGATCGCTGATCACCGAGCGCCTGCTCCGCCGCGAATAG
Upstream 100 bases:
>100_bases GAGGCGTCGGACGTTGCGGAAGCGAAGTCAAGCGGCGGCAGGCCCCCTGCGACGCCCGGCCCGGCTTCCGGTTTGGCGGG GATCGCCCTACTTAGGCGCC
Downstream 100 bases:
>100_bases CCGGCCCGTCCGCCCCCCGGGAGCTGTCGCCTTTGTGACAGACAACCGGGGCTGCGACATGCGAAGGTACGGTATGGACG ACGGCCACACCCTCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Tyrosine/Serine Protein Phosphatase; Tyrosine/Serine Phosphatase
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTDAPAKAPFDLSTPLGRARTYLDYLWNDHAYLRLGFSNAHWISEELVRANQPWPHQLAAWKARGIKTIINLRGGFDASF HALEKDACQRLGLTMVDFTITSREVPSVQRVLGAKRLFETIEYPAMMHCKSGADRAGIMSVLYMHFRKGKTIREAMDQLH LRYLHVKQGKTGVLDYTFERYLEEGEPAGMSFLEWVQSPMYDPAGMKATFRAQMLGSLITERLLRRE
Sequences:
>Translated_227_residues MTDAPAKAPFDLSTPLGRARTYLDYLWNDHAYLRLGFSNAHWISEELVRANQPWPHQLAAWKARGIKTIINLRGGFDASF HALEKDACQRLGLTMVDFTITSREVPSVQRVLGAKRLFETIEYPAMMHCKSGADRAGIMSVLYMHFRKGKTIREAMDQLH LRYLHVKQGKTGVLDYTFERYLEEGEPAGMSFLEWVQSPMYDPAGMKATFRAQMLGSLITERLLRRE >Mature_226_residues TDAPAKAPFDLSTPLGRARTYLDYLWNDHAYLRLGFSNAHWISEELVRANQPWPHQLAAWKARGIKTIINLRGGFDASFH ALEKDACQRLGLTMVDFTITSREVPSVQRVLGAKRLFETIEYPAMMHCKSGADRAGIMSVLYMHFRKGKTIREAMDQLHL RYLHVKQGKTGVLDYTFERYLEEGEPAGMSFLEWVQSPMYDPAGMKATFRAQMLGSLITERLLRRE
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26028; Mature: 25897
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAPAKAPFDLSTPLGRARTYLDYLWNDHAYLRLGFSNAHWISEELVRANQPWPHQLAA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHH WKARGIKTIINLRGGFDASFHALEKDACQRLGLTMVDFTITSREVPSVQRVLGAKRLFET HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH IEYPAMMHCKSGADRAGIMSVLYMHFRKGKTIREAMDQLHLRYLHVKQGKTGVLDYTFER HCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YLEEGEPAGMSFLEWVQSPMYDPAGMKATFRAQMLGSLITERLLRRE HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDAPAKAPFDLSTPLGRARTYLDYLWNDHAYLRLGFSNAHWISEELVRANQPWPHQLAA CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHH WKARGIKTIINLRGGFDASFHALEKDACQRLGLTMVDFTITSREVPSVQRVLGAKRLFET HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH IEYPAMMHCKSGADRAGIMSVLYMHFRKGKTIREAMDQLHLRYLHVKQGKTGVLDYTFER HCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH YLEEGEPAGMSFLEWVQSPMYDPAGMKATFRAQMLGSLITERLLRRE HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA