| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103976
Identifier: 197103976
GI number: 197103976
Start: 535502
End: 536584
Strand: Direct
Name: 197103976
Synonym: PHZ_c0510
Alternate gene names: NA
Gene position: 535502-536584 (Clockwise)
Preceding gene: 197103974
Following gene: 197103982
Centisome position: 13.4
GC content: 68.33
Gene sequence:
>1083_bases ATGGCCGTCACCGCCGACGTCGCCGCCGAGCAGGAGCGGGAGAAGGCCAACACCGGCACCGAGGCCGTCCCCGAGGCCCA GCGCTTCGACCAGGCTTCGCTGGAGCGCTGGCTGGAGGCCAACGTCGAGGGCTACGCCGGCCCGCTGGAGGTCCGCAAGT TCAAGGGCGGCCAGTCGAATCCGACCTATCAGCTCATCACGCCCTCACAGAAGTACGTCCTGCGCCGCAAGCCGCCGGGC AAGCTGCTGCCCTCGGCCCACGCCGTGGACCGGGAGTACCGGGTGATCTCGGCGCTGTACCCGACGGGCTTCCCGGTCGC GCGCACCTACGGCCTGTGCCAGGACGATTCCGTCATCGGCACCTGGTTCTACGTGATGGATTGCGTCGAGGGACGGGTGC TCTGGGACCAGACCCTGCCGGCCTATTCCCCGGCCGAGCGCACCGCCATCTTCCGCGCCAAGATCAAGACCCTCGCCGAC CTGCACAACACCGACTACGTCAAGATCGGCCTGGAGAACTACGGCAAGCCCGGCAACTACATGGCCCGGCAGGTCGACCG CTGGACCAAGCAGTACAAGGCCTCGGAGGACCGCCACATCGAGGAGATGGAGCGGCTGATCGAGTGGCTGCCGCGCACTG TGCCGAACCAGGAGCGGACCTCGATCGTCCACGGCGACTACCGCCTCGACAACATGATCTTCCATCCGACCGAGCCGCGC GTGGCGGCGGTGCTGGACTGGGAGCTGTCGACCCTGGGCGAGCCGCTGGCCGACTTCACCTACCTGCTGATGAACTGGGT GAACGGCACGATCTCGCAGCTGCCCGACCTGAAGGCGCACGGCATCCCGACCATCGAGGAGGCGGTGGACTACTACTGCG AGCTGACCGGCCGCGACGGCCTGCCCGACCTCAACTGGTTCTTCTCGTACAACACCTTCCGTCTGGCCGGCATCGTCCAG GGCATCCTCGGGCGGGTGCGCGACGGCACCGCCAACCACCCGGACGCGGCCAGCATGGGCCCGCGGGTCCTGGCGCTGGC CCAGACCAGCTGGGAGTTCGCGAAGAAGGCCGGCGCCGGCTAG
Upstream 100 bases:
>100_bases CCGCTTCCTGACCTCAGGTCAAGCCCGCCCATCTCGCCTTGCCCCGCCGCCGCCGCCCTCGCTAAATAGGGTTCAAACAA CTGTACGAAGGGGAAGCGCC
Downstream 100 bases:
>100_bases AGGCCGCCCACCACGGCGTCCAAGGCCGCCTCGTCCTGGAAGACGGCCCGGACCGGCCAGGGCCGCACCCGCTCGCGCCA GGCGGGGGGCAGGCGGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MAVTADVAAEQEREKANTGTEAVPEAQRFDQASLERWLEANVEGYAGPLEVRKFKGGQSNPTYQLITPSQKYVLRRKPPG KLLPSAHAVDREYRVISALYPTGFPVARTYGLCQDDSVIGTWFYVMDCVEGRVLWDQTLPAYSPAERTAIFRAKIKTLAD LHNTDYVKIGLENYGKPGNYMARQVDRWTKQYKASEDRHIEEMERLIEWLPRTVPNQERTSIVHGDYRLDNMIFHPTEPR VAAVLDWELSTLGEPLADFTYLLMNWVNGTISQLPDLKAHGIPTIEEAVDYYCELTGRDGLPDLNWFFSYNTFRLAGIVQ GILGRVRDGTANHPDAASMGPRVLALAQTSWEFAKKAGAG
Sequences:
>Translated_360_residues MAVTADVAAEQEREKANTGTEAVPEAQRFDQASLERWLEANVEGYAGPLEVRKFKGGQSNPTYQLITPSQKYVLRRKPPG KLLPSAHAVDREYRVISALYPTGFPVARTYGLCQDDSVIGTWFYVMDCVEGRVLWDQTLPAYSPAERTAIFRAKIKTLAD LHNTDYVKIGLENYGKPGNYMARQVDRWTKQYKASEDRHIEEMERLIEWLPRTVPNQERTSIVHGDYRLDNMIFHPTEPR VAAVLDWELSTLGEPLADFTYLLMNWVNGTISQLPDLKAHGIPTIEEAVDYYCELTGRDGLPDLNWFFSYNTFRLAGIVQ GILGRVRDGTANHPDAASMGPRVLALAQTSWEFAKKAGAG >Mature_359_residues AVTADVAAEQEREKANTGTEAVPEAQRFDQASLERWLEANVEGYAGPLEVRKFKGGQSNPTYQLITPSQKYVLRRKPPGK LLPSAHAVDREYRVISALYPTGFPVARTYGLCQDDSVIGTWFYVMDCVEGRVLWDQTLPAYSPAERTAIFRAKIKTLADL HNTDYVKIGLENYGKPGNYMARQVDRWTKQYKASEDRHIEEMERLIEWLPRTVPNQERTSIVHGDYRLDNMIFHPTEPRV AAVLDWELSTLGEPLADFTYLLMNWVNGTISQLPDLKAHGIPTIEEAVDYYCELTGRDGLPDLNWFFSYNTFRLAGIVQG ILGRVRDGTANHPDAASMGPRVLALAQTSWEFAKKAGAG
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=347, Percent_Identity=44.6685878962536, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI211971008, Length=347, Percent_Identity=44.6685878962536, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI38505218, Length=346, Percent_Identity=42.7745664739884, Blast_Score=289, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17562446, Length=322, Percent_Identity=38.5093167701863, Blast_Score=239, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40604; Mature: 40473
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTADVAAEQEREKANTGTEAVPEAQRFDQASLERWLEANVEGYAGPLEVRKFKGGQSN CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCC PTYQLITPSQKYVLRRKPPGKLLPSAHAVDREYRVISALYPTGFPVARTYGLCQDDSVIG CCEEEECCCHHHHEECCCCCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHCCCCCCCCHHH TWFYVMDCVEGRVLWDQTLPAYSPAERTAIFRAKIKTLADLHNTDYVKIGLENYGKPGNY HHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCHHH MARQVDRWTKQYKASEDRHIEEMERLIEWLPRTVPNQERTSIVHGDYRLDNMIFHPTEPR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEECCEEECCEEECCCCCC VAAVLDWELSTLGEPLADFTYLLMNWVNGTISQLPDLKAHGIPTIEEAVDYYCELTGRDG EEEEEECCHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHEECCCCC LPDLNWFFSYNTFRLAGIVQGILGRVRDGTANHPDAASMGPRVLALAQTSWEFAKKAGAG CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEHHHHHHHHHCCCC >Mature Secondary Structure AVTADVAAEQEREKANTGTEAVPEAQRFDQASLERWLEANVEGYAGPLEVRKFKGGQSN CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCC PTYQLITPSQKYVLRRKPPGKLLPSAHAVDREYRVISALYPTGFPVARTYGLCQDDSVIG CCEEEECCCHHHHEECCCCCCCCCCHHHHCHHHHHHHHHCCCCCCHHHHCCCCCCCCHHH TWFYVMDCVEGRVLWDQTLPAYSPAERTAIFRAKIKTLADLHNTDYVKIGLENYGKPGNY HHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCHHH MARQVDRWTKQYKASEDRHIEEMERLIEWLPRTVPNQERTSIVHGDYRLDNMIFHPTEPR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEECCEEECCEEECCCCCC VAAVLDWELSTLGEPLADFTYLLMNWVNGTISQLPDLKAHGIPTIEEAVDYYCELTGRDG EEEEEECCHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHEECCCCC LPDLNWFFSYNTFRLAGIVQGILGRVRDGTANHPDAASMGPRVLALAQTSWEFAKKAGAG CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA